PLAČKOVÁ, Klára, Petr BUREŠ and František ZEDEK. Centromere Size Scales With Genome Size Across Eukaryotes. Scientific Reports. London: Nature Research, 2021, vol. 11, No 1, p. 19811-19817. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-021-99386-7.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name Centromere Size Scales With Genome Size Across Eukaryotes
Authors PLAČKOVÁ, Klára (203 Czech Republic, belonging to the institution), Petr BUREŠ (203 Czech Republic, belonging to the institution) and František ZEDEK (203 Czech Republic, guarantor, belonging to the institution).
Edition Scientific Reports, London, Nature Research, 2021, 2045-2322.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10602 Biology , Evolutionary biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.996
RIV identification code RIV/00216224:14310/21:00119242
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1038/s41598-021-99386-7
UT WoS 000706380800025
Keywords in English Eukaryotes; centromere size; CenH3; kinetochore size
Tags CF CELLIM, rivok
Tags International impact, Reviewed
Changed by Changed by: prof. RNDr. Petr Bureš, Ph.D., učo 2635. Changed: 6/1/2024 00:25.
Abstract
Previous studies on grass species suggested that the total centromere size (sum of all centromere sizes in a cell) may be determined by the genome size, possibly because stable scaling is important for proper cell division. However, it is unclear whether this relationship is universal. Here we analyze the total centromere size using the CenH3-immunofluorescence area as a proxy in 130 taxa including plants, animals, fungi, and protists. We verified the reliability of our methodological approach by comparing our measurements with available ChIP-seq-based measurements of the size of CenH3- binding domains. Data based on these two independent methods showed the same positive relationship between the total centromere size and genome size. Our results demonstrate that the genome size is a strong predictor (R-squared= 0.964) of the total centromere size universally across Eukaryotes. We also show that this relationship is independent of phylogenetic relatedness and centromere type (monocentric, metapolycentric, and holocentric), implying a common mechanism maintaining stable total centromere size in Eukaryotes.
Links
GA20-15989S, research and development projectName: Evoluce velikosti genomu - centromerický drajv v nové roli (Acronym: Centrogenomtah)
Investor: Czech Science Foundation
LM2018129, research and development projectName: Národní infrastruktura pro biologické a medicínské zobrazování Czech-BioImaging
Investor: Ministry of Education, Youth and Sports of the CR
PrintDisplayed: 24/7/2024 18:29