TAHERZADEH, Maryam, Mehrdad POURAYOUBI, Banafsheh Vahdani ALVIRI, Samad Shoghpour BAYRAQ, Maral ARIANI, Marek NEČAS, Michal DUŠEK, Václav EIGNER, Hadi Amiri RUDBARI, Giuseppe BRUNO, Teresa Mancilla PERCINO, Marco A. LEYVA-RAMÍREZ and Krishnan DAMODARAN. Hydrogen-bond directionality and symmetry in [C(O)NH](N)(2)P(O)-based structures: a comparison between X-ray crystallography data and neutron-normalized values, and evaluation of reliability. Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials. International Union of Crystallography, 2021, vol. 77, No 3, p. 384-396. ISSN 2052-5206. Available from: https://dx.doi.org/10.1107/S2052520621003371.
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Basic information
Original name Hydrogen-bond directionality and symmetry in [C(O)NH](N)(2)P(O)-based structures: a comparison between X-ray crystallography data and neutron-normalized values, and evaluation of reliability
Authors TAHERZADEH, Maryam, Mehrdad POURAYOUBI (guarantor), Banafsheh Vahdani ALVIRI, Samad Shoghpour BAYRAQ, Maral ARIANI, Marek NEČAS (203 Czech Republic, belonging to the institution), Michal DUŠEK, Václav EIGNER, Hadi Amiri RUDBARI, Giuseppe BRUNO, Teresa Mancilla PERCINO, Marco A. LEYVA-RAMÍREZ and Krishnan DAMODARAN.
Edition Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials, International Union of Crystallography, 2021, 2052-5206.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10406 Analytical chemistry
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 2.684
RIV identification code RIV/00216224:14310/21:00122973
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1107/S2052520621003371
UT WoS 000661270800012
Keywords in English phosphoric triamide; X-ray diffraction; neutron normalization; symmetry; Cambridge Structural Database; lone electron pair
Tags CF SAXS, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 24/11/2021 15:30.
Abstract
For [C(O)NH](N)2P(O)-based structures, the magnitude of the differences in the N—H⋯O, H⋯O=P and H⋯O=C angles has been evaluated when the N—H bond lengths, determined by X-ray diffraction, were compared to the neutron normalized values and the maximum percentage difference was obtained, i.e. about 3% for the angle even if the N—H bond lengths have a difference of about 30% (0.7 Å for the X-ray and 1.03 Å for the neutron-normalized value). The symmetries of the crystals are discussed with respect to the symmetry of the molecules, as well as to the symmetry of hydrogen-bonded motifs, and the role of the most directional hydrogen bond in raising the probability of obtaining centrosymmetric crystal structures is investigated. The work was performed by considering nine new X-ray crystal structures and 204 analogous structures retrieved from the Cambridge Structural Database.
Links
LM2018127, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii (Acronym: CIISB)
Investor: Ministry of Education, Youth and Sports of the CR
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