DUDOVÁ, Zdenka, Nathalie CONTE, Jeremy MASON, Dalibor STUCHLÍK, Radim PEŠA, Csaba HALMAGYI, Zinaida PEROVA, Abayomi MOSAKU, Ross THORNE, Alex FOLLETTE, Ľuboslav PIVARČ, Radim ŠAŠINKA, Muhammad USMAN, Steven NEUHAUSER, Dale A BEGLEY, Debra M KRUPKE, Massimiliano FRASSÀ, Alessandro FIORI, Riccardo CORSI, Luca VEZZADINI, Claudio ISELLA, Andrea BERTOTTI, Carol BULT, Helen PARKINSON, Enzo MEDICO, Terrence MEEHAN and Aleš KŘENEK. The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization. BMC Genomics. BioMed Central, 2022, vol. 23, No 1, p. 1-11. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-022-08367-1.
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Basic information
Original name The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization
Authors DUDOVÁ, Zdenka (203 Czech Republic, belonging to the institution), Nathalie CONTE (826 United Kingdom of Great Britain and Northern Ireland), Jeremy MASON (826 United Kingdom of Great Britain and Northern Ireland), Dalibor STUCHLÍK (203 Czech Republic, belonging to the institution), Radim PEŠA (203 Czech Republic, belonging to the institution), Csaba HALMAGYI (826 United Kingdom of Great Britain and Northern Ireland), Zinaida PEROVA (826 United Kingdom of Great Britain and Northern Ireland), Abayomi MOSAKU (826 United Kingdom of Great Britain and Northern Ireland), Ross THORNE (826 United Kingdom of Great Britain and Northern Ireland), Alex FOLLETTE (826 United Kingdom of Great Britain and Northern Ireland), Ľuboslav PIVARČ (703 Slovakia, belonging to the institution), Radim ŠAŠINKA (203 Czech Republic, belonging to the institution), Muhammad USMAN (586 Pakistan, belonging to the institution), Steven NEUHAUSER (840 United States of America), Dale A BEGLEY (840 United States of America), Debra M KRUPKE (840 United States of America), Massimiliano FRASSÀ (380 Italy), Alessandro FIORI (380 Italy), Riccardo CORSI (380 Italy), Luca VEZZADINI (380 Italy), Claudio ISELLA (380 Italy), Andrea BERTOTTI (380 Italy), Carol BULT (840 United States of America), Helen PARKINSON (826 United Kingdom of Great Britain and Northern Ireland), Enzo MEDICO (380 Italy), Terrence MEEHAN (826 United Kingdom of Great Britain and Northern Ireland) and Aleš KŘENEK (203 Czech Republic, guarantor, belonging to the institution).
Edition BMC Genomics, BioMed Central, 2022, 1471-2164.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10201 Computer sciences, information science, bioinformatics
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.400
RIV identification code RIV/00216224:14610/22:00125440
Organization unit Institute of Computer Science
Doi http://dx.doi.org/10.1186/s12864-022-08367-1
UT WoS 000759579300005
Keywords in English PDX Molecular data analysis; Data harmonization; Research infrastructure; Database
Tags International impact, Reviewed
Changed by Changed by: Mgr. Alena Mokrá, učo 362754. Changed: 15/3/2023 12:10.
Abstract
Patient-derived xenografts (PDX) mice models play an important role in preclinical trials and personalized medicine. Sharing data on the models is highly valuable for numerous reasons – ethical, economical, research cross validation etc. The EurOPDX Consortium was established 8 years ago to share such information and avoid duplicating efforts in developing new PDX mice models and unify approaches to support preclinical research. EurOPDX Data Portal is the unified data sharing platform adopted by the Consortium.
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