J 2022

The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization

DUDOVÁ, Zdenka, Nathalie CONTE, Jeremy MASON, Dalibor STUCHLÍK, Radim PEŠA et. al.

Basic information

Original name

The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization

Authors

DUDOVÁ, Zdenka (203 Czech Republic, belonging to the institution), Nathalie CONTE (826 United Kingdom of Great Britain and Northern Ireland), Jeremy MASON (826 United Kingdom of Great Britain and Northern Ireland), Dalibor STUCHLÍK (203 Czech Republic, belonging to the institution), Radim PEŠA (203 Czech Republic, belonging to the institution), Csaba HALMAGYI (826 United Kingdom of Great Britain and Northern Ireland), Zinaida PEROVA (826 United Kingdom of Great Britain and Northern Ireland), Abayomi MOSAKU (826 United Kingdom of Great Britain and Northern Ireland), Ross THORNE (826 United Kingdom of Great Britain and Northern Ireland), Alex FOLLETTE (826 United Kingdom of Great Britain and Northern Ireland), Ľuboslav PIVARČ (703 Slovakia, belonging to the institution), Radim ŠAŠINKA (203 Czech Republic, belonging to the institution), Muhammad USMAN (586 Pakistan, belonging to the institution), Steven NEUHAUSER (840 United States of America), Dale A BEGLEY (840 United States of America), Debra M KRUPKE (840 United States of America), Massimiliano FRASSÀ (380 Italy), Alessandro FIORI (380 Italy), Riccardo CORSI (380 Italy), Luca VEZZADINI (380 Italy), Claudio ISELLA (380 Italy), Andrea BERTOTTI (380 Italy), Carol BULT (840 United States of America), Helen PARKINSON (826 United Kingdom of Great Britain and Northern Ireland), Enzo MEDICO (380 Italy), Terrence MEEHAN (826 United Kingdom of Great Britain and Northern Ireland) and Aleš KŘENEK (203 Czech Republic, guarantor, belonging to the institution)

Edition

BMC Genomics, BioMed Central, 2022, 1471-2164

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10201 Computer sciences, information science, bioinformatics

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

Impact factor

Impact factor: 4.400

RIV identification code

RIV/00216224:14610/22:00125440

Organization unit

Institute of Computer Science

UT WoS

000759579300005

Keywords in English

PDX Molecular data analysis; Data harmonization; Research infrastructure; Database

Tags

International impact, Reviewed
Změněno: 15/3/2023 12:10, Mgr. Alena Mokrá

Abstract

V originále

Patient-derived xenografts (PDX) mice models play an important role in preclinical trials and personalized medicine. Sharing data on the models is highly valuable for numerous reasons – ethical, economical, research cross validation etc. The EurOPDX Consortium was established 8 years ago to share such information and avoid duplicating efforts in developing new PDX mice models and unify approaches to support preclinical research. EurOPDX Data Portal is the unified data sharing platform adopted by the Consortium.