J 2022

The Clinical Genome Resource (ClinGen) Familial Hypercholesterolemia Variant Curation Expert Panel consensus guidelines for LDLR variant classification

CHORA, J. R.; M. A. IACOCCA; Lukas TICHÝ; H. WAND; C. L. KURTZ et. al.

Základní údaje

Originální název

The Clinical Genome Resource (ClinGen) Familial Hypercholesterolemia Variant Curation Expert Panel consensus guidelines for LDLR variant classification

Autoři

CHORA, J. R.; M. A. IACOCCA; Lukas TICHÝ; H. WAND; C. L. KURTZ; H. ZIMMERMANN; A. LEON; M. WILLIAMS; C. L. HUMPHRIES; A. J. HOOPER; M. TRINDER; L. R. BRUNHAM; A. COSTA PEREIRA; C. E. JANNES; M. CHEN; J. CHONIS; J. WANG; S. KIM; T. JOHNSTON; Přemysl SOUČEK; Michal KRAMÁREK; S. E LEIGH.; A. CARRIÉ; E. J. SIJBRANDS; R. A HEGELE.; Tomáš FREIBERGER ORCID; J. W. KNOWLES a M. BOURBON

Vydání

Genetics In Medicine, United States, Lippincott, Williams & Wilkins, 2022, 1098-3600

Další údaje

Jazyk

angličtina

Typ výsledku

Článek v odborném periodiku

Obor

30101 Human genetics

Stát vydavatele

Spojené státy

Utajení

není předmětem státního či obchodního tajemství

Odkazy

URL

Impakt faktor

Impact factor: 8.800

Kód RIV

RIV/00216224:14110/22:00126147

Organizační jednotka

Lékařská fakulta

DOI

https://doi.org/10.1016/j.gim.2021.09.012

UT WoS

000797597400004

EID Scopus

2-s2.0-85123878017

Klíčová slova anglicky

ACMG/AMP; ClinGen; Familial hypercholesterolemia; LDLR; Variant classification

Štítky

14110114, rivok

Příznaky

Mezinárodní význam, Recenzováno
Změněno: 28. 6. 2022 09:22, Mgr. Tereza Miškechová

Anotace

V originále

Purpose: In 2015, the American College of Medical Genetics and Genomics (ACMG) and the Association for Molecular Pathology (AMP) published consensus standardized guidelines for sequence-level variant classification in Mendelian disorders. To increase accuracy and consistency, the Clinical Genome Resource Familial Hypercholesterolemia (FH) Variant Curation Expert Panel was tasked with optimizing the existing ACMG/AMP framework for disease-specific classification in FH. In this study, we provide consensus recommendations for the most common FH-associated gene, LDLR, where >2300 unique FH-associated variants have been identified. Methods: The multidisciplinary FH Variant Curation Expert Panel met in person and through frequent emails and conference calls to develop LDLR-specific modifications of ACMG/AMP guidelines. Through iteration, pilot testing, debate, and commentary, consensus among experts was reached. Results: The consensus LDLR variant modifications to existing ACMG/AMP guidelines include (1) alteration of population frequency thresholds, (2) delineation of loss-of-function variant types, (3) functional study criteria specifications, (4) cosegregation criteria specifications, and (5) specific use and thresholds for in silico prediction tools, among others. Conclusion: Establishment of these guidelines as the new standard in the clinical laboratory setting will result in a more evidence-based, harmonized method for LDLR variant classification worldwide, thereby improving the care of patients with FH. (C) 2021 American College of Medical Genetics and Genomics.
Zobrazeno: 29. 11. 2025 13:47