LIU, I., L. JIANG, E. R. SAMUELSSON, S. MARCO SALAS, A. BECK, O. A. HACK, D. JEONG, M. L. SHAW, B. ENGLINGER, J. LABELLE, H. M. MIRE, S. MADLENER, L. MAYR, M. A. QUEZADA, M. TRISSAL, E. PANDITHARATNA, K. J. ERNST, J. VOGELZANG, T. A. GATESMAN, M. E. HALBERT, Hana PÁLOVÁ, Petra POKORNÁ, Jaroslav ŠTĚRBA, Ondřej SLABÝ, R. GEYEREGGER, A. DIAZ, I. J. FINDLAY, M. D. DUN, A. RESNICK, M. L SUVÀ., D. T. W. JONES, S. AGNIHOTRI, J. SVEDLUND, C. KOSCHMANN, C. HABERLER, T. CZECH, I. SLAVC, J. A. COTTER, K. L. LIGON, S. ALEXANDRESCU, W. K. A. YUNG, I. ARRILLAGA-ROMANY, J. GOJO, M. MONJE, M. NILSSON and M. G. FILBIN. The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location. Nature Genetics. BERLIN: NATURE PORTFOLIO, 2022, vol. 54, December 2022, p. 1881-1894. ISSN 1061-4036. Available from: https://dx.doi.org/10.1038/s41588-022-01236-3.
Other formats:   BibTeX LaTeX RIS
Basic information
Original name The landscape of tumor cell states and spatial organization in H3-K27M mutant diffuse midline glioma across age and location
Authors LIU, I. (guarantor), L. JIANG, E. R. SAMUELSSON, S. MARCO SALAS, A. BECK, O. A. HACK, D. JEONG, M. L. SHAW, B. ENGLINGER, J. LABELLE, H. M. MIRE, S. MADLENER, L. MAYR, M. A. QUEZADA, M. TRISSAL, E. PANDITHARATNA, K. J. ERNST, J. VOGELZANG, T. A. GATESMAN, M. E. HALBERT, Hana PÁLOVÁ (203 Czech Republic, belonging to the institution), Petra POKORNÁ (203 Czech Republic, belonging to the institution), Jaroslav ŠTĚRBA (203 Czech Republic, belonging to the institution), Ondřej SLABÝ (203 Czech Republic, belonging to the institution), R. GEYEREGGER, A. DIAZ, I. J. FINDLAY, M. D. DUN, A. RESNICK, M. L SUVÀ., D. T. W. JONES, S. AGNIHOTRI, J. SVEDLUND, C. KOSCHMANN, C. HABERLER, T. CZECH, I. SLAVC, J. A. COTTER, K. L. LIGON, S. ALEXANDRESCU, W. K. A. YUNG, I. ARRILLAGA-ROMANY, J. GOJO, M. MONJE, M. NILSSON and M. G. FILBIN.
Edition Nature Genetics, BERLIN, NATURE PORTFOLIO, 2022, 1061-4036.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 30204 Oncology
Country of publisher Germany
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 30.800
RIV identification code RIV/00216224:14110/22:00127554
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1038/s41588-022-01236-3
UT WoS 000920296200009
Keywords in English Ageing; Cancer microenvironment; CNS cancer; Transcriptomics
Tags 14110321, 14110513, podil, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Tereza Miškechová, učo 341652. Changed: 20/3/2023 09:17.
Abstract
Histone 3 lysine27-to-methionine (H3-K27M) mutations most frequently occur in diffuse midline gliomas (DMGs) of the childhood pons but are also increasingly recognized in adults. Their potential heterogeneity at different ages and midline locations is vastly understudied. Here, through dissecting the single-cell transcriptomic, epigenomic and spatial architectures of a comprehensive cohort of patient H3-K27M DMGs, we delineate how age and anatomical location shape glioma cell-intrinsic and -extrinsic features in light of the shared driver mutation. We show that stem-like oligodendroglial precursor-like cells, present across all clinico-anatomical groups, display varying levels of maturation dependent on location. We reveal a previously underappreciated relationship between mesenchymal cancer cell states and age, linked to age-dependent differences in the immune microenvironment. Further, we resolve the spatial organization of H3-K27M DMG cell populations and identify a mitotic oligodendroglial-lineage niche. Collectively, our study provides a powerful framework for rational modeling and therapeutic interventions.
Links
LX22NPO5102, research and development projectName: Národní ústav pro výzkum rakoviny (Acronym: NÚVR)
Investor: Ministry of Education, Youth and Sports of the CR, National institute for cancer research, 5.1 EXCELES
MUNI/A/1427/2021, interní kód MUName: Personalizovaná léčba v dětské onkologii: na cestě k „liquid dynamic medicine“ a „N-of-1 clinical trials“
Investor: Masaryk University
NU20-03-00240, research and development projectName: Celoexomové sekvenování, sekvenování genomu s nízkým pokrytím a transkriptomu pro účely precizní onkologie u dětských pacientů s vysoce rizikovými a relabovanými solidními nádory
Investor: Ministry of Health of the CR, Whole exome, low-coverage genome and transcriptome sequencing as tools for precision oncology in paediatric patients with high-risk and relapsed solid tumors, Subprogram 1 - standard
Type Name Uploaded/Created by Uploaded/Created Rights
The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf Licence Creative Commons  File version Miškechová, T. 21/12/2022

Properties

Address within IS
https://is.muni.cz/auth/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf
Address for the users outside IS
https://is.muni.cz/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf
Address within Manager
https://is.muni.cz/auth/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf?info
Address within Manager for the users outside IS
https://is.muni.cz/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf?info
Uploaded/Created
Wed 21/12/2022 10:16, Mgr. Tereza Miškechová

Rights

Right to read
  • anyone on the Internet
  • a concrete person Mgr. Hana Pálová, Ph.D., učo 215025
  • a concrete person Mgr. Tereza Miškechová, učo 341652
  • a concrete person prof. MUDr. Jaroslav Štěrba, Ph.D., učo 348
  • a concrete person prof. RNDr. Ondřej Slabý, Ph.D., učo 42891
  • a concrete person Mgr. Petra Pokorná, učo 437141
Right to upload
 
Right to administer:
  • a concrete person Mgr. Tereza Miškechová, učo 341652
Attributes
 

The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf

Application
Open the file
Download file.
Address within IS
https://is.muni.cz/auth/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf
Address for the users outside IS
https://is.muni.cz/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.pdf
File type
PDF (application/pdf)
Size
28,6 MB
Hash md5
6e6b28e1f2f083a61f75ae6652d88bd0
Uploaded/Created
Wed 21/12/2022 10:16

The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio_Archive.pdf

Application
Open the file
Download file.
Address within IS
https://is.muni.cz/auth/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio_Archive.pdf
Address for the users outside IS
https://is.muni.cz/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio_Archive.pdf
File type
PDF/A (application/x-pdf)
Size
39,7 MB
Hash md5
b6a9ace4f7b13caa22ca4ac3577b138b
Uploaded/Created
Wed 21/12/2022 10:34

The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.txt

Application
Open the file
Download file.
Address within IS
https://is.muni.cz/auth/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.txt
Address for the users outside IS
https://is.muni.cz/publication/2241228/The_landscape_of_tumor_cell_states_and_spatial_organization_in_H3-K27M_mutant_diffuse_midline_glioma_across_age_and_locatio.txt
File type
plain text (text/plain)
Size
206,8 KB
Hash md5
e820a45f18a2027b5fb96e957d72ed6c
Uploaded/Created
Wed 21/12/2022 10:35
Print
Report a file uploaded without authorization. Displayed: 12/9/2024 07:19