LUKJANOVÁ, Eliška, Alžběta HANULÍKOVÁ and Jana ŘEPKOVÁ. Investigating the Origin and Evolution of Polyploid Trifolium medium L. Karyotype by Comparative Cytogenomic Methods. Plants. MDPI, 2023, vol. 12, No 2, p. 1-21. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants12020235.
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Basic information
Original name Investigating the Origin and Evolution of Polyploid Trifolium medium L. Karyotype by Comparative Cytogenomic Methods
Authors LUKJANOVÁ, Eliška (203 Czech Republic, belonging to the institution), Alžběta HANULÍKOVÁ (203 Czech Republic, belonging to the institution) and Jana ŘEPKOVÁ (203 Czech Republic, guarantor, belonging to the institution).
Edition Plants, MDPI, 2023, 2223-7747.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10611 Plant sciences, botany
Country of publisher Switzerland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.500 in 2022
RIV identification code RIV/00216224:14310/23:00130145
Organization unit Faculty of Science
Doi http://dx.doi.org/10.3390/plants12020235
UT WoS 000918644200001
Keywords in English clover; zigzag clover; fluorescent in situ hybridization; 5S rDNA; 26S rDNA; centromeric repeat; polyploidy
Tags rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 16/2/2023 12:01.
Abstract
Trifolium medium L. is a wild polyploid relative of the agriculturally important red clover that possesses traits promising for breeding purposes. To date, T. medium also remains the only clover species with which agriculturally important red clover has successfully been hybridized. Even though allopolyploid origin has previously been suggested, little has in fact been known about the T. medium karyotype and its origin. We researched T. medium and related karyotypes using comparative cytogenomic methods, such as fluorescent in situ hybridization (FISH) and RepeatExplorer cluster analysis. The results indicate an exceptional karyotype diversity regarding numbers and mutual positions of 5S and 26S rDNA loci and centromeric repeats in populations of T. medium ecotypes and varieties. The observed variability among T. medium ecotypes and varieties suggests current karyotype instability that can be attributed to ever-ongoing battle between satellite DNA together with genomic changes and rearrangements enhanced by post-hybridization events. Comparative cytogenomic analyses of a T. medium hexaploid variety and diploid relatives revealed stable karyotypes with a possible case of chromosomal rearrangement. Moreover, the results provided evidence of T. medium having autopolyploid origin.
Links
MUNI/A/1325/2021, interní kód MUName: Podpora výzkumné činnosti studentů molekulární biologie a genetiky 10 (Acronym: MBG10)
Investor: Masaryk University
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