NEŠPOR DADEJOVÁ, Martina, Michal FRANEK and Martina DVOŘÁČKOVÁ. Laser microirradiation as a versatile system for probing protein recruitment and protein-protein interactions at DNA lesions in plants. New Phytologist. Blackwell Science, 2022, vol. 234, No 5, p. 1891-1900. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18086.
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Basic information
Original name Laser microirradiation as a versatile system for probing protein recruitment and protein-protein interactions at DNA lesions in plants
Authors NEŠPOR DADEJOVÁ, Martina (203 Czech Republic, belonging to the institution), Michal FRANEK (703 Slovakia, belonging to the institution) and Martina DVOŘÁČKOVÁ (203 Czech Republic, guarantor, belonging to the institution).
Edition New Phytologist, Blackwell Science, 2022, 0028-646X.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10611 Plant sciences, botany
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 9.400
RIV identification code RIV/00216224:14740/22:00127898
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1111/nph.18086
UT WoS 000785919300001
Keywords in English Arabidopsis; BiFC; DNA damage; DNA repair; microirradiation; PCNA; protoplasts
Tags CF CELLIM, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 11/1/2023 16:59.
Abstract
Plant protoplasts are generated by treatment with digestion enzymes, producing plant cells devoid of the cell wall and competent for efficient polyethylene glycol mediated transformation. This way fluorescently tagged proteins can be introduced to the protoplasts creating an excellent system to probe the localization and function of uncharacterized plant proteins in vivo. We implement the method of laser microirradiation to generate DNA lesions in Arabidopsis thaliana, which enables monitoring the recruitment and dynamics of the DNA repair factors as well as bimolecular fluorescence complementation assay to test transient, conditional interactions of proteins directly at sites of DNA damage. We demonstrate that laser microirradiation in protoplasts yields a physiological cellular response to DNA lesions, based on proliferating cell nuclear antigen (PCNA) redistribution in the nucleus and show that factors involved in DNA repair, such as MRE11 or PCNA are recruited to induced DNA lesions. This technique is relatively easy to adopt by other laboratories and extends the current toolkit of methods aimed to understand the details of DNA damage response in plants. The presented method is fast, flexible and facilitates work with different mutant backgrounds or even different species, extending the utility of the system.
Links
EF16_026/0008446, research and development projectName: Integrace signálu a epigenetické reprogramování pro produktivitu rostlin
GJ19-11880Y, research and development projectName: Chromatinové prostředí indukované genotoxickými látkami
Investor: Czech Science Foundation, Chromatin environment induced by genotoxic agents
LM2018129, research and development projectName: Národní infrastruktura pro biologické a medicínské zobrazování Czech-BioImaging
Investor: Ministry of Education, Youth and Sports of the CR
LTC18048, research and development projectName: Prostorové uspořádání významných jaderných domén a jejich proteinových složek
Investor: Ministry of Education, Youth and Sports of the CR, Spatial organisation of key nuclear domains and their protein components, INTER-COST
LTC20003, research and development projectName: Dynamics of telomeres and rDNA loci in plant cell nuclei
Investor: Ministry of Education, Youth and Sports of the CR, INTER-COST
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