ZAPLETAL, David, Eliska TABORSKA, Josef PASULKA, Radek MALIK, Karel KUBÍČEK, Martina ZÁNOVÁ, Christian MUCH, Marek ŠEBESTA, Valeria BUCCHERI, Filip HORVAT, Irena JENICKOVA, Michaela PROCHAZKOVA, Jan PROCHAZKA, Matyáš PINKAS, Jiří NOVÁČEK, Diego F JOSEPH, Radislav SEDLACEK, Carrie BERNECKY, Donal CARROLL, Richard ŠTEFL and Petr SVOBODA. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. CAMBRIDGE: CELL PRESS, 2022, vol. 82, No 21, p. 4064-4079. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2022.10.010.
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Basic information
Original name Structural and functional basis of mammalian microRNA biogenesis by Dicer
Authors ZAPLETAL, David (203 Czech Republic, belonging to the institution), Eliska TABORSKA, Josef PASULKA, Radek MALIK, Karel KUBÍČEK (203 Czech Republic, belonging to the institution), Martina ZÁNOVÁ (703 Slovakia, belonging to the institution), Christian MUCH, Marek ŠEBESTA (703 Slovakia, belonging to the institution), Valeria BUCCHERI, Filip HORVAT, Irena JENICKOVA, Michaela PROCHAZKOVA, Jan PROCHAZKA, Matyáš PINKAS (203 Czech Republic, belonging to the institution), Jiří NOVÁČEK (203 Czech Republic, belonging to the institution), Diego F JOSEPH, Radislav SEDLACEK, Carrie BERNECKY, Donal CARROLL, Richard ŠTEFL (203 Czech Republic, guarantor, belonging to the institution) and Petr SVOBODA.
Edition Molecular Cell, CAMBRIDGE, CELL PRESS, 2022, 1097-2765.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10608 Biochemistry and molecular biology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 16.000
RIV identification code RIV/00216224:14740/22:00128561
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1016/j.molcel.2022.10.010
UT WoS 000898565300011
Keywords in English CRYO-EM STRUCTUREGUIDE STRAND SELECTIONRNA-BINDINGSTRUCTURE VALIDATIONTRBP COMPLEXMOUSEEXPRESSIONMOLPROBITYSPECIFICITYRECOGNITION
Tags CF BioData, CF CRYO, CF PROT, rivok
Changed by Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 26/2/2023 20:32.
Abstract
MicroRNA (miRNA) and RNA interference (RNAi) pathways rely on small RNAs produced by Dicer endonucle-ases. Mammalian Dicer primarily supports the essential gene-regulating miRNA pathway, but how it is spe-cifically adapted to miRNA biogenesis is unknown. We show that the adaptation entails a unique structural role of Dicer???s DExD/H helicase domain. Although mice tolerate loss of its putative ATPase function, the com-plete absence of the domain is lethal because it assures high-fidelity miRNA biogenesis. Structures of murine Dicerd???miRNA precursor complexes revealed that the DExD/H domain has a helicase-unrelated structural function. It locks Dicer in a closed state, which facilitates miRNA precursor selection. Transition to a cleav-age-competent open state is stimulated by Dicer-binding protein TARBP2. Absence of the DExD/H domain or its mutations unlocks the closed state, reduces substrate selectivity, and activates RNAi. Thus, the DExD/H domain structurally contributes to mammalian miRNA biogenesis and underlies mechanistical partitioning of miRNA and RNAi pathways.
Links
EF19_073/0016943, research and development projectName: Interní grantová agentura Masarykovy univerzity
GA22-19896S, research and development projectName: Strukturní podstata pro opětovné sestavení nukleosomu při přepisu genu zprostředkovaná proteinem Spt6
Investor: Czech Science Foundation, Structural basis for co-transcriptional nucleosome reassembly mediated by Spt6
LM2018127, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii (Acronym: CIISB)
Investor: Ministry of Education, Youth and Sports of the CR
LM2018131, research and development projectName: Česká národní infrastruktura pro biologická data (Acronym: ELIXIR-CZ)
Investor: Ministry of Education, Youth and Sports of the CR, Czech National Infrastructure for Biological Data
LQ1601, research and development projectName: CEITEC 2020 (Acronym: CEITEC2020)
Investor: Ministry of Education, Youth and Sports of the CR
649030, interní kód MUName: DECOR - Dynamic assembly and exchange of RNA polymerase II CTD factors (Acronym: DECOR)
Investor: European Union, DECOR, ERC (Excellent Science)
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