| LAMOTHE, Lucie, Jennifer R B JENSEN, Hans IENASESCU, Ove J R GUSTAFSSON, Alban GAIGNARD, Dmitry REPCHEVSKY, Radka SVOBODOVÁ, Tomáš RAČEK, Adrián ROŠINEC, Matej ANTOL and Hervé MÉNAGER. An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems. BioHackrXiv. 2023, p. 1-10. Available from: https://dx.doi.org/10.37044/osf.io/79kje. |
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@article{2293251,
author = {Lamothe, Lucie and Jensen, Jennifer R B and Ienasescu, Hans and Gustafsson, Ove J R and Gaignard, Alban and Repchevsky, Dmitry and Svobodová, Radka and Raček, Tomáš and Rošinec, Adrián and Antol, Matej and Ménager, Hervé},
doi = {http://dx.doi.org/10.37044/osf.io/79kje},
keywords = {metadata; Tools Ecosystem; Galaxy workflows},
language = {eng},
journal = {BioHackrXiv},
title = {An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems.},
url = {https://osf.io/preprints/biohackrxiv/79kje},
year = {2023}
}
TY - JFULL
ID - 2293251
AU - Lamothe, Lucie - Jensen, Jennifer R B - Ienasescu, Hans - Gustafsson, Ove J R - Gaignard, Alban - Repchevsky, Dmitry - Svobodová, Radka - Raček, Tomáš - Rošinec, Adrián - Antol, Matej - Ménager, Hervé
PY - 2023
TI - An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems.
JF - BioHackrXiv
SP - 1-10
EP - 1-10
KW - metadata
KW - Tools Ecosystem
KW - Galaxy workflows
UR - https://osf.io/preprints/biohackrxiv/79kje
N2 - Here we report the results of a project started at the BioHackathon Europe 2022. Its goals were to cross-compare and analyze the metadata centralized in the Tools Ecosystem, and linked to the EDAM ontology, as well as to explore methods for connecting tools used in registered Galaxy workflows (i.e. WorkflowHub entries) to the annotations available in bio.tools.
ER -
LAMOTHE, Lucie, Jennifer R B JENSEN, Hans IENASESCU, Ove J R GUSTAFSSON, Alban GAIGNARD, Dmitry REPCHEVSKY, Radka SVOBODOVÁ, Tomáš RAČEK, Adrián ROŠINEC, Matej ANTOL and Hervé MÉNAGER. An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems. \textit{BioHackrXiv}. 2023, p.~1-10. Available from: https://dx.doi.org/10.37044/osf.io/79kje.
|
