KONEČNÁ, Eva, Petra VÍDEŇSKÁ, Lucie BUREŠOVÁ, Milan URÍK, Soňa SMETANOVÁ, Stanislav SMATANA, Roman PROKEŠ, Barbara LÁNÍČKOVÁ, Eva BUDINSKÁ, Jana KLÁNOVÁ and Petra BOŘILOVÁ LINHARTOVÁ. Enrichment of human nasopharyngeal bacteriome with bacteria from dust after short-term exposure to indoor environment: a pilot study. BMC Microbiology. London: BioMed Central, 2023, vol. 23, No 1, p. 1-16. ISSN 1471-2180. Available from: https://dx.doi.org/10.1186/s12866-023-02951-5.
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Basic information
Original name Enrichment of human nasopharyngeal bacteriome with bacteria from dust after short-term exposure to indoor environment: a pilot study
Authors KONEČNÁ, Eva (203 Czech Republic, belonging to the institution), Petra VÍDEŇSKÁ (203 Czech Republic, belonging to the institution), Lucie BUREŠOVÁ (203 Czech Republic, belonging to the institution), Milan URÍK (703 Slovakia, belonging to the institution), Soňa SMETANOVÁ (203 Czech Republic, belonging to the institution), Stanislav SMATANA (703 Slovakia, belonging to the institution), Roman PROKEŠ (203 Czech Republic, belonging to the institution), Barbara LÁNÍČKOVÁ (203 Czech Republic, belonging to the institution), Eva BUDINSKÁ (703 Slovakia, belonging to the institution), Jana KLÁNOVÁ (203 Czech Republic, belonging to the institution) and Petra BOŘILOVÁ LINHARTOVÁ (203 Czech Republic, guarantor, belonging to the institution).
Edition BMC Microbiology, London, BioMed Central, 2023, 1471-2180.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10606 Microbiology
Country of publisher United Kingdom of Great Britain and Northern Ireland
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 4.200 in 2022
RIV identification code RIV/00216224:14310/23:00131440
Organization unit Faculty of Science
Doi http://dx.doi.org/10.1186/s12866-023-02951-5
UT WoS 001040951200002
Keywords in English Bacteriome; Dust; Nasopharynx; Household; Hospital; Sequencing; 16S rRNA; Exposure; Indoor environment
Tags 14110319, podil, rivok
Tags International impact, Reviewed
Changed by Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 8/3/2024 11:56.
Abstract
BackgroundIndoor dust particles are an everyday source of human exposure to microorganisms and their inhalation may directly affect the microbiota of the respiratory tract. We aimed to characterize the changes in human nasopharyngeal bacteriome after short-term exposure to indoor (workplace) environments.MethodsIn this pilot study, nasopharyngeal swabs were taken from 22 participants in the morning and after 8 h of their presence at the workplace. At the same time points, indoor dust samples were collected from the participants' households (16 from flats and 6 from houses) and workplaces (8 from a maternity hospital - NEO, 6 from a pediatric hospital - ENT, and 8 from a research center - RCX). 16S rRNA sequencing analysis was performed on these human and environmental matrices.ResultsStaphylococcus and Corynebacterium were the most abundant genera in both indoor dust and nasopharyngeal samples. The analysis indicated lower bacterial diversity in indoor dust samples from flats compared to houses, NEO, ENT, and RCX (p < 0.05). Participants working in the NEO had the highest nasopharyngeal bacterial diversity of all groups (p < 0.05). After 8 h of exposure to the workplace environment, enrichment of the nasopharynx with several new bacterial genera present in the indoor dust was observed in 76% of study participants; however, no significant changes were observed at the level of the nasopharyngeal bacterial diversity (p > 0.05, Shannon index). These "enriching" bacterial genera overlapped between the hospital workplaces - NEO and ENT but differed from those in the research center - RCX.ConclusionsThe results suggest that although the composition of nasopharyngeal bacteriome is relatively stable during the day. Short-term exposure to the indoor environment can result in the enrichment of the nasopharynx with bacterial DNA from indoor dust; the bacterial composition, however, varies by the indoor workplace environment.
Links
EF15_003/0000469, research and development projectName: Cetocoen Plus
EF17_043/0009632, research and development projectName: CETOCOEN Excellence
EF19_073/0016943, research and development projectName: Interní grantová agentura Masarykovy univerzity
GA22-32743S, research and development projectName: Propojení složení chemických látek a mikrobiomu v domácím prachu s environmentálními parametry
Investor: Czech Science Foundation
LM2018132, research and development projectName: Národní centrum lékařské genomiky (Acronym: NCLG)
Investor: Ministry of Education, Youth and Sports of the CR, National Center for Medical Genomics
LM2023069, research and development projectName: Výzkumná infrastruktura RECETOX
Investor: Ministry of Education, Youth and Sports of the CR, RECETOX research infrastructure
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  • a concrete person doc. RNDr. Petra Bořilová Linhartová, Ph.D., MBA, učo 106107
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  • a concrete person Mgr. Petra Vídeňská, Ph.D., učo 184485
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  • a concrete person RNDr. Roman Prokeš, Ph.D., učo 63848
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