p 2023

AI in cancer research: from histology to personalized medicine

KOVAČOVICOVÁ, Petra and Petr VAŇHARA

Basic information

Original name

AI in cancer research: from histology to personalized medicine

Authors

KOVAČOVICOVÁ, Petra (703 Slovakia) and Petr VAŇHARA (203 Czech Republic, belonging to the institution)

Edition

BIOCEV Regeneration III, 2023

Other information

Language

English

Type of outcome

Vyžádané přednášky

Field of Study

30402 Technologies involving the manipulation of cells, tissues, organs or the whole organism

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

RIV identification code

RIV/00216224:14110/23:00134676

Organization unit

Faculty of Medicine

Keywords in English

artificial intelligence; miachine learning; pancreatic cancer; biotechnology
Změněno: 24/11/2023 07:39, doc. RNDr. Petr Vaňhara, Ph.D.

Abstract

V originále

Artificial intelligence (AI) is becoming an inevitable part of a modern world medicine and biomedical industry that is becoming more and more digital. AI can analyze huge amounts of data, uncovering invisible patterns, speeding up processes and improving performance in many areas. Moreover, thanks to the process of continuous learning and thanks to updates, AI has an amazing capacity for continuous improvement. In histopathology, AI methods are mainly used in diagnosing diseases and designing treatment plans. They can be used, for example, for automatic classification in diagnosis, prediction of patient survival and response to treatment, segmentation, object detection, and analysis of microscope images[1]. AI methods are often used as a helpful screening tool, predicting the presence or absence of cancer. For example, Wang et al. developed a model that can discriminate between patients with pancreatic ductal adenocarcinoma (PDAC) and healthy controls with 86.74% accuracy[2]. Sohn et al. developed a different AI algorithm that can classify these patients with accuracy 91.00%[3]. Lee et al. used AI to create a model for predicting postoperative survival in PDAC patients. The AUC of the model for predicting 2-year overall survival in the test dataset was 0.76 and 1-year recurrence-free survival 0.74[4]. These results show that the use of AI in histology is promising and can significantly improve the diagnosis and prediction of patient survival. Supported by Ministry of Health of the Czech Republic, grant nr. NU23-08-00241 and by Masaryk University, project nr. MUNI/A/1301/2022. [1] S. Försch, F. Klauschen, P. Hufnagl, and W. Roth, “Artificial Intelligence in Pathology,” Dtsch Arztebl Int, vol. 118, no. 12, pp. 194–204, Mar. 2021, doi: 10.3238/arztebl.m2021.0011. [2] G. Wang et al., “Metabolic detection and systems analyses of pancreatic ductal adenocarcinoma through machine learning, lipidomics, and multi-omics,” Sci Adv, vol. 7, no. 52, p. eabh2724, doi: 10.1126/sciadv.abh2724. [3] A. Sohn et al., “A deep learning model to triage and predict adenocarcinoma on pancreas cytology whole slide imaging,” Sci Rep, vol. 13, p. 16517, Oct. 2023, doi: 10.1038/s41598-023-42045-w. [4] W. Lee et al., “Preoperative data-based deep learning model for predicting postoperative survival in pancreatic cancer patients,” Int J Surg, vol. 105, p. 106851, Sep. 2022, doi: 10.1016/j.ijsu.2022.106851.

Links

MUNI/A/1301/2022, interní kód MU
Name: Zdroje pro tkáňové inženýrství 13
Investor: Masaryk University
NU23-08-00241, research and development project
Name: Vývoj ex-vivo buněčných modelů pro adenokarcinom pankreatu: markery a cíle pro precizní medicínu
Investor: Ministry of Health of the CR, Development of ex vivo cellular models for pancreatic adenocarcinoma: markers and targets for precision medicine, Subprogram 1 - standard