ŠIMONÍK, Jan, Pavla BOUCHALOVÁ, Petr LAPČÍK, David POTĚŠIL, Ján PODHOREC, Lucia JANÁČOVÁ, Alice HLOBILKOVÁ, Vlad POPOVICI, Alexandr POPRACH, Milan HORA, Ondřej FIALA and Pavel BOUCHAL. Transmembrane glycoprotein GPNMB is a potential marker of poor response of metastatic renal cell carcinoma to tyrosine kinase receptor inhibitor treatment. In 9th Informal Proteomic Meeting November 30 – December 1, Mělník, Masaryk Cultural House. 2023.
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Basic information
Original name Transmembrane glycoprotein GPNMB is a potential marker of poor response of metastatic renal cell carcinoma to tyrosine kinase receptor inhibitor treatment
Authors ŠIMONÍK, Jan (203 Czech Republic, belonging to the institution), Pavla BOUCHALOVÁ (203 Czech Republic, belonging to the institution), Petr LAPČÍK (203 Czech Republic, belonging to the institution), David POTĚŠIL (203 Czech Republic, belonging to the institution), Ján PODHOREC (703 Slovakia, belonging to the institution), Lucia JANÁČOVÁ (703 Slovakia, belonging to the institution), Alice HLOBILKOVÁ (203 Czech Republic, belonging to the institution), Vlad POPOVICI (642 Romania, belonging to the institution), Alexandr POPRACH (203 Czech Republic, belonging to the institution), Milan HORA (203 Czech Republic, belonging to the institution), Ondřej FIALA (203 Czech Republic) and Pavel BOUCHAL (203 Czech Republic, belonging to the institution).
Edition 9th Informal Proteomic Meeting November 30 – December 1, Mělník, Masaryk Cultural House, 2023.
Other information
Original language English
Type of outcome Conference abstract
Field of Study 10608 Biochemistry and molecular biology
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
RIV identification code RIV/00216224:14310/23:00132430
Organization unit Faculty of Science
Keywords in English Transmembrane glycoprotein GPNMB; metastatic renal cell carcinoma; tyrosine kinase receptor inhibitor treatment
Changed by Changed by: Mgr. Tereza Miškechová, učo 341652. Changed: 5/4/2024 09:58.
Abstract
Metastatic renal cell carcinoma (mRCC) represents a systemic disease with a very poor prognosis. A targeted therapy with receptor tyrosine kinase inhibitors (rTKI) has been used in the first-line treatment of mRCC patients with good or intermediate prognosis for many years. However, about half of the patients respond poorly or do not respond to this treatment, and there is no clinical marker identifying these non-responders. To understand the molecular mechanisms associated with a poor response to rTKI and to identify patients who would benefit from an alternate treatment (e.g. immunotherapy or clinical trial), we performed a retrospective proteomics study on 53 mRCC tumors treated with rTKI (23 responders/30 non-responders) using next-generation, data-independent acquisition (DIA) mass spectrometry with a consistent quantification of 5977 protein groups (FDR 0.01). Analysis of differential protein abundance identified a panel of 12 proteins associated with treatment response, of which 5 were successfully validated in an independent cohort of 22 mRCC tumors (10 responders /12 non-responders). Of these, transmembrane glycoprotein GPNMB exhibited the best predictive value (AUC.5=0.756, p=4.733.10 -10 ), was associated with the time to response (p=0.048), and the trend of increased GPNMB protein levels was visible in another independent cohort (n=40) using immunohistochemistry. To investigate the potential of GPNMB to serve as an alternative therapeutic target in mRCC, we knocked out its expression using CRISPR/Cas9 in 786-0 cell line derived from RCC. Comparison of parental and GPNMB -/- cells showed that higher GPNMB protein level supports migration capacity of RCC cells in the scratch assay (p=0.0073) and Transwell assay (p < 0.0001), and supports cell invasiveness in Transwell assay (p=0.0009) and 3D invasion assay (p < 0.0001). In summary, GPNMB has the potential to serve as a biomarker of a poor mRCC response to rTKI treatment and potentially also as a therapeutic target in mRCC non-responding to rTKI as an alternative to TKI and potentially immunotherapy treatment.
Links
LM2018129, research and development projectName: Národní infrastruktura pro biologické a medicínské zobrazování Czech-BioImaging
Investor: Ministry of Education, Youth and Sports of the CR
LM2023042, research and development projectName: Česká infrastruktura pro integrativní strukturní biologii
Investor: Ministry of Education, Youth and Sports of the CR, CIISB - Czech Infrastructure for Integrative Structural Biology
LX22NPO5102, research and development projectName: Národní ústav pro výzkum rakoviny (Acronym: NÚVR)
Investor: Ministry of Education, Youth and Sports of the CR, National institute for cancer research, 5.1 EXCELES
MUNI/A/1313/2022, interní kód MUName: Podpora biochemického výzkumu v roce 2023
Investor: Masaryk University
NV19-08-00250, research and development projectName: Proteotypová klasifikace renálního karcinomu ve vztahu k prognóze a terapeutické odpovědi
Investor: Ministry of Health of the CR
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