D
2023
Exploring the Icy Treasures: Biosynthetic potential of Antarctic bacteria from James Ross Island
BEZDÍČEK KRÁLOVÁ, Stanislava, Mathias FLIEDER, Songcan CHEN, Peter ŠPAČEK, Natalia STANIC et. al.
Basic information
Original name
Exploring the Icy Treasures: Biosynthetic potential of Antarctic bacteria from James Ross Island
Authors
BEZDÍČEK KRÁLOVÁ, Stanislava, Mathias FLIEDER, Songcan CHEN, Peter ŠPAČEK, Natalia STANIC, Matěj BEZDÍČEK, Martin ZEHL, Sergey ZOTCHEV, Thomas RATTEI and Alexander LOY
Edition
Brno, Proceedings: Students in Polar and Alpine Research Conference 2023, p. 4-4, 1 pp. 2023
Publisher
Masaryk University
Other information
Type of outcome
Stať ve sborníku
Field of Study
10606 Microbiology
Country of publisher
Czech Republic
Confidentiality degree
není předmětem státního či obchodního tajemství
Publication form
electronic version available online
Organization unit
Faculty of Science
Keywords (in Czech)
Antarktida; biosynteticky potencial; nové antimikrobiální látky; Streptomyces; Actinokineospora; genetické manipulace
Keywords in English
Antarctica; biosynthetic potential; novel antimicrobials; Streptomyces; Actinokineospora; genetic manipulations
Tags
International impact, Reviewed
V originále
Background: The growing problem of antimicrobial resistance motivated scientists to re-explore natural sources of bioactive secondary metabolites. Antarctica represents an extreme environment colonized by bacteria with unique adaptation mechanisms allowing them to thrive under harsh conditions. Such adaptations include production of secondary metabolites to inhibit competitors or sustain abiotic stresses, which predestines these microbes as source of natural products for biomedical use. Objectives: The aim of this work was to recover novel bacterial taxa from Antarctic soils to access the biosynthetic potential hidden in yet uncultivated bacteria. The main objective is the activation of silent biosynthetic gene clusters enabling discovery of novel secondary metabolites, mainly through co-cultivation strategies. Methods: Three isolation methods (pre-selection of spore-forming bacteria, low-nutrient and soil-extract based media) were applied to recover novel bacteria from Antarctic soils, predominantly targeting phyla with high biosynthetic potential such as Actinobacteriota, Proteobacteria and Firmicutes. Activation of silent biosynthetic gene clusters was attempted through targeted cultivation and co-cultivation. Screening for bioactive molecules and evaluation of their novelty was achieved by application of genomics, metabolomics, and bioactivity testing. Results: A collection of 917 isolates was established. Recovered isolates were associated with four bacterial phyla including 77 isolates of novel species. Proteobacteria and Actinobacteriota represented the most abundant phyla. Specific media stimulated biosynthesis of several unknown natural products. Eight strains produced antimicrobial compounds against resistant and multidrug-resistant bacterial and fungal pathogens. Importantly, metabolomic profiling indicated that these strains produced several new secondary metabolites, which may be responsible for the observed antimicrobial activities.
Links
LM2015078, research and development project | Name: Česká polární výzkumná infrastruktura (Acronym: CzechPolar2) | Investor: Ministry of Education, Youth and Sports of the CR |
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