D 2023

Exploring the Icy Treasures: Biosynthetic potential of Antarctic bacteria from James Ross Island

BEZDÍČEK KRÁLOVÁ, Stanislava, Mathias FLIEDER, Songcan CHEN, Peter ŠPAČEK, Natalia STANIC et. al.

Basic information

Original name

Exploring the Icy Treasures: Biosynthetic potential of Antarctic bacteria from James Ross Island

Authors

BEZDÍČEK KRÁLOVÁ, Stanislava, Mathias FLIEDER, Songcan CHEN, Peter ŠPAČEK, Natalia STANIC, Matěj BEZDÍČEK, Martin ZEHL, Sergey ZOTCHEV, Thomas RATTEI and Alexander LOY

Edition

Brno, Proceedings: Students in Polar and Alpine Research Conference 2023, p. 4-4, 1 pp. 2023

Publisher

Masaryk University

Other information

Language

English

Type of outcome

Stať ve sborníku

Field of Study

10606 Microbiology

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

Publication form

electronic version available online

References:

URL

Organization unit

Faculty of Science

ISBN

978-80-280-0456-9

Keywords (in Czech)

Antarktida; biosynteticky potencial; nové antimikrobiální látky; Streptomyces; Actinokineospora; genetické manipulace

Keywords in English

Antarctica; biosynthetic potential; novel antimicrobials; Streptomyces; Actinokineospora; genetic manipulations

Tags

International impact, Reviewed
Změněno: 24/4/2024 14:13, Mgr. Marie Šípková, DiS.

Abstract

V originále

Background: The growing problem of antimicrobial resistance motivated scientists to re-explore natural sources of bioactive secondary metabolites. Antarctica represents an extreme environment colonized by bacteria with unique adaptation mechanisms allowing them to thrive under harsh conditions. Such adaptations include production of secondary metabolites to inhibit competitors or sustain abiotic stresses, which predestines these microbes as source of natural products for biomedical use. Objectives: The aim of this work was to recover novel bacterial taxa from Antarctic soils to access the biosynthetic potential hidden in yet uncultivated bacteria. The main objective is the activation of silent biosynthetic gene clusters enabling discovery of novel secondary metabolites, mainly through co-cultivation strategies. Methods: Three isolation methods (pre-selection of spore-forming bacteria, low-nutrient and soil-extract based media) were applied to recover novel bacteria from Antarctic soils, predominantly targeting phyla with high biosynthetic potential such as Actinobacteriota, Proteobacteria and Firmicutes. Activation of silent biosynthetic gene clusters was attempted through targeted cultivation and co-cultivation. Screening for bioactive molecules and evaluation of their novelty was achieved by application of genomics, metabolomics, and bioactivity testing. Results: A collection of 917 isolates was established. Recovered isolates were associated with four bacterial phyla including 77 isolates of novel species. Proteobacteria and Actinobacteriota represented the most abundant phyla. Specific media stimulated biosynthesis of several unknown natural products. Eight strains produced antimicrobial compounds against resistant and multidrug-resistant bacterial and fungal pathogens. Importantly, metabolomic profiling indicated that these strains produced several new secondary metabolites, which may be responsible for the observed antimicrobial activities.

Links

LM2015078, research and development project
Name: Česká polární výzkumná infrastruktura (Acronym: CzechPolar2)
Investor: Ministry of Education, Youth and Sports of the CR
Displayed: 4/11/2024 06:06