PORUBSKÁ, Jana, Veronika HORSKÁ, Vladimír HORSKÝ and Radka SVOBODOVÁ. Exploring the relationship between structural quality and journal impact factor. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.
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Basic information
Original name Exploring the relationship between structural quality and journal impact factor
Authors PORUBSKÁ, Jana, Veronika HORSKÁ, Vladimír HORSKÝ and Radka SVOBODOVÁ.
Edition 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics, 2023.
Other information
Original language English
Type of outcome Conference abstract
Field of Study 10608 Biochemistry and molecular biology
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
WWW Conference website
Organization unit Central European Institute of Technology
Keywords in English PDB; PDBe; Protein Data Bank; three-dimensional macromolecular structure; validation; database; trends in quality; Journal Impact Factor; Structure Quality Metrics
Changed by Changed by: Mgr. Bc. Jana Porubská, učo 436837. Changed: 23/12/2023 16:37.
Abstract
In structural bioinformatics, scientific research heavily depends on the structural data stored in the Protein Data Bank (PDB). The scientific community's widespread utilization of structural models puts pressure on the integrity of these structures. Consequently, a profound emphasis exists on structural validation, with the PDB providing detailed validation reports with various quality attributes. Our project embarks on an exploration of structural quality across different scientific journals. We investigate the interplay between structural quality metrics and the journal impact factor. Our methodology involves a selection of journals, categorizing them based on their impact factor, and the compilation of a dataset containing selected quality factors of these structures. Finally, our analysis uses statistical methods to describe the dynamic nature of the structural quality within each journal category.
Links
LM2023055, research and development projectName: Česká národní infrastruktura pro biologická data
Investor: Ministry of Education, Youth and Sports of the CR, ELIXIR-CZ: Czech National Infrastructure for Biological Data
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