EMDB-the Electron Microscopy Data Bank

J 2023

EMDB-the Electron Microscopy Data Bank

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY et. al.

Basic information

Original name

EMDB-the Electron Microscopy Data Bank

Authors

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS (guarantor), Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ (703 Slovakia, belonging to the institution), Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG and Xiaodan MA

Edition

Nucleic acids research, Oxford, Oxford University Press, 2023, 0305-1048

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10608 Biochemistry and molecular biology

Country of publisher

United Kingdom of Great Britain and Northern Ireland

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

Impact factor

Impact factor: 14.900 in 2022

RIV identification code

RIV/00216224:14740/23:00133641

Organization unit

Central European Institute of Technology

DOI

http://dx.doi.org/10.1093/nar/gkad1019

UT WoS

001107377700001

Keywords in English

Electron Microscopy Data Bank; three-dimensional electron microscopy; PDB; EMDB

Abstract

V originále

The Electron Microscopy Data Bank (EMDB) is the global public archive of three-dimensional electron microscopy (3DEM) maps of biological specimens derived from transmission electron microscopy experiments. As of 2021, EMDB is managed by the Worldwide Protein Data Bank consortium (wwPDB; wwpdb.org) as a wwPDB Core Archive, and the EMDB team is a core member of the consortium. Today, EMDB houses over 30 000 entries with maps containing macromolecules, complexes, viruses, organelles and cells. Herein, we provide an overview of the rapidly growing EMDB archive, including its current holdings, recent updates, and future plans.

Citovat

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG and Xiaodan MA. EMDB-the Electron Microscopy Data Bank. Nucleic acids research. Oxford: Oxford University Press, 2023, vol. 52, Jan, p. 456-465. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1019.

@article{2377738,
   author = {Turner, Jack and Abbott, Sanja and Fonseca, Neli and Carrijo, Lucas and Duraisamy, Amudha Kumari and Salih, Osman and Wang, Zhe and Kleywegt, Gerard J and Morris, Kyle L and Patwardhan, Ardan and Burley, Stephen K and Crichlow, Gregg and Feng, Zukang and Flatt, Justin W and Ghosh, Sutapa and Hudson, Brian P and Lawson, Catherine L and Liang, Yuhe and Peisach, Ezra and Persikova, Irina and Sekharan, Monica and Shao, Chenghua and Young, Jasmine and Velankar, Sameer and Armstrong, David and Bage, Marcus and Bueno, Wesley Morellato and Evans, Genevieve and Gáborová, Romana and Ganguly, Sudakshina and Gupta, Deepti and Harrus, Deborah and Tanweer, Ahsan and Bansal, Manju and Rangannan, Vetriselvi and Kurisu, Genji and Cho, Hasumi and Ikegawa, Yasuyo and Kengaku, Yumiko and Kim, Ju Yaen and Niwa, Satomi and Sato, Junko and Takuwa, Ayako and Yu, Jian and Hoch, Jeffrey C and Baskaran, Kumaran and Xu, Wenqing and Zhang, Weizhe and Ma, Xiaodan},
   article_location = {Oxford},
   article_number = {Jan},
   doi = {http://dx.doi.org/10.1093/nar/gkad1019},
   keywords = {Electron Microscopy Data Bank; three-dimensional electron microscopy; PDB; EMDB},
   language = {eng},
   issn = {0305-1048},
   journal = {Nucleic acids research},
   title = {EMDB-the Electron Microscopy Data Bank},
   url = {https://academic.oup.com/nar/article/52/D1/D456/7442543?login=false},
   volume = {52},
   year = {2023}
}

TY  - JOUR
ID  - 2377738
AU  - Turner, Jack - Abbott, Sanja - Fonseca, Neli - Carrijo, Lucas - Duraisamy, Amudha Kumari - Salih, Osman - Wang, Zhe - Kleywegt, Gerard J - Morris, Kyle L - Patwardhan, Ardan - Burley, Stephen K - Crichlow, Gregg - Feng, Zukang - Flatt, Justin W - Ghosh, Sutapa - Hudson, Brian P - Lawson, Catherine L - Liang, Yuhe - Peisach, Ezra - Persikova, Irina - Sekharan, Monica - Shao, Chenghua - Young, Jasmine - Velankar, Sameer - Armstrong, David - Bage, Marcus - Bueno, Wesley Morellato - Evans, Genevieve - Gáborová, Romana - Ganguly, Sudakshina - Gupta, Deepti - Harrus, Deborah - Tanweer, Ahsan - Bansal, Manju - Rangannan, Vetriselvi - Kurisu, Genji - Cho, Hasumi - Ikegawa, Yasuyo - Kengaku, Yumiko - Kim, Ju Yaen - Niwa, Satomi - Sato, Junko - Takuwa, Ayako - Yu, Jian - Hoch, Jeffrey C - Baskaran, Kumaran - Xu, Wenqing - Zhang, Weizhe - Ma, Xiaodan
PY  - 2023
TI  - EMDB-the Electron Microscopy Data Bank
JF  - Nucleic acids research
VL  - 52
IS  - Jan
SP  - 456-465
EP  - 456-465
PB  - Oxford University Press
SN  - 03051048
KW  - Electron Microscopy Data Bank
KW  - three-dimensional electron microscopy
KW  - PDB
KW  - EMDB
UR  - https://academic.oup.com/nar/article/52/D1/D456/7442543?login=false
N2  - The Electron Microscopy Data Bank (EMDB) is the global public archive of three-dimensional electron microscopy (3DEM) maps of biological specimens derived from transmission electron microscopy experiments. As of 2021, EMDB is managed by the Worldwide Protein Data Bank consortium (wwPDB; wwpdb.org) as a wwPDB Core Archive, and the EMDB team is a core member of the consortium. Today, EMDB houses over 30 000 entries with maps containing macromolecules, complexes, viruses, organelles and cells. Herein, we provide an overview of the rapidly growing EMDB archive, including its current holdings, recent updates, and future plans.
ER  -

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG and Xiaodan MA. EMDB-the Electron Microscopy Data Bank. \textit{Nucleic acids research}. Oxford: Oxford University Press, 2023, vol.~52, Jan, p.~456-465. ISSN~0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1019.

Detailed Information on Publication Record