Detailed Information on Publication Record
2024
Cell Tracking based on Integer Linear Programming and Probability Scores
LUX, Filip and Petr MATULABasic information
Original name
Cell Tracking based on Integer Linear Programming and Probability Scores
Authors
LUX, Filip and Petr MATULA
Edition
Athens, Athens, Greece, IEEE 21th International Symposium on Biomedical Imaging, p. 1-5, 5 pp. 2024
Publisher
IEEE 21th International Symposium on Biomedical Imaging
Other information
Language
English
Type of outcome
Stať ve sborníku
Field of Study
10201 Computer sciences, information science, bioinformatics
Country of publisher
United States of America
Confidentiality degree
není předmětem státního či obchodního tajemství
Organization unit
Faculty of Informatics
ISBN
979-8-3503-1334-5
ISSN
UT WoS
bez WOS
Tags
Tags
International impact, Reviewed
Změněno: 5/9/2024 09:40, RNDr. Filip Lux
Abstract
V originále
The cell tracking problem can be formulated as a global optimization problem based on integer linear (IL) programming. The obtained solution depends on the definition of the IL program and the chosen costs of the events considered in the problem formulation. In general, balancing meaningful costs across different events is difficult. To simplify this problem, we propose a cost assignment approach based on probability scores, allowing us to easily interpret the free parameters. The idea is presented based on the BF-C2DL-HSC dataset from the Cell Tracking Challenge. We show our method reaches state-of-the-art performance when evaluating both technical and biological tracking measures.
Links
| GA21-20374S, research and development project |
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| LM2023050, research and development project |
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| MUNI/A/1592/2023, interní kód MU |
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