Solution structure of the dodecamer d-(CATGGGCC-CATG)(2) is B-DNA. Experimental and molecular dynamics study

DORNBERGER, Utz, Naděžda ŠPAČKOVÁ, Axel WALTER, Friedrich A. GOLLMICK, Jiří ŠPONER and hartmut FRITZSCHE. Solution structure of the dodecamer d-(CATGGGCC-CATG)(2) is B-DNA. Experimental and molecular dynamics study. Journal of Biomolecular Structure and Dynamics. GUILDERLAND: Adenine Press, 2001, vol. 19, No 1, p. 159-174. ISSN 0739-1102.

Basic information

Original name

Solution structure of the dodecamer d-(CATGGGCC-CATG)(2) is B-DNA. Experimental and molecular dynamics study

Authors

DORNBERGER, Utz, Naděžda ŠPAČKOVÁ, Axel WALTER, Friedrich A. GOLLMICK, Jiří ŠPONER and hartmut FRITZSCHE

Edition

Journal of Biomolecular Structure and Dynamics, GUILDERLAND, Adenine Press, 2001, 0739-1102

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Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10610 Biophysics

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 1.243

RIV identification code

RIV/00216224:14310/01:00005557

Organization unit

Faculty of Science

Keywords in English

PARTICLE MESH EWALD; NUCLEIC-ACIDS; AB-INITIO; CONFORMATIONAL-ANALYSIS; COUPLING-CONSTANTS; AQUEOUS-SOLUTION; FORCE-FIELD; NMR; BASE; DUPLEX

Tags

AB-INITIO, AQUEOUS-SOLUTION, BASE, CONFORMATIONAL-ANALYSIS, COUPLING-CONSTANTS, duplex, FORCE-FIELD, NMR, NUCLEIC-ACIDS, PARTICLE MESH EWALD

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Abstract

V originále

The DNA duplex d-(CATGGGCCCATG)(2) has been studied in solution by FTIR. NMR and CD. The experimental approaches have been complemented by series of large-scale unrestrained molecular dynamics simulation with explicit inclusion of solvent and counterions .

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Links

LN00A016, research and development project

Name: BIOMOLEKULÁRNÍ CENTRUM Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular Center