LEXA, Matej and Giorgio VALLE. PRIMEX: rapid identification of oligonucleotide matches in whole genomes. Bioinformatics, Oxford: Oxford University Press, 2003, vol. 19, No 18, p. 2486-2488. ISSN 1367-4803.
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Basic information
Original name PRIMEX: rapid identification of oligonucleotide matches in whole genomes
Authors LEXA, Matej and Giorgio VALLE.
Edition Bioinformatics, Oxford, Oxford University Press, 2003, 1367-4803.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 20206 Computer hardware and architecture
Confidentiality degree is not subject to a state or trade secret
WWW Primex server
Impact factor Impact factor: 6.701
Organization unit Faculty of Informatics
UT WoS 000187217700025
Keywords in English genomic; sequence; DNA; rapid search; inexact matches; mismatches; PCR primers
Tags DNA, genomic, inexact matches, mismatches, PCR primers, rapid search, SEQUENCE
Tags International impact, Reviewed
Changed by Changed by: Ing. Matej Lexa, Ph.D., učo 31298. Changed: 21/11/2006 21:16.
Abstract
PRIMEX can detect oligonucleotide sequences in whole genomes, allowing for mismatches. Using a word lookup table and server functionality, PRIMEX accepts queries from client software and returns matches rapidly. We find it faster and more sensitive than currently available tools.
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