J 2005

Stratified resampling of phytosociological databases: some strategies for obtaining more representative data sets for classification studies

KNOLLOVÁ, Ilona, Milan CHYTRÝ, Lubomír TICHÝ and Ondřej HÁJEK

Basic information

Original name

Stratified resampling of phytosociological databases: some strategies for obtaining more representative data sets for classification studies

Name in Czech

Stratifikovaný výběr dat z fytocenologických databází: některé strategie pro získání reprezentativnějších datových soubor pro klasifikační studie

Authors

KNOLLOVÁ, Ilona (203 Czech Republic, guarantor), Milan CHYTRÝ (203 Czech Republic), Lubomír TICHÝ (203 Czech Republic) and Ondřej HÁJEK (203 Czech Republic)

Edition

Journal of Vegetation Science, Uppsala, Opulus Press, 2005, 110-9233

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

RIV identification code

RIV/00216224:14310/05:00012593

Organization unit

Faculty of Science

UT WoS

000232457000014

Keywords in English

Ellenberg indicator values; Geographical stratification; GIS; Habitat stratification; Phytosociological data; Plant community; Relevé; Sampling design; Survey
Změněno: 16/12/2006 18:44, prof. RNDr. Milan Chytrý, Ph.D.

Abstract

V originále

Question: The heterogeneous origin of the data in large phytosociological databases may seriously influence the results of their analysis. Therefore we propose some strategies for stratified resampling of such databases, which may improve the representativeness of the data. We also explore the effects of different resampling options on vegetation classification. Methods: We used 6050 plot samples (relevés) of mesic grasslands from the Czech Republic. We stratified this database using (1) geographical stratification in a grid; (2) habitat stratification created by an overlay of digital maps in GIS; (3) habitat stratification with strata defined by traditional phytosociological associations; (4) habitat stratification by numerical classification and (5) habitat stratification by Ellenberg indicator values. Each time we resampled the database, taking equal numbers of relevés per stratum. We then carried out cluster analyses for the resampled data sets and compared the resulting classifications using a newly developed procedure. Results: Random resampling of the initial data set and geographically stratified resampling resulted in similar classifications. By contrast, classifications of the resampled data sets that were based on habitat stratifications (25) differed from each other and from the initial data set. Stratification 2 resulted in classifications that strongly reflected environmental factors with a coarse grain of spatial heterogeneity (e.g. macroclimate), whereas stratification 5 resulted in classifications emphasizing fine-grained factors (e.g. soil nutrient status). Stratification 3 led to the most deviating results, possibly due to the subjective nature of the traditional phytosociological classifications. Conclusions: Stratified resampling may increase the representativeness of phytosociological data sets, but different types of stratification may result in different classifications. No single resampling strategy is optimal or superior: the appropriate stratification method must be selected according to the objectives of specific studies.

In Czech

Testování stratifikovaného výběru dat z fytocenologických databází a některých strategií pro získání reprezentativnějších datových souborů pro klasifikační studie

Links

GA206/02/0957, research and development project
Name: Formalizovaná klasifikace polopřirozené travinné vegetace České republiky
Investor: Czech Science Foundation, Formalized classification of the semi-natural grassland vegetation of the Czech Republic
GA206/05/0020, research and development project
Name: Vegetace České republiky: formalizovaná typizace, monografie a expertní systém
Investor: Czech Science Foundation, Vegetation of the Czech Republic: formalized typology, monograph and expert system
MSM0021622416, plan (intention)
Name: Diverzita biotických společenstev a populací: kauzální analýza variability v prostoru a čase
Investor: Ministry of Education, Youth and Sports of the CR, Diversity of Biotic Communities and Populations: Causal Analysis of variation in space and time