POKORNÁ, Martina, Gianluca CIOCI, Stephanie PERRET, Etienne REBUFFET, Nikola KOSTLÁNOVÁ, Jan ADAM, Nechama GILBOA-GARBER, Edward P. MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Unusual Entropy-Driven Affinity of Chromobacterium violaceum Lectin CV-IIL Towards Fucose and Mannose. Biochemistry. 2006, vol. 45, No 24, p. 7501-7510. ISSN 0006-2960.
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Basic information
Original name Unusual Entropy-Driven Affinity of Chromobacterium violaceum Lectin CV-IIL Towards Fucose and Mannose
Name in Czech Studium neobvykle entropicky řízené interakce lektinu CV-IIL z bakterie Chromobacterium vioalceum s fukosou a manosou
Authors POKORNÁ, Martina (203 Czech Republic), Gianluca CIOCI (250 France), Stephanie PERRET (250 France), Etienne REBUFFET (250 France), Nikola KOSTLÁNOVÁ (203 Czech Republic), Jan ADAM (203 Czech Republic), Nechama GILBOA-GARBER (376 Israel), Edward P. MITCHELL (250 France), Anne IMBERTY (250 France) and Michaela WIMMEROVÁ (203 Czech Republic, guarantor).
Edition Biochemistry, 2006, 0006-2960.
Other information
Original language English
Type of outcome Article in a journal
Field of Study 10600 1.6 Biological sciences
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 3.633
RIV identification code RIV/00216224:14310/06:00016201
Organization unit Faculty of Science
UT WoS 000238217100010
Keywords in English Chromobacterium violaceum;monosaccharide;lectin;affinity
Tags affinity, Chromobacterium violaceum, lectin, monosaccharide
Changed by Changed by: Mgr. Martina Pokorná, Ph.D., MBA, učo 13847. Changed: 28/12/2006 20:41.
Abstract
The purple pigmented bacterium Chromobacterium violaceum is a dominant component of tropical soil micorbiota that cause rare but fatal septicaemia in humnas. Its sequenced genome provides insight into the abundant potential of this organism for biotechnological and pharmaceutical app;ications and allowed an ORF encoding a protein that is 60% identical to tha fucese bindient lectin (PA-IIL) from Pseudomonas aeruginosa and the mannose binding lectin (RS-IIL) from Ralstonia solanacearum to be identified. The lectin, CV-IIL, has recently been purified from C. violaceum [1] and has been confirmed to be a tetramer with subunit size of 11.86 kDa and a binding preference for fucose. We describe here tha cloning of CV-IIL and its expression as a recombinant protein. A complete structure-function characterization has been made in an effort to analyze tha specificity and affinity of CV-IIL for fucose and mannose. Crystal structures of CV-IIL complexes with monosaccharides have yielded the molecular basis of the specificity. Each monomer contains two close calcium cations that mediate the binding of the monosaccharides, which occures in different orientations for fucose and mannose. The thermodynamics of binding has been analyzed by titration microcalorimetry, giving dissociation constants of 1.7 and 19 uM for a-methyl fucoside and a-methyl mannoside, respectively. Further analysis demonstrated a strongly favorable entropy term that is unusual in carbohydrate binding. A comparison with both PA-IIL and RS-IIL, which have binding preferences for fucose and mannose, respectively, yieldes insights into the monosaccharide specificity of this important class of soluble bacterial lectins.
Abstract (in Czech)
The purple pigmented bacterium Chromobacterium violaceum is a dominant component of tropical soil micorbiota that cause rare but fatal septicaemia in humnas. Its sequenced genome provides insight into the abundant potential of this organism for biotechnological and pharmaceutical app;ications and allowed an ORF encoding a protein that is 60% identical to tha fucese bindient lectin (PA-IIL) from Pseudomonas aeruginosa and the mannose binding lectin (RS-IIL) from Ralstonia solanacearum to be identified. The lectin, CV-IIL, has recently been purified from C. violaceum [1] and has been confirmed to be a tetramer with subunit size of 11.86 kDa and a binding preference for fucose. We describe here tha cloning of CV-IIL and its expression as a recombinant protein. A complete structure-function characterization has been made in an effort to analyze tha specificity and affinity of CV-IIL for fucose and mannose. Crystal structures of CV-IIL complexes with monosaccharides have yielded the molecular basis of the specificity. Each monomer contains two close calcium cations that mediate the binding of the monosaccharides, which occures in different orientations for fucose and mannose. The thermodynamics of binding has been analyzed by titration microcalorimetry, giving dissociation constants of 1.7 and 19 uM for a-methyl fucoside and a-methyl mannoside, respectively. Further analysis demonstrated a strongly favorable entropy term that is unusual in carbohydrate binding. A comparison with both PA-IIL and RS-IIL, which have binding preferences for fucose and mannose, respectively, yieldes insights into the monosaccharide specificity of this important class of soluble bacterial lectins.
Links
GD204/03/H016, research and development projectName: Strukturní biofyzika makromolekul
Investor: Czech Science Foundation, Structural biophysics of macromolecules
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