DAMBORSKÝ, Jiří, Martin PETŘEK, Pavel BANÁŠ and Michal OTYEPKA. Identification of Tunnels in Proteins, Nucleic Acids, Inorganic Materials and Molecular Ensembles. BIOTECHNOLOGY JOURNAL. 2007, vol. 2, No 1, p. 62-67. ISSN 1860-6768. |
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@article{721206, author = {Damborský, Jiří and Petřek, Martin and Banáš, Pavel and Otyepka, Michal}, article_number = {1}, keywords = {structure-function relationships; CAVER; calculations of tunnels;}, language = {eng}, issn = {1860-6768}, journal = {BIOTECHNOLOGY JOURNAL}, title = {Identification of Tunnels in Proteins, Nucleic Acids, Inorganic Materials and Molecular Ensembles}, url = {http://loschmidt.chemi.muni.cz/peg/abstracts/btj07a.html}, volume = {2}, year = {2007} }
TY - JOUR ID - 721206 AU - Damborský, Jiří - Petřek, Martin - Banáš, Pavel - Otyepka, Michal PY - 2007 TI - Identification of Tunnels in Proteins, Nucleic Acids, Inorganic Materials and Molecular Ensembles JF - BIOTECHNOLOGY JOURNAL VL - 2 IS - 1 SP - 62-67 EP - 62-67 SN - 18606768 KW - structure-function relationships KW - CAVER KW - calculations of tunnels; UR - http://loschmidt.chemi.muni.cz/peg/abstracts/btj07a.html N2 - he knowledge of the access paths connecting interior of molecular systems with surrounding environment is important for understanding of structure-function relationships and engineering of molecules for biotechnological applications. CAVER is a computer program developed for calculations of tunnels, channels or pores in the biomolecules, inorganic materials and molecular ensembles. The algorithm performs a skeleton search based on a reciprocal distance function grid. The algorithm is implemented in the stand-alone version, web version and as plug-in for PyMol. CAVER is available from the web site http://loschmidt.chemi.muni.cz/caver. ER -
DAMBORSKÝ, Jiří, Martin PETŘEK, Pavel BANÁŠ and Michal OTYEPKA. Identification of Tunnels in Proteins, Nucleic Acids, Inorganic Materials and Molecular Ensembles. \textit{BIOTECHNOLOGY JOURNAL}. 2007, vol.~2, No~1, p.~62-67. ISSN~1860-6768.
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