D 2007

TRITON: Graphic software for docking ligands to protein mutants

PROKOP, Martin, Jan ADAM, Zdeněk KŘÍŽ, Michaela WIMMEROVÁ, Jaroslav KOČA et. al.

Basic information

Original name

TRITON: Graphic software for docking ligands to protein mutants

Name in Czech

TRITON: Graphic software for docking ligands to protein mutants

Authors

PROKOP, Martin, Jan ADAM, Zdeněk KŘÍŽ, Michaela WIMMEROVÁ and Jaroslav KOČA

Edition

Prague, Modeling Interactions in Biomolecules III, book of abstracts, p. 44-44, 2007

Publisher

Neuveden

Other information

Language

English

Type of outcome

Stať ve sborníku

Field of Study

10600 1.6 Biological sciences

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

Organization unit

Faculty of Science

Keywords in English

TRITON; molecular modelling; graphical software; protein-ligand docking

Tags

International impact
Změněno: 7/11/2007 16:00, Mgr. Martin Prokop, Ph.D.

Abstract

V originále

We developed graphic program TRITON which automates processes related to computational engineering of proteins. Newest version of TRITON (4.0) was extended to enable study of ligand-protein binding using docking methodology. External program AutoDock is used for searching binding modes and calculation of binding energy. Methodology was tested with monosaccharide ligands which were docked into structure of PA-IIL lectin and some of its mutants. Program TRITON is available free for academic users.

In Czech

We developed graphic program TRITON which automates processes related to computational engineering of proteins. Newest version of TRITON (4.0) was extended to enable study of ligand-protein binding using docking methodology. External program AutoDock is used for searching binding modes and calculation of binding energy. Methodology was tested with monosaccharide ligands which were docked into structure of PA-IIL lectin and some of its mutants. Program TRITON is available free for academic users.

Links

MSM0021622413, plan (intention)
Name: Proteiny v metabolismu a při interakci organismů s prostředím
Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment