J 2007

Refinement of the AMBER force field for nucleic acids: Improving the description of alfa/gamma conformers

PEREZ, Alberto, Ivan MARCHAN, Daniel SVOZIL, Jiří ŠPONER, Thomas CHEATHAM et. al.

Basic information

Original name

Refinement of the AMBER force field for nucleic acids: Improving the description of alfa/gamma conformers

Name in Czech

Propracování silového pole AMBER pro nukleové kyseliny: Zlepšený popis alfa/gamma konformeru

Authors

PEREZ, Alberto (724 Spain), Ivan MARCHAN (724 Spain), Daniel SVOZIL (203 Czech Republic), Jiří ŠPONER (203 Czech Republic, guarantor), Thomas CHEATHAM (840 United States of America) and Charles LAUGHTON (826 United Kingdom of Great Britain and Northern Ireland)

Edition

Biophysical Journal, 2007, 0006-3495

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10610 Biophysics

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 4.627

RIV identification code

RIV/00216224:14310/07:00022917

Organization unit

Faculty of Science

UT WoS

000246401800007

Keywords in English

molecular dynamics methods; nucleic acids
Změněno: 18/1/2008 11:43, prof. RNDr. Jiří Šponer, DrSc.

Abstract

V originále

We present here the parmbsc0 force field, a refinement of the AMBER parm99 force field, where emphasis has been made on the correct representation of the alpha/gamma concerted rotation in nucleic acids.

In Czech

Propracování silového pole AMBER pro nukleové kyseliny: Zlepšený popis alfa/gamma konformerů

Links

LC06030, research and development project
Name: Biomolekulární centrum
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular centre