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@inproceedings{727932,
author = {Kozlíková, Barbora and Andres, Filip and Sochor, Jiří},
address = {Grahamstown, South Africa},
booktitle = {Computer graphics, virtual reality, visualisation and interaction in Africa AFRIGRAPH '07},
edition = {October 2007},
keywords = {protein; tunnel; visualization; tetrahedrization; Loop subdivision},
language = {eng},
location = {Grahamstown, South Africa},
isbn = {978-1-59593-906-7},
pages = {111-118},
publisher = {ACM},
title = {Visualization of Tunnels in Protein Molecules},
url = {http://portal.acm.org/citation.cfm?id=1294704&coll=Portal&dl=ACM&CFID=6986965&CFTOKEN=49167465},
year = {2007}
}
TY - JOUR
ID - 727932
AU - Kozlíková, Barbora - Andres, Filip - Sochor, Jiří
PY - 2007
TI - Visualization of Tunnels in Protein Molecules
PB - ACM
CY - Grahamstown, South Africa
SN - 9781595939067
KW - protein
KW - tunnel
KW - visualization
KW - tetrahedrization
KW - Loop subdivision
UR - http://portal.acm.org/citation.cfm?id=1294704&coll=Portal&dl=ACM&CFID=6986965&CFTOKEN=49167465
N2 - This paper presents two novel techniques for visualization of tunnels in complex molecules of proteins. Long-term research in the field of protein analysis proved that the reactivity of the protein molecule depends on the presence of tunnels. These structures are very important mainly in the process of finding new pharmaceuticals. Visualization of a tunnel is the next very important step after the analysis because it enables the biochemists to determine the crucial regions of the tunnel, which can have a substantial effect in the process of designing new medication. Previous methods for the visualization of tunnels define a tunnel as a set of intersecting spheres. Our approach exploits tetrahedra obtained from the process of tunnel analysis based on the Voronoi diagrams and Delaunay tetrahedrization. We proposed two novel algorithms that visualize a tunnel as a surface derived fromthe tetrahedra, which form the boundary constraint of the tunnel in the space of the molecule.
ER -
KOZLÍKOVÁ, Barbora, Filip ANDRES and Jiří SOCHOR. Visualization of Tunnels in Protein Molecules. In \textit{Computer graphics, virtual reality, visualisation and interaction in Africa AFRIGRAPH '07}. October 2007. Grahamstown, South Africa: ACM, 2007, p.~111-118. ISBN~978-1-59593-906-7.
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