p 2005

Analysis of biomedical image data acquired using optical microscopy

KOZUBEK, Michal, Pavel MATULA, Petr MATULA and David SVOBODA

Basic information

Original name

Analysis of biomedical image data acquired using optical microscopy

Name in Czech

Analýza biomedicínských dat získaných pomocí optické mikroskopie

Authors

KOZUBEK, Michal (203 Czech Republic, guarantor), Pavel MATULA (203 Czech Republic), Petr MATULA (203 Czech Republic) and David SVOBODA (203 Czech Republic)

Edition

1st International Summer School on Computational Biology, 2005

Other information

Language

English

Type of outcome

Vyžádané přednášky

Field of Study

10201 Computer sciences, information science, bioinformatics

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

RIV identification code

RIV/00216224:14330/05:00028398

Organization unit

Faculty of Informatics

Keywords in English

optical microscopy; image analysis

Tags

Tags

International impact
Změněno: 8/4/2010 13:22, doc. RNDr. Petr Matula, Ph.D.

Abstract

ORIG CZ

V originále

Biomedical image data can be produced by different instruments. In hospitals the most frequent source of such data are computer tomography (CT) of the brain, magnetic resonance imaging (MRI), ultrasound imaging or X-ray imag-ing. For research purposes, however, the most frequent instrument is an optical microscope (typically cells or their components are stained, observed in a fluorescence microscope, their image is recorded using a CCD camera, trans-ferred to computer memory and analysed by computer). Analysis of biomedical image data is a good example of a problem that needs collaboration of experts in biology, mathematics and computer science (or experts with knowl-edge in all these disciplines). In the case of optical microscopy also expertise in physics (optics) is an advantage. An example of a laboratory that attends to the analysis of biomedical image data acquired using optical microscopy and that gathers experts in the above-mentioned disciplines is Laboratory of Optical Microscopy at Masaryk University. This talk summarizes scientific problems solved in this laboratory.

In Czech

Přednáška se zabývá analýzou biomedicínských dat získaných pomocí optické mikroskopie.

Links

GA202/04/0907, research and development project
Name: Cytometrie s vysokým rozlišením na živých buňkách
Investor: Czech Science Foundation, High-resolution cytometry of living cells
IAA5004306, research and development project
Name: Struktura lidského genomu
Investor: Academy of Sciences of the Czech Republic, Human genome structure
MSM0021622419, plan (intention)
Name: Vysoce paralelní a distribuované výpočetní systémy
Investor: Ministry of Education, Youth and Sports of the CR, Highly Parallel and Distributed Computing Systems