MATULA, Petr, Michal KOZUBEK, Pavel MATULA, Miroslav VAŘECHA, Jana AMRICHOVÁ, Vladan ONDŘEJ, Emilie LUKÁŠOVÁ and Stanislav KOZUBEK. Automated confocal live cell microscopy based on spinning disks. In 6th International ELMI Meeting and Workshop on Advanced Light Microscopy: Abstract Book. 2006.
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Basic information
Original name Automated confocal live cell microscopy based on spinning disks
Name in Czech Automatizovaná konfokální mikroskopie živých buněk na bázi rotujících disků
Authors MATULA, Petr (203 Czech Republic), Michal KOZUBEK (203 Czech Republic, guarantor), Pavel MATULA (203 Czech Republic), Miroslav VAŘECHA (203 Czech Republic), Jana AMRICHOVÁ (203 Czech Republic), Vladan ONDŘEJ (203 Czech Republic), Emilie LUKÁŠOVÁ (203 Czech Republic) and Stanislav KOZUBEK (203 Czech Republic).
Edition 6th International ELMI Meeting and Workshop on Advanced Light Microscopy: Abstract Book, 2006.
Other information
Original language English
Type of outcome Conference abstract
Field of Study 20200 2.2 Electrical engineering, Electronic engineering, Information engineering
Country of publisher Portugal
Confidentiality degree is not subject to a state or trade secret
RIV identification code RIV/00216224:14330/06:00033148
Organization unit Faculty of Informatics
Keywords in English confocal microscopy; image processing
Tags confocal microscopy, image processing
Tags International impact, Reviewed
Changed by Changed by: Mgr. Miroslav Vařecha, Ph.D., učo 82780. Changed: 19/10/2010 11:27.
Abstract
The successful development of non-invasive quantitative visualization techniques for live cell imaging have led to the development of suitable hardware and software for the acquisition and processing of multidimensional image data. Confocal spinning disk systems (based either on a classical Nipkow disk or on the microlens principle) are especially suitable for live cell imaging thanks to high acquisition speed (parallel imaging of thousands of points), high quality image detection (up to 90% quantum efficiency at negligible noise levels with state-of-the-art cameras), low photobleaching and low phototoxicity. Lately, we have been working on the optimization and automation of image acquisition and processing for this type of microscopy. This poster presents full description of our hardware set-up and several applications from live cell imaging that are carried out on this set-up in our laboratory. Special attention is paid to a novel image registration method for the detection and correction of global movement of a cell nucleus in a time-lapse series. The registration method is point-based, precise and efficient. The method can also be used as an initial estimate of matching objects in succesive images in time-lapse series. It has been successfully applied for studying motion of HP1 proteins and telomeres. This research has been supported by the Ministry of Education of the Czech Republic (Projects No. MSM0021622419 and No. LC535).
Abstract (in Czech)
Příspěvek se zabývá automatizovanou konfokální mikroskopií živých buněk na bázi rotujících disků.
Links
LC535, research and development projectName: Dynamika a organizace chromosomů během buněčného cyklu v normě a patologii
Investor: Ministry of Education, Youth and Sports of the CR, Dynamika a organizace chromosomů během buněčného cyklu v normě a patologii
MSM0021622419, plan (intention)Name: Vysoce paralelní a distribuované výpočetní systémy
Investor: Ministry of Education, Youth and Sports of the CR, Highly Parallel and Distributed Computing Systems
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