KOČA, Jaroslav. In silico and In vitro Protein Engineering as a Bioanalytical Tool. In CECE 2007. Brno: JAC, 2007, p. 22-22.
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Basic information
Original name In silico and In vitro Protein Engineering as a Bioanalytical Tool
Name in Czech In silico a In vitro proteinové inženýrství jako bioanalytický nástroj
Authors KOČA, Jaroslav.
Edition Brno, CECE 2007, p. 22-22, 1 pp. 2007.
Publisher JAC
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 10610 Biophysics
Country of publisher Czech Republic
Confidentiality degree is not subject to a state or trade secret
Organization unit Faculty of Science
Keywords in English protein enginnering lectin in silico
Changed by Changed by: prof. RNDr. Jaroslav Koča, DrSc., učo 610. Changed: 4/2/2008 16:42.
Abstract
Protein engineering is a procedure of developing useful or valuable proteins by mutations of residues. It is usually performed in vitro, when the original DNA is mutated, incorporated into host cells (usually E. coli) and the resulting protein with mutated residues is expressed. It can also be performed in silico, when mutations are performed on a model in a computer. Our effort is to connect both approaches to increase efficiency of the procedure. In our case, the engineered molecules are called lectins, nonenzymatic proteins that recognize carbohydrates. The lecture will be mainly focused on in silico part of the procedure, which is performed by the program TRITON developed in our laboratory. During this procedure, mutants are automatically generated, refined and their affinity and specificity is predicted. The method is then complemented by in vitro approaches that finish with thermodynamic and kinetic measurements.
Abstract (in Czech)
In silico a In vitro proteinové inženýrství jako bioanalytický nástroj
Links
MSM0021622413, plan (intention)Name: Proteiny v metabolismu a při interakci organismů s prostředím
Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment
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