J 2008

TRITON: a graphical tool for ligand-binding protein engineering

PROKOP, Martin, Jan ADAM, Zdeněk KŘÍŽ, Michaela WIMMEROVÁ, Jaroslav KOČA et. al.

Basic information

Original name

TRITON: a graphical tool for ligand-binding protein engineering

Name in Czech

TRITON: a graphical tool for ligand-binding protein engineering

Authors

PROKOP, Martin (203 Czech Republic), Jan ADAM (203 Czech Republic), Zdeněk KŘÍŽ (203 Czech Republic), Michaela WIMMEROVÁ (203 Czech Republic) and Jaroslav KOČA (203 Czech Republic, guarantor)

Edition

Bioinformatics, Oxford University Press, 2008, 1367-4803

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 4.328

RIV identification code

RIV/00216224:14310/08:00024908

Organization unit

Faculty of Science

UT WoS

000258860700021

Keywords in English

software development; protein engineering; protein-ligand docking;

Tags

International impact, Reviewed
Změněno: 24/6/2009 12:57, prof. RNDr. Michaela Wimmerová, Ph.D.

Abstract

V originále

Summary: The new version of the TRITON program provides user-friendly graphical tools for modeling protein mutants using the external program MODELLER and for docking ligands into the mutants using the external program AutoDock. TRITON can now be used to design ligand-binding proteins, to study protein-ligand binding mechanisms or simply to dock any ligand to a protein. Availability: Executable files of TRITON are available free of charge for academic users at http://ncbr.chemi.muni.cz/triton/ Contact: triton@chemi.muni.cz Supplementary information: Supplementary data are available at Bioinformatics online.

In Czech

Summary: The new version of the TRITON program provides user-friendly graphical tools for modeling protein mutants using the external program MODELLER and for docking ligands into the mutants using the external program AutoDock. TRITON can now be used to design ligand-binding proteins, to study protein-ligand binding mechanisms or simply to dock any ligand to a protein. Availability: Executable files of TRITON are available free of charge for academic users at http://ncbr.chemi.muni.cz/triton/ Contact: triton@chemi.muni.cz Supplementary information: Supplementary data are available at Bioinformatics online.

Links

GA303/06/0570, research and development project
Name: Strukturně-funkční studie lektinů a adhezinů patogenních mikroorganismů
Investor: Czech Science Foundation, Structure-function studies on lectins and adhesins from microbial patogens
LC06030, research and development project
Name: Biomolekulární centrum
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular centre
MSM0021622413, plan (intention)
Name: Proteiny v metabolismu a při interakci organismů s prostředím
Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment