Quantification of retrotransposon in Festuca pallens population varying in genome size
| ŠMERDA, Jakub, Petr ŠMARDA, Lucie HOROVÁ and Petr BUREŠ. Quantification of retrotransposon in Festuca pallens population varying in genome size. In The Comparative Biology of Monocotyledons. 2008. ISBN 978-87-87772-03-7. |
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| Basic information | |
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| Original name | Quantification of retrotransposon in Festuca pallens population varying in genome size |
| Name in Czech | Kvantifikace retrostransposonů v populaci Festuca pallens s variabilní velikostí genomu |
| Authors | ŠMERDA, Jakub (203 Czech Republic, guarantor, belonging to the institution), Petr ŠMARDA (203 Czech Republic, belonging to the institution), Lucie HOROVÁ (203 Czech Republic, belonging to the institution) and Petr BUREŠ (203 Czech Republic, belonging to the institution). |
| Edition | The Comparative Biology of Monocotyledons, 2008. |
| Other information | |
|---|---|
| Original language | English |
| Type of outcome | Conference abstract |
| Field of Study | 10600 1.6 Biological sciences |
| Country of publisher | Denmark |
| Confidentiality degree | is not subject to a state or trade secret |
| RIV identification code | RIV/00216224:14310/08:00024946 |
| Organization unit | Faculty of Science |
| ISBN | 978-87-87772-03-7 |
| Keywords in English | Ty1-copia; Ty3-gypsy; quantitative PCR |
| Tags | quantitative PCR, Ty1-copia, Ty3-gypsy |
| Tags | International impact |
| Changed by | Changed by: prof. RNDr. Petr Bureš, Ph.D., učo 2635. Changed: 26/3/2019 22:16. |
| Abstract |
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| Variation in genome size found within species and populations offers unique possibility to study ongoing processes of genome size evolution. In a Festuca pallens population with the constant chromosome number we documented recently a high variation in genome size (up to 1.188-fold) that we assume to be a probable consequence of recent retrotransposon activity. Here we tested this hypothesis by studying sequence diversity and copy number of some candidate retrotransposon types in several seedlings with constrasting genome sizes. |
| Abstract (in Czech) |
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| Variation in genome size found within species and populations offers unique possibility to study ongoing processes of genome size evolution. In a Festuca pallens population with the constant chromosome number we documented recently a high variation in genome size (up to 1.188-fold) that we assume to be a probable consequence of recent retrotransposon activity. Here we tested this hypothesis by studying sequence diversity and copy number of some candidate retrotransposon types in several seedlings with constrasting genome sizes. |
| Links | |
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| GP206/08/P222, research and development project | Name: Evoluce GC obsahu a genomu trav |
| Investor: Czech Science Foundation, GC content and genome evolution of grasses | |
| LC06073, research and development project | Name: Centrum pro výzkum biodiverzity |
| Investor: Ministry of Education, Youth and Sports of the CR, Biodiversity Research Center | |
| MSM0021622416, plan (intention) | Name: Diverzita biotických společenstev a populací: kauzální analýza variability v prostoru a čase |
| Investor: Ministry of Education, Youth and Sports of the CR, Diversity of Biotic Communities and Populations: Causal Analysis of variation in space and time | |
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