| SARZYNSKA, Joanna, Kamila REBLOVA, Jiri SPONER and Tadeusz KULINSKI. Conformational Transitions of Flanking Purines in HIV-1 RNA Dimerization Initiation Site Kissing Complexes Studied by Charmm Explicit Solvent Molecular Dynamics. Biopolymers. Wiley InterScience, 2008, vol. 89, No 9, p. 732-746, 13 pp. ISSN 0006-3525. |
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@article{784616,
author = {Sarzynska, Joanna and Reblova, Kamila and Sponer, Jiri and Kulinski, Tadeusz},
article_number = {9},
keywords = {molecular dynamics methods; RNA},
language = {eng},
issn = {0006-3525},
journal = {Biopolymers},
title = {Conformational Transitions of Flanking Purines in HIV-1 RNA Dimerization Initiation Site Kissing Complexes Studied by Charmm Explicit Solvent Molecular Dynamics},
volume = {89},
year = {2008}
}
TY - JOUR
ID - 784616
AU - Sarzynska, Joanna - Reblova, Kamila - Sponer, Jiri - Kulinski, Tadeusz
PY - 2008
TI - Conformational Transitions of Flanking Purines in HIV-1 RNA Dimerization Initiation Site Kissing Complexes Studied by Charmm Explicit Solvent Molecular Dynamics
JF - Biopolymers
VL - 89
IS - 9
SP - 732-746
EP - 732-746
PB - Wiley InterScience
SN - 00063525
KW - molecular dynamics methods
KW - RNA
N2 - Study of flanking bases in RNA kissing loop complexes using Charmm force field shows good agreement with experiments carried out by Amber and with X-ray crystalography. The study describes multiple conformations, which flanking bases may adopt on nanosecond time scale.
ER -
SARZYNSKA, Joanna, Kamila REBLOVA, Jiri SPONER and Tadeusz KULINSKI. Conformational Transitions of Flanking Purines in HIV-1 RNA Dimerization Initiation Site Kissing Complexes Studied by Charmm Explicit Solvent Molecular Dynamics. \textit{Biopolymers}. Wiley InterScience, 2008, vol.~89, No~9, p.~732-746, 13 pp. ISSN~0006-3525.
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