A 2008

A Multidetection Platform for Proteome Analysis

PREISLER, Jan, Ondřej PEŠ, Pavla FOLTYNOVÁ, Tomáš VACULOVIČ, Pavel KRÁSENSKÝ et. al.

Basic information

Original name

A Multidetection Platform for Proteome Analysis

Name in Czech

Multidetekční platforma pro výzkum proteomu

Authors

PREISLER, Jan (203 Czech Republic, guarantor, belonging to the institution), Ondřej PEŠ (203 Czech Republic, belonging to the institution), Pavla FOLTYNOVÁ (203 Czech Republic, belonging to the institution), Tomáš VACULOVIČ (203 Czech Republic, belonging to the institution), Pavel KRÁSENSKÝ (203 Czech Republic, belonging to the institution), Viktor KANICKÝ (203 Czech Republic, belonging to the institution) and Radek VYHNÁNEK (203 Czech Republic, belonging to the institution)

Edition

Innsbruck, Austria, 8th Csaba Horváth Medal Award Symposium, 2008

Publisher

University of Innsbruck

Other information

Language

English

Type of outcome

Audiovizuální tvorba

Field of Study

10406 Analytical chemistry

Country of publisher

Austria

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

RIV identification code

RIV/00216224:14310/08:00026591

Organization unit

Faculty of Science

Keywords in English

off-line coupling; capillary electrophoresis; mass spectrometry; MALDI; ICP; LIF; proteins

Tags

International impact
Změněno: 9/4/2013 12:44, prof. Mgr. Jan Preisler, Ph.D.

Abstract

V originále

An instrumentation platform based on a universal interface for deposition of CE or microLC eluent on a target of a MALDI mass spectrometer will be described. The deposited fractions of proteins or peptides may be analyzed in off-line mode using MALDI mass or tandem mass spectrometry (MS or MS/MS) and native laser-induced fluorescence (LIF) detection or subjected to on-target reactions, such as digestion for protein identification. An additional detection mode is inductively coupled plasma mass spectrometry (ICP MS), nature of which is complementary to soft MALDI MS. We propose substrate assisted laser desorption (SALD) of sample from the target and sample transfer to ICP. Thus, both information about protein identity and content of elements, such as metals or phosphorus are available from a single separation record. Using the platform, sub-picomolar quantities of proteins are detected, digested and identified directly on MALDI target. LIF detection of protein bands is found to be sensitive, fast and generally useful for tryptophan-containing proteins. Although not as sensitive as the on-column LIF detection, on-target LIF detection may be used to select fractions containing proteins. Consequently on-target peptide mass fingerprinting is carried out to identify protein in the selected fractions. For the SALD ICP MS detection, influence of desorption laser fluence, presence of additives or role of substrate is discussed. Selected metals are detected in sub-picomolar amounts. MALD-ICP MS analysis of chromium species (Cr3+ and CrO42-) will be shown to demonstrate the coupling for metal analysis. High separation efficiency is maintained due to the employed liquid junction and fraction deposition.

In Czech

Viz anglický abstrakt

Links

LC06035, research and development project
Name: Centrum biofyzikální chemie, bioelektrochemie a bioanalýzy. Nové nástroje pro genomiku, proteomiku a biomedicínu.
Investor: Ministry of Education, Youth and Sports of the CR, Centre of Biophysical Chemistry, Bioelectrochemistry and Bioanalysis. New Tools for Genomics, Proteomics and Biomedicine
MSM0021622415, plan (intention)
Name: Molekulární podstata buněčných a tkáňových regulací
Investor: Ministry of Education, Youth and Sports of the CR, Molecular basis of cell and tissue regulations