D 2008

C-13 Relaxation Studies of RNA Dynamics: Challenges and Solutions

KADEŘÁVEK, Pavel and Radovan FIALA

Basic information

Original name

C-13 Relaxation Studies of RNA Dynamics: Challenges and Solutions

Name in Czech

Studium dynamiky RNA pomocí relaxace C-13: Problémy a jejich řešení

Edition

San Diego, XXIII International Conference on Magnetic Resonance in Biological Systems, p. 117-117, 2008

Publisher

ICMRBS

Other information

Language

English

Type of outcome

Proceedings paper

Field of Study

10610 Biophysics

Country of publisher

United States of America

Confidentiality degree

is not subject to a state or trade secret

Organization unit

Faculty of Science

Keywords in English

NMR; nucleic acids;RNA;dynamics

Tags

International impact
Changed: 11/12/2008 13:16, doc. RNDr. Radovan Fiala, CSc.

Abstract

V originále

NMR relaxation experiments provide a way of monitoring molecular dynamics with atomic resolution. However, the measurement of 13C relaxation rates and their interpretation faces serious challenges. We have modified the Model-Free procedure to explicitly take into account asymmetric character of the carbon chemical shielding tensors and the effect of neighboring nuclei. The extended version of the Model-Free analysis generally produces more realistic values of the order parameter.

In Czech

NMR relaxation experiments provide a way of monitoring molecular dynamics with atomic resolution. However, the measurement of 13C relaxation rates and their interpretation faces serious challenges. We have modified the Model-Free procedure to explicitly take into account asymmetric character of the carbon chemical shielding tensors and the effect of neighboring nuclei. The extended version of the Model-Free analysis generally produces more realistic values of the order parameter.

Links

LC06030, research and development project
Name: Biomolekulární centrum
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular centre
MSM0021622413, plan (intention)
Name: Proteiny v metabolismu a při interakci organismů s prostředím
Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment