R 2008

CAVER 2.0

MEDEK, Petr, Petr BENEŠ, Barbora KOZLÍKOVÁ, Eva CHOVANCOVÁ, Antonín PAVELKA et. al.

Basic information

Original name

CAVER 2.0

Name in Czech

CAVER 2.0

Authors

MEDEK, Petr (203 Czech Republic), Petr BENEŠ (203 Czech Republic), Barbora KOZLÍKOVÁ (203 Czech Republic), Eva CHOVANCOVÁ (203 Czech Republic), Antonín PAVELKA (203 Czech Republic), Tibor SZABÓ (703 Slovakia), Matúš ZAMBORSKÝ (703 Slovakia), Filip ANDRES (203 Czech Republic, guarantor), Martin KLVAŇA (203 Czech Republic), Jan BREZOVSKÝ (203 Czech Republic), Jiří SOCHOR (203 Czech Republic) and Jiří DAMBORSKÝ (203 Czech Republic)

Edition

2008

Other information

Language

English

Type of outcome

Software

Field of Study

10600 1.6 Biological sciences

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

RIV identification code

RIV/00216224:14310/08:00024501

Organization unit

Faculty of Science

Keywords (in Czech)

tunel výpočet

Keywords in English

tunnel calculation

Technical parameters

computer program

Tags

Tags

International impact
Změněno: 2/7/2009 11:27, prof. Mgr. Jiří Damborský, Dr.

Abstract

ORIG CZ

V originále

CAVER provides rapid, accurate and fully automated calculation of pathways leading from buried cavities to outside solvent in protein structures. Study of these pathways is important in drug design and molecular enzymology. CAVER facilitates analysis of any molecular structure including proteins, nucleic acids, inorganic materials, and is available as online version or PyMOL plugin. CAVER Viewer enables efficient visualization of calculated pathways and can be run online using Java Web Start technology.

In Czech

CAVER poskytuje rychlý a přesný výpočet tunelů v proteinech.

Links

GA201/07/0927, research and development project
Name: Vizualizace proteinových struktur
Investor: Czech Science Foundation, Visualization of protein structures
IAA100040602, research and development project
Name: Nové přístupy v elektrochemické analýze nukleových kyselin a oligonukleotidů zaměřené na ultrasensitivní mikrodetekci DNA a detekci DNA hybridizace.
Investor: Academy of Sciences of the Czech Republic, New approaches in electrochemical analysis of nucleic acids and oligonucleotides aimed at a ultrasensitive microdetection of DNA and DNA hybridization
LC06010, research and development project
Name: Centrum biokatalýzy a biotransformací
Investor: Ministry of Education, Youth and Sports of the CR, Center of Biocatalysis and Biotransformation
MSM0021622412, plan (intention)
Name: Interakce mezi chemickými látkami, prostředím a biologickými systémy a jejich důsledky na globální, regionální a lokální úrovni (INCHEMBIOL) (Acronym: INCHEMBIOL)
Investor: Ministry of Education, Youth and Sports of the CR, Interactions among the chemicals, environment and biological systems and their consequences on the global, regional and local scales (INCHEMBIOL)