| MATULA, Petr, Fatima VERISSIMO, Stefan WÖRZ, Roland EILS, Rainer PEPPERKOK and Karl ROHR. Quantification of Fluorescent Spots in Time Series of 3D Confocal Microscopy Images of Endoplasmic Reticulum Exit Sites Based on the HMAX Transform. In Proceedings of SPIE Medical Imaging. Neuveden: Neuveden, 2010, 7 pp. ISBN 978-0-8194-8027-9. |
Other formats:
BibTeX
LaTeX
RIS
@inproceedings{855563,
author = {Matula, Petr and Verissimo, Fatima and Wörz, Stefan and Eils, Roland and Pepperkok, Rainer and Rohr, Karl},
address = {Neuveden},
booktitle = {Proceedings of SPIE Medical Imaging},
keywords = {Fluorescence microscopy; spot detection; HMAX transform; endoplasmic reticulum exit sites},
language = {eng},
location = {Neuveden},
isbn = {978-0-8194-8027-9},
note = {Vol. 7626},
publisher = {Neuveden},
title = {Quantification of Fluorescent Spots in Time Series of 3D Confocal Microscopy Images of Endoplasmic Reticulum Exit Sites Based on the HMAX Transform},
url = {http://spie.org/x648.html?product_id=844441},
year = {2010}
}
TY - JOUR
ID - 855563
AU - Matula, Petr - Verissimo, Fatima - Wörz, Stefan - Eils, Roland - Pepperkok, Rainer - Rohr, Karl
PY - 2010
TI - Quantification of Fluorescent Spots in Time Series of 3D Confocal Microscopy Images of Endoplasmic Reticulum Exit Sites Based on the HMAX Transform
PB - Neuveden
CY - Neuveden
SN - 9780819480279
N1 - Vol. 7626
KW - Fluorescence microscopy
KW - spot detection
KW - HMAX transform
KW - endoplasmic reticulum exit sites
UR - http://spie.org/x648.html?product_id=844441
N2 - We present an approach for the quantification of fluorescent spots in time series of 3-D confocal microscopy images of endoplasmic reticulum exit sites of dividing cells. Fluorescent spots are detected based on extracted image regions of highest response using the HMAX transform and prior convolution of the 3-D images with a Gaussian kernel. The sensitivity of the involved parameters was studied and a quantitative evaluation using both 3-D synthetic and 3-D real data was performed. The approach was successfully applied to more than one thousand 3-D confocal microscopy images.
ER -
MATULA, Petr, Fatima VERISSIMO, Stefan WÖRZ, Roland EILS, Rainer PEPPERKOK and Karl ROHR. Quantification of Fluorescent Spots in Time Series of 3D Confocal Microscopy Images of Endoplasmic Reticulum Exit Sites Based on the HMAX Transform. In \textit{Proceedings of SPIE Medical Imaging}. Neuveden: Neuveden, 2010, 7 pp. ISBN~978-0-8194-8027-9.
|
