1H, 13C, and 15N chemical shift assignments of ZCCHC9

SAŇUDO ARCE, Maria, Martin JACKO, Christiane RAMMELT, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. 1H, 13C, and 15N chemical shift assignments of ZCCHC9. Biomolecular NMR Assignments. SPRINGER, 2010, vol. 5, No 1, p. 19-21. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-010-9257-2.

Basic information

• Original name: 1H, 13C, and 15N chemical shift assignments of ZCCHC9
• Authors: SAŇUDO ARCE, Maria (724 Spain, belonging to the institution), Martin JACKO (203 Czech Republic, belonging to the institution), Christiane RAMMELT (756 Switzerland), Štěpánka VAŇÁČOVÁ (203 Czech Republic, belonging to the institution) and Richard ŠTEFL (203 Czech Republic, guarantor, belonging to the institution).
• Edition: Biomolecular NMR Assignments, SPRINGER, 2010, 1874-2718.

Other information

• Original language: English
• Type of outcome: Article in a journal
• Field of Study: Genetics and molecular biology
• Country of publisher: United States of America
• Confidentiality degree: is not subject to a state or trade secret
• WWW: URL
• Impact factor: Impact factor: 0.707
• RIV identification code: RIV/00216224:14310/10:00040608
• Organization unit: Faculty of Science
• Doi: http://dx.doi.org/10.1007/s12104-010-9257-2
• UT WoS: 000288076300005
• Keywords in English: ZCCHC9; Zinc knuckle; CCHC; RNA degradation
• Tags: ok
• Tags: International impact, Reviewed

Abstract

ZCCHC9 is a human nuclear protein with sequence homology to yeast Air1p/Air2p proteins which are RNA-binding subunits of the Trf4/Air2/Mtr4 polyadenylation (TRAMP) complex involved in nuclear RNA quality control and degradation in yeast. The ZCCHC9 protein contains four retroviral-type zinc knuckle motifs. Here, we report the NMR spectral assignment of the zinc knuckle region of ZCCHC9. These data will allow performing NMR structural and RNA-binding studies of ZCCHC9 with the aim to investigate its role in the RNA quality control in human.

Links

• GAP305/10/1490, research and development project: Name: Strukturní podstata ukončení transkripce nezávislé na poly(A) signálu

Investor: Czech Science Foundation

• GA204/08/1212, research and development project: Name: Strukturní studium interakcí mezi proteiny a RNA účastnící se v mechanismu kontroly kvality RNA

Investor: Czech Science Foundation, Structural studies of protein-RNA complexes involved in RNA quality control

• IAA401630903, research and development project: Name: Strukturní podstata mechanismu ukončení transkripce nepolyadenylovaných transkriptů

Investor: Academy of Sciences of the Czech Republic, Structural basis for transcription termination of nonpolyadenylated transcripts

• LA08008, research and development project: Name: Strukturní studium interakcí mezi bíkovinami a poškozenou RNA.

Investor: Ministry of Education, Youth and Sports of the CR, Structural studies of protein-RNA complexes involved in RNA quality control

• MSM0021622413, plan (intention): Name: Proteiny v metabolismu a při interakci organismů s prostředím

Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment

• 084316/Z/07/Z, interní kód MU: Name: Polyadenylation and mechanisms of nuclear RNA quality control

Investor: Wellcome Trust, Polyadenylation and mechanisms of nuclear RNA quality control

• 1263, interní kód MU: Name: EMBO Young Investigator Programme (Acronym: EMBO)

Investor: EMBO (European Molecular Biology Organization), EMBO Young Investigator Programme

• 1642, interní kód MU: Name: EMBO Young Investigator Programme (Acronym: EMBO)

Investor: EMBO (European Molecular Biology Organization), EMBO Young Investigator Programme

• 205872, interní kód MU: Name: Program developing interdisciplinary research POtential for the STudies of BIOMolecular INteractions (Acronym: POSTBIOMIN)

Investor: European Union, Program developing interdisciplinary research POtential for the STudies of BIOMolecular INteractions, Capacities