1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II

KUBÍČEK, Karel, Josef PASULKA, Hana ČERNÁ, Frank LÖHR and Richard ŠTEFL. 1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II. Biomolecular NMR Assignments. Netherlands: Springer Netherlands, 2011, vol. 5, No 2, p. 203-205. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-011-9300-y.

Basic information

• Original name: 1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II
• Name in Czech: Přířazení 1H, 13C, 15N rezonančních frekvencí CTD interagující domény proteinu Nrd1 v komplexu s 5pSer CTD RNA polymerázy II
• Authors: KUBÍČEK, Karel (203 Czech Republic, belonging to the institution), Josef PASULKA (203 Czech Republic, belonging to the institution), Hana ČERNÁ (203 Czech Republic, belonging to the institution), Frank LÖHR (276 Germany) and Richard ŠTEFL (203 Czech Republic, guarantor, belonging to the institution).
• Edition: Biomolecular NMR Assignments, Netherlands, Springer Netherlands, 2011, 1874-2718.

Other information

• Original language: English
• Type of outcome: Article in a journal
• Field of Study: 10610 Biophysics
• Country of publisher: Netherlands
• Confidentiality degree: is not subject to a state or trade secret
• WWW: URL
• Impact factor: Impact factor: 0.720
• RIV identification code: RIV/00216224:14740/11:00049411
• Organization unit: Central European Institute of Technology
• Doi: http://dx.doi.org/10.1007/s12104-011-9300-y
• UT WoS: 000294559700018
• Keywords (in Czech): doména interagující s CTD (CID), CTD; zpracování RNA; ukončení transkripce
• Keywords in English: CTD-interacting domain (CID); CTD; RNA-processing; transcription termination
• Tags: ok, rivok
• Tags: International impact, Reviewed

Abstract

In this article, we report the resonance assignment of CTD-interacting domain (CID) of pre-mRNA down-regulation (Nrd)1 bound to Ser5-phosphorylated CTD (pSer5) of RNA Polymerase II. The presented assignment of backbone and side-chain resonances of the Nrd1 CID proton, carbon and nitrogen nuclei will allow studies of the structure and interaction of CID with carboxy-terminal domain (CTD) of the RNA polymerase II

Links

• GAP305/10/1490, research and development project: Name: Strukturní podstata ukončení transkripce nezávislé na poly(A) signálu

Investor: Czech Science Foundation

• GA204/08/1212, research and development project: Name: Strukturní studium interakcí mezi proteiny a RNA účastnící se v mechanismu kontroly kvality RNA

Investor: Czech Science Foundation, Structural studies of protein-RNA complexes involved in RNA quality control

• IAA401630903, research and development project: Name: Strukturní podstata mechanismu ukončení transkripce nepolyadenylovaných transkriptů

Investor: Academy of Sciences of the Czech Republic, Structural basis for transcription termination of nonpolyadenylated transcripts

• LA08008, research and development project: Name: Strukturní studium interakcí mezi bíkovinami a poškozenou RNA.

Investor: Ministry of Education, Youth and Sports of the CR, Structural studies of protein-RNA complexes involved in RNA quality control

• MSM0021622413, plan (intention): Name: Proteiny v metabolismu a při interakci organismů s prostředím

Investor: Ministry of Education, Youth and Sports of the CR, Proteins in metabolism and interaction of organisms with the environment