J 2011

Reconstitution of DNA repair synthesis in vitro and the role of polymerase and helicase activities

ŠEBESTA, Marek, Peter BURKOVICS, Lajos HARACSKA and Lumír KREJČÍ

Basic information

Original name

Reconstitution of DNA repair synthesis in vitro and the role of polymerase and helicase activities

Authors

ŠEBESTA, Marek (703 Slovakia, belonging to the institution), Peter BURKOVICS (348 Hungary), Lajos HARACSKA (348 Hungary) and Lumír KREJČÍ (203 Czech Republic, guarantor, belonging to the institution)

Edition

DNA Repair, 2011, 1568-7864

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

Genetics and molecular biology

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 4.135

RIV identification code

RIV/00216224:14110/11:00049878

Organization unit

Faculty of Medicine

DOI

http://dx.doi.org/10.1016/j.dnarep.2011.03.003

UT WoS

000292440800002

Keywords in English

DNA repair; Recombination; DNA synthesis; Replication; Mph1 Srs2

Tags

International impact
Změněno: 22/3/2012 15:13, Mgr. Michal Petr

Abstract

V originále

The error-free repair of double-strand DNA breaks by homologous recombination (HR) ensures genomic stability using undamaged homologous sequence to copy genetic information. While some of the aspects of the initial steps of HR are understood, the molecular mechanisms underlying events downstream of the D-loop formation remain unclear. Therefore, we have reconstituted D-loop-based in vitro recombinationassociated DNA repair synthesis assay and tested the efficacy of polymerases Pol and Pol to extend invaded primer, and the ability of three helicases (Mph1, Srs2 and Sgs1) to displace this extended primer. Both Pol and Pol extended up to 50% of the D-loop substrate, but differed in product length and dependency on proliferating cell nuclear antigen (PCNA). Mph1, but not Srs2 or Sgs1, displaced the extended primer very efficiently, supporting putative role ofMph1in promoting the synthesis-dependent strand-annealing pathway. The experimental system described here can be employed to increase our understanding of HR events following D-loop formation, as well as the regulatory mechanisms involved.

Links

GA301/09/1917, research and development project
Name: Štěpení replikačních-rekombinačních DNA meziproduktů a jejich úloha při nestabilitě genomu
Investor: Czech Science Foundation
GD203/09/H046, research and development project
Name: Biochemie na rozcestí mezi in silico a in vitro
Investor: Czech Science Foundation
LC06030, research and development project
Name: Biomolekulární centrum
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular centre
ME10048, research and development project
Name: Vliv post-translačních modifikací na DNA opravu a rekombinaci.
Investor: Ministry of Education, Youth and Sports of the CR, Research and Development Programme KONTAKT (ME)
Displayed: 19/10/2024 22:30