ŠEBESTA, Marek, Peter BURKOVICS, Lajos HARACSKA and Lumír KREJČÍ. Reconstitution of DNA repair synthesis in vitro and the role of polymerase and helicase activities. DNA Repair. 2011, vol. 10, No 6, p. 567-576. ISSN 1568-7864. Available from: https://dx.doi.org/10.1016/j.dnarep.2011.03.003.
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Basic information
Original name Reconstitution of DNA repair synthesis in vitro and the role of polymerase and helicase activities
Authors ŠEBESTA, Marek (703 Slovakia, belonging to the institution), Peter BURKOVICS (348 Hungary), Lajos HARACSKA (348 Hungary) and Lumír KREJČÍ (203 Czech Republic, guarantor, belonging to the institution).
Edition DNA Repair, 2011, 1568-7864.
Other information
Original language English
Type of outcome Article in a journal
Field of Study Genetics and molecular biology
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
Impact factor Impact factor: 4.135
RIV identification code RIV/00216224:14110/11:00049878
Organization unit Faculty of Medicine
Doi http://dx.doi.org/10.1016/j.dnarep.2011.03.003
UT WoS 000292440800002
Keywords in English DNA repair; Recombination; DNA synthesis; Replication; Mph1 Srs2
Tags International impact
Changed by Changed by: Mgr. Michal Petr, učo 65024. Changed: 22/3/2012 15:13.
Abstract
The error-free repair of double-strand DNA breaks by homologous recombination (HR) ensures genomic stability using undamaged homologous sequence to copy genetic information. While some of the aspects of the initial steps of HR are understood, the molecular mechanisms underlying events downstream of the D-loop formation remain unclear. Therefore, we have reconstituted D-loop-based in vitro recombinationassociated DNA repair synthesis assay and tested the efficacy of polymerases Pol and Pol to extend invaded primer, and the ability of three helicases (Mph1, Srs2 and Sgs1) to displace this extended primer. Both Pol and Pol extended up to 50% of the D-loop substrate, but differed in product length and dependency on proliferating cell nuclear antigen (PCNA). Mph1, but not Srs2 or Sgs1, displaced the extended primer very efficiently, supporting putative role ofMph1in promoting the synthesis-dependent strand-annealing pathway. The experimental system described here can be employed to increase our understanding of HR events following D-loop formation, as well as the regulatory mechanisms involved.
Links
GA301/09/1917, research and development projectName: Štěpení replikačních-rekombinačních DNA meziproduktů a jejich úloha při nestabilitě genomu
Investor: Czech Science Foundation
GD203/09/H046, research and development projectName: Biochemie na rozcestí mezi in silico a in vitro
Investor: Czech Science Foundation
LC06030, research and development projectName: Biomolekulární centrum
Investor: Ministry of Education, Youth and Sports of the CR, Biomolecular centre
ME10048, research and development projectName: Vliv post-translačních modifikací na DNA opravu a rekombinaci.
Investor: Ministry of Education, Youth and Sports of the CR, Research and Development Programme KONTAKT (ME)
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