CAVER 3.0: A Tool For Efficient Analysis Of Tunnels In Dynamic Protein Structures

CHOVANCOVÁ, Eva, Petr BENEŠ, Antonín PAVELKA, Petr MEDEK, Jan BREZOVSKÝ, Barbora KOZLÍKOVÁ, Martin KLVAŇA, Vilém ŠUSTR, Lada BIEDERMANNOVÁ, Ondřej STRNAD, Artur Wiktor GORA, Jiří SOCHOR and Jiří DAMBORSKÝ. CAVER 3.0: A Tool For Efficient Analysis Of Tunnels In Dynamic Protein Structures. In 3Dsig 2011, Structural Bioinformatics and Computational Biophysics, Vienna. 2011.

Basic information

• Original name: CAVER 3.0: A Tool For Efficient Analysis Of Tunnels In Dynamic Protein Structures
• Authors: CHOVANCOVÁ, Eva (203 Czech Republic, belonging to the institution), Petr BENEŠ (203 Czech Republic, belonging to the institution), Antonín PAVELKA (203 Czech Republic, belonging to the institution), Petr MEDEK (203 Czech Republic, belonging to the institution), Jan BREZOVSKÝ (203 Czech Republic, belonging to the institution), Barbora KOZLÍKOVÁ (203 Czech Republic, belonging to the institution), Martin KLVAŇA (203 Czech Republic, belonging to the institution), Vilém ŠUSTR (203 Czech Republic, belonging to the institution), Lada BIEDERMANNOVÁ (203 Czech Republic), Ondřej STRNAD (203 Czech Republic, belonging to the institution), Artur Wiktor GORA (616 Poland, belonging to the institution), Jiří SOCHOR (203 Czech Republic, belonging to the institution) and Jiří DAMBORSKÝ (203 Czech Republic, guarantor, belonging to the institution).
• Edition: 3Dsig 2011, Structural Bioinformatics and Computational Biophysics, Vienna, 2011.

Other information

• Original language: English
• Type of outcome: Presentations at conferences
• Field of Study: 10201 Computer sciences, information science, bioinformatics
• Country of publisher: Austria
• Confidentiality degree: is not subject to a state or trade secret
• RIV identification code: RIV/00216224:14310/11:00049454
• Organization unit: Faculty of Science
• Keywords in English: CAVER 3.0; Proteins Structure

Abstract

Poster "CAVER 3.0: A Tool For Efficient Analysis Of Tunnels In Dynamic Protein Structures"presented by Mgr. Chvancova on conference 3Dsig 2011, Structural Bioinformatics and Computational Biophysics in Vienna.

Links

• GAP202/10/1435, research and development project: Name: Analýza a vizualizace proteinových struktur

Investor: Czech Science Foundation, Analysis and Visualization of Protein Structures

• IAA401630901, research and development project: Name: Evoluce substrátové specifity u enzymů aktivních s xenobiotickými látkami

Investor: Academy of Sciences of the Czech Republic, Evolution of substrate specificity in enzymes acting on xenobiotic compounds

• LC06010, research and development project: Name: Centrum biokatalýzy a biotransformací

Investor: Ministry of Education, Youth and Sports of the CR, Center of Biocatalysis and Biotransformation

• MSM0021622412, plan (intention): Name: Interakce mezi chemickými látkami, prostředím a biologickými systémy a jejich důsledky na globální, regionální a lokální úrovni (INCHEMBIOL) (Acronym: INCHEMBIOL)

Investor: Ministry of Education, Youth and Sports of the CR, Interactions among the chemicals, environment and biological systems and their consequences on the global, regional and local scales (INCHEMBIOL)