a 2011

The evolution and meaning of DNA base composition in monocots

ŠMARDA, Petr and Petr BUREŠ

Basic information

Original name

The evolution and meaning of DNA base composition in monocots

Name in Czech

Evoluce a význam složení DNA bazí u jednoděložných

Authors

ŠMARDA, Petr (203 Czech Republic, guarantor, belonging to the institution) and Petr BUREŠ (203 Czech Republic, belonging to the institution)

Edition

6. konference Analytická cytometrie, 2011

Other information

Language

English

Type of outcome

Konferenční abstrakt

Field of Study

10600 1.6 Biological sciences

Country of publisher

Czech Republic

Confidentiality degree

není předmětem státního či obchodního tajemství

RIV identification code

RIV/00216224:14310/11:00050068

Organization unit

Faculty of Science

ISBN

978-80-260-0676-3

Keywords (in Czech)

GC content; plant DNA base composition; genome evolution; flow cytometry

Keywords in English

GC obsah; DNA kompozice rostlinných genomů; evoluce genomu; průtoková cytometrie

Tags

International impact
Změněno: 18/10/2011 12:02, Mgr. Petr Šmarda, Ph.D.

Abstract

V originále

Research on the base composition has long tradition in microbial research where base composition represents a significant classification criterion and similarly to genome size it represents an important predictor of species ecology. A similar research on the magnitude and dynamics of genome evolution in respect of base composition (DNA quality) is widely lacking in plants. Here we present results of measurements of GC content and genome sizes across a nearly complete phylogenetical family representation of monocots. This model group shows an extreme genome diversity comprising both species with absolutely lowest (Cyperaceae clade) and highest (Poaceae, Xyridaceae+Eriocaulaceae clade) GC contents known to date. The results of our pilot analyses using phylogenetical comparative methods are present which test how speed of GC content and genome size evolution may vary across various lineages of monocots and climatic regions, and to what extent the speed of genome evolution may be determined or reflected with specific life strategies and species ecology.

Links

GAP506/11/0890, research and development project
Name: Evoluce kompozice DNA bazí u vyšších rostlin (Acronym: GCobsah)
Investor: Czech Science Foundation
GP206/08/P222, research and development project
Name: Evoluce GC obsahu a genomu trav
Investor: Czech Science Foundation, GC content and genome evolution of grasses
LC06073, research and development project
Name: Centrum pro výzkum biodiverzity
Investor: Ministry of Education, Youth and Sports of the CR, Biodiversity Research Center
MSM0021622416, plan (intention)
Name: Diverzita biotických společenstev a populací: kauzální analýza variability v prostoru a čase
Investor: Ministry of Education, Youth and Sports of the CR, Diversity of Biotic Communities and Populations: Causal Analysis of variation in space and time
Displayed: 19/10/2024 17:19