Nucleosome Positioning Pattern Derived from Oligonucleotide Compositions of Genomic Sequences

RAPOPORT, Alexandra E., Zakharia M. FRENKEL and Eduard TRIFONOV. Nucleosome Positioning Pattern Derived from Oligonucleotide Compositions of Genomic Sequences. Journal of Biomolecular Structure & Dynamics. Adenine Press, vol. 28, No 4, p. 567-574. ISSN 0739-1102. 2011.

Basic information

• Original name: Nucleosome Positioning Pattern Derived from Oligonucleotide Compositions of Genomic Sequences
• Authors: RAPOPORT, Alexandra E. (376 Israel), Zakharia M. FRENKEL (376 Israel) and Eduard TRIFONOV (376 Israel, guarantor, belonging to the institution).
• Edition: Journal of Biomolecular Structure & Dynamics, Adenine Press, 2011, 0739-1102.

Other information

• Original language: English
• Type of outcome: Article in a journal
• Field of Study: Genetics and molecular biology
• Country of publisher: United States of America
• Confidentiality degree: is not subject to a state or trade secret
• Impact factor: Impact factor: 4.986 in 2010
• RIV identification code: RIV/00216224:14740/11:00054892
• Organization unit: Central European Institute of Technology
• UT WoS: 000286482400010
• Keywords in English: IN-VITRO; 10-11 BP; DNA; PERIODICITIES; CHROMATIN; ELEGANS; PROTEIN; RECOGNITION; PERSPECTIVE; LANDSCAPE
• Tags: ok, rivok
• Tags: International impact, Reviewed

Abstract

Availability of nucleosome positioning pattern(s) is crucial for chromatin studies. In this work we attempted the reconstruction of the bendability patterns for 13 genomes by a novel approach-extension of highest frequency trinucleotides.

Links

• MSM0021622415, plan (intention): Name: Molekulární podstata buněčných a tkáňových regulací

Investor: Ministry of Education, Youth and Sports of the CR, Molecular basis of cell and tissue regulations