BLAŽEK, Dalibor, Jiří KOHOUTEK, Koen BARTHOLOMEEUSEN, Eric JOHANSEN, Petra HULINKOVÁ, Zeping P. LUO, Peter CIMERMANCIC, Jernej ULE and Matija B. PETERLIN. The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes. Genes & Development. Spojené státy americké: Cold Spring Harbor Laboratory Press, 2011, vol. 25, No 20, p. 2158-2172. ISSN 0890-9369. Available from: https://dx.doi.org/10.1101/gad.16962311.
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Basic information
Original name The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes
Name in Czech Cyklin K/Cdk12 komplex udrzuje genomovou stabilitu regulaci exprese DNA damage response genu
Authors BLAŽEK, Dalibor (203 Czech Republic, guarantor, belonging to the institution), Jiří KOHOUTEK (203 Czech Republic), Koen BARTHOLOMEEUSEN (840 United States of America), Eric JOHANSEN (840 United States of America), Petra HULINKOVÁ (203 Czech Republic), Zeping P. LUO (840 United States of America), Peter CIMERMANCIC (840 United States of America), Jernej ULE (826 United Kingdom of Great Britain and Northern Ireland) and Matija B. PETERLIN (840 United States of America).
Edition Genes & Development, Spojené státy americké, Cold Spring Harbor Laboratory Press, 2011, 0890-9369.
Other information
Original language English
Type of outcome Article in a journal
Field of Study Genetics and molecular biology
Country of publisher United States of America
Confidentiality degree is not subject to a state or trade secret
WWW URL
Impact factor Impact factor: 11.659
RIV identification code RIV/00216224:14740/11:00050490
Organization unit Central European Institute of Technology
Doi http://dx.doi.org/10.1101/gad.16962311
UT WoS 000296496100005
Keywords in English P-TEFb; Cdk12; CycK; Cdk9; DNA damage; transcription
Tags ok, rivok
Tags International impact, Reviewed
Changed by Changed by: Olga Křížová, učo 56639. Changed: 31/7/2013 13:09.
Abstract
Various cyclin-dependent kinase (Cdk) complexes have been implicated in the regulation of transcription. In this study, we identified a 70-kDa Cyclin K (CycK) that binds Cdk12 and Cdk13 to form two different complexes (CycK/Cdk12 or CycK/Cdk13) in human cells. The CycK/Cdk12 complex regulates phosphorylation of Ser2 in the C-terminal domain of RNA polymerase II and expression of a small subset of human genes, as revealed in expression microarrays. Depletion of CycK/Cdk12 results in decreased expression of predominantly long genes with high numbers of exons. The most prominent group of down-regulated genes are the DNA damage response genes, including the critical regulators of genomic stability: BRCA1 (breast and ovarian cancer type 1 susceptibility protein 1), ATR (ataxia telangiectasia and Rad3-related), FANCI, and FANCD2. We show that CycK/Cdk12, rather than CycK/Cdk13, is necessary for their expression. Nuclear run-on assays and chromatin immunoprecipitations with RNA polymerase II on the BRCA1 and FANCI genes suggest a transcriptional defect in the absence of CycK/Cdk12. Consistent with these findings, cells without CycK/Cdk12 induce spontaneous DNA damage and are sensitive to a variety of DNA damage agents. We conclude that through regulation of expression of DNA damage response genes, CycK/Cdk12 protects cells from genomic instability. The essential role of CycK for organisms in vivo is further supported by the result that genetic inactivation of CycK in mice causes early embryonic lethality.
Abstract (in Czech)
Různé cyklin-dependentní kinázove (CDK) komplexy se podílí na regulaci transkripce. V této studii jsme zjistili 70-kDa cyklin K (CycK), který se váže Cdk12 a Cdk13 tvořii dva různé komplexy (CycK/Cdk12 nebo CycK/Cdk13) v lidských buňkách. Komplex CycK/Cdk12 reguluje fosforylaci Ser2 v C-terminální doméne RNA polymerázy II a expresi pouze male částí lidských genů, jak se ukázaly expresni microarrays. Deplece CycK/Cdk12 vede ke snížení exprese prevazne dlouhych genu s vysokym poctem exonu.Nejvýznamnější skupinou down-reguloványch genu jsou geny DNA damage, které zahrnují kritické regulátory genomové stability: BRCA1 , ATR , FANCI a FANCD2. Ukazuje se, že CycK/Cdk12, spíše než CycK/Cdk13, jsou nutné pro jejich expresy. Chromatinove immunoprecipitace s RNA polymerázy II v BRCA1 a FANCI genech naznačují transcripcni defekt v nepřítomnosti CycK/Cdk12. V souladu s těmito závěry, buňky bez CycK/Cdk12 vyvolávaji spontánního poškození DNA a jsou citlivé na různé agenty DNA poškození. Došli jsme k závěru, že prostřednictvím regulace exprese genů DNA damage, CycK/Cdk12 chrání buňky před genomickou nestabilitou. Zásadní role CycK pro organismy in vivo je dále podporován tím výsledkem, že geneticka inaktivace CycK u myší způsobuje časnou embryonální úmrtnost.
Links
GAP305/11/1564, research and development projectName: Nová izoforma cyklinu K je partnerem kinázy cdk12 regulující transkripci a alternativní sestřih u eukaryot
Investor: Czech Science Foundation
SRGA454, interní kód MUName: Regulace a funkce P-TEFb komplexů (Acronym: P-TEFb)
Investor: South-Moravian Region, Incoming grants
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