Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family
Proteins

J 2012

Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins

GUÉRINEAU, Marc, Zdeněk KŘÍŽ, Lucie KOZÁKOVÁ, Kateřina BEDNÁŘOVÁ, Pavel JANOŠ et. al.

Basic information

Original name

Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins

Name in Czech

Analýza Nse3/MAGE-vazebné domény v rodině proteinů Nse4/EID

Authors

GUÉRINEAU, Marc (250 France, belonging to the institution), Zdeněk KŘÍŽ (203 Czech Republic, belonging to the institution), Lucie KOZÁKOVÁ (203 Czech Republic, belonging to the institution), Kateřina BEDNÁŘOVÁ (203 Czech Republic, belonging to the institution), Pavel JANOŠ (203 Czech Republic, belonging to the institution) and Jan PALEČEK (203 Czech Republic, guarantor, belonging to the institution)

Edition

PLoS One, San Francisco, Public Library of Science, 2012, 1932-6203

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10600 1.6 Biological sciences

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

References:

URL

Impact factor

Impact factor: 3.730

RIV identification code

RIV/00216224:14740/12:00057090

Organization unit

Central European Institute of Technology

DOI

http://dx.doi.org/10.1371/journal.pone.0035813

UT WoS

000305339200115

Keywords (in Czech)

podjednotky komplexu SMC5-6; Nse4/EID; Nse3/MAGE/necdin; protein-protein docking; protein co-evoluce

Keywords in English

SMC5-6 complex subunits; Nse4/EID; Nse3/MAGE/necdin; protein-protein docking; protein co-evolution

Abstract

V originále

Background: The Nse1, Nse3 and Nse4 proteins form a tight sub-complex of the large SMC5-6 protein complex. hNSE3/MAGEG1, the mammalian ortholog of Nse3, is the founding member of the MAGE (melanoma-associated antigen) protein family and the Nse4 kleisin subunit is related to the EID (E1A-like inhibitor of differentiation) family of proteins. We have recently shown that human MAGE proteins can interact with NSE4/EID proteins through their characteristic conserved hydrophobic pocket. Methodology/Principal Findings: Using mutagenesis and protein-protein interaction analyses, we have identified a new Nse3/MAGE-binding domain (NMBD) of the Nse4/EID proteins. This short domain is located next to the Nse4 N-terminal kleisin motif and is conserved in all NSE4/EID proteins. The central amino acid residues of the human NSE4b/EID3 domain were essential for its binding to hNSE3/MAGEG1 in yeast two-hybrid assays suggesting they form the core of the binding domain. PEPSCAN ELISA measurements of the MAGEC2 binding affinity to EID2 mutant peptides showed that similar core residues contribute to the EID2-MAGEC2 interaction. In addition, the N-terminal extension of the EID2 binding domain took part in the EID2-MAGEC2 interaction. Finally, docking and molecular dynamic simulations enabled us to generate a structure model for EID2-MAGEC2. Combination of our experimental data and the structure modeling showed how the core helical region of the NSE4/EID domain binds into the conserved pocket characteristic of the MAGE protein family. Conclusions/Significance. We have identified a new Nse4/EID conserved domain and characterized its binding to Nse3/MAGE proteins. The conservation and binding of the interacting surfaces suggest tight co-evolution of both Nse4/EID and Nse3/MAGE protein families.

Links

GD204/08/H054, research and development project

Name: Molekulární mechanismy proliferace a diferenciace buněk

Investor: Czech Science Foundation, Molecular mechanisms of the cell proliferation and differentiation

IAA501630902, research and development project

Name: Charakterizace MAGE proteinů: kofaktory E3 ubiquitin ligáz?

Investor: Academy of Sciences of the Czech Republic

MSM0021622415, plan (intention)

Name: Molekulární podstata buněčných a tkáňových regulací

Investor: Ministry of Education, Youth and Sports of the CR, Molecular basis of cell and tissue regulations

Citovat

GUÉRINEAU, Marc, Zdeněk KŘÍŽ, Lucie KOZÁKOVÁ, Kateřina BEDNÁŘOVÁ, Pavel JANOŠ and Jan PALEČEK. Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins. PLoS One. San Francisco: Public Library of Science, 2012, vol. 7, No 4, p. "nestránkováno", 10 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0035813.

@article{980438,
   author = {Guérineau, Marc and Kříž, Zdeněk and Kozáková, Lucie and Bednářová, Kateřina and Janoš, Pavel and Paleček, Jan},
   article_location = {San Francisco},
   article_number = {4},
   doi = {http://dx.doi.org/10.1371/journal.pone.0035813},
   keywords = {SMC5-6 complex subunits; Nse4/EID; Nse3/MAGE/necdin; protein-protein docking; protein co-evolution},
   language = {eng},
   issn = {1932-6203},
   journal = {PLoS One},
   title = {Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins},
   url = {http://www.plosone.org/article/info:doi/10.1371/journal.pone.0035813},
   volume = {7},
   year = {2012}
}

TY  - JOUR
ID  - 980438
AU  - Guérineau, Marc - Kříž, Zdeněk - Kozáková, Lucie - Bednářová, Kateřina - Janoš, Pavel - Paleček, Jan
PY  - 2012
TI  - Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins
JF  - PLoS One
VL  - 7
IS  - 4
SP  - "nestránkováno"
EP  - "nestránkováno"
PB  - Public Library of Science
SN  - 19326203
KW  - SMC5-6 complex subunits
KW  - Nse4/EID
KW  - Nse3/MAGE/necdin
KW  - protein-protein docking
KW  - protein co-evolution
UR  - http://www.plosone.org/article/info:doi/10.1371/journal.pone.0035813
L2  - http://www.plosone.org/article/info:doi/10.1371/journal.pone.0035813
N2  - Background: The Nse1, Nse3 and Nse4 proteins form a tight sub-complex of the large SMC5-6 protein complex. hNSE3/MAGEG1, the mammalian ortholog of Nse3, is the founding member of the MAGE (melanoma-associated antigen) protein family and the Nse4 kleisin subunit is related to the EID (E1A-like inhibitor of differentiation) family of proteins. We have recently shown that human MAGE proteins can interact with NSE4/EID proteins through their characteristic conserved hydrophobic pocket. Methodology/Principal Findings: Using mutagenesis and protein-protein interaction analyses, we have identified a new Nse3/MAGE-binding domain (NMBD) of the Nse4/EID proteins. This short domain is located next to the Nse4 N-terminal kleisin motif and is conserved in all NSE4/EID proteins. The central amino acid residues of the human NSE4b/EID3 domain were essential for its binding to hNSE3/MAGEG1 in yeast two-hybrid assays suggesting they form the core of the binding domain. PEPSCAN ELISA measurements of the MAGEC2 binding affinity to EID2 mutant peptides showed that similar core residues contribute to the EID2-MAGEC2 interaction. In addition, the N-terminal extension of the EID2 binding domain took part in the EID2-MAGEC2 interaction. Finally, docking and molecular dynamic simulations enabled us to generate a structure model for EID2-MAGEC2. Combination of our experimental data and the structure modeling showed how the core helical region of the NSE4/EID domain binds into the conserved pocket characteristic of the MAGE protein family. Conclusions/Significance. We have identified a new Nse4/EID conserved domain and characterized its binding to Nse3/MAGE proteins. The conservation and binding of the interacting surfaces suggest tight co-evolution of both Nse4/EID and Nse3/MAGE protein families.
ER  -

GUÉRINEAU, Marc, Zdeněk KŘÍŽ, Lucie KOZÁKOVÁ, Kateřina BEDNÁŘOVÁ, Pavel JANOŠ and Jan PALEČEK. Analysis of the Nse3/MAGE-binding Domain of the Nse4/EID Family Proteins. \textit{PLoS One}. San Francisco: Public Library of Science, 2012, vol.~7, No~4, p.~''nestránkováno'', 10 pp. ISSN~1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0035813.

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