KARAS, Pavel, David SVOBODA and Pavel ZEMČÍK. GPU Optimization of Convolution for Large 3-D Real Images. In Blanc-Talon, Jacques and Philips, Wilfried and Popescu, Dan and Scheunders, Paul and Zemcík, Pavel. Proceedings of the International Conference on Advanced Concepts for Intelligent Vision Systems (ACIVS’12). Neuveden: Springer Berlin / Heidelberg, 2012, p. 59-71. ISBN 978-3-642-33139-8. Available from: https://dx.doi.org/10.1007/978-3-642-33140-4_6.
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Basic information
Original name GPU Optimization of Convolution for Large 3-D Real Images
Authors KARAS, Pavel (203 Czech Republic, guarantor, belonging to the institution), David SVOBODA (203 Czech Republic, belonging to the institution) and Pavel ZEMČÍK (203 Czech Republic).
Edition Neuveden, Proceedings of the International Conference on Advanced Concepts for Intelligent Vision Systems (ACIVS’12), p. 59-71, 13 pp. 2012.
Publisher Springer Berlin / Heidelberg
Other information
Original language English
Type of outcome Proceedings paper
Field of Study 10201 Computer sciences, information science, bioinformatics
Country of publisher Germany
Confidentiality degree is not subject to a state or trade secret
Publication form printed version "print"
WWW URL
Impact factor Impact factor: 0.402 in 2005
RIV identification code RIV/00216224:14330/12:00057444
Organization unit Faculty of Informatics
ISBN 978-3-642-33139-8
ISSN 0302-9743
Doi http://dx.doi.org/10.1007/978-3-642-33140-4_6
Keywords in English gpu; convolution; 3-D; image processing
Tags cbia-web
Tags International impact, Reviewed
Changed by Changed by: RNDr. Pavel Karas, Ph.D., učo 106808. Changed: 2/4/2013 15:36.
Abstract
In this paper, we propose a method for computing convolution of large 3-D images with respect to real signals. The convolution is performed in a frequency domain using a convolution theorem. Due to properties of real signals, the algorithm can be optimized so that both time and the memory consumption are halved when compared to complex signals of the same size. Convolution is decomposed in a frequency domain using the decimation in frequency (DIF) algorithm. The algorithm is accelerated on a graphics hardware by means of the CUDA parallel computing model, achieving up to 10x speedup with a single GPU over an optimized implementation on a quad-core CPU.
Links
GBP302/12/G157, research and development projectName: Dynamika a organizace chromosomů během buněčného cyklu a při diferenciaci v normě a patologii
Investor: Czech Science Foundation
MUNI/A/0914/2009, interní kód MUName: Rozsáhlé výpočetní systémy: modely, aplikace a verifikace (Acronym: SV-FI MAV)
Investor: Masaryk University, Category A
2B06052, research and development projectName: Vytipování markerů, screening a časná diagnostika nádorových onemocnění pomocí vysoce automatizovaného zpracování multidimenzionálních biomedicínských obrazů (Acronym: Biomarker)
Investor: Ministry of Education, Youth and Sports of the CR, Determination of markers, screening and early diagnostics of cancer diseases using highly automated processing of multidimensional biomedical images
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