J 2012

Biocompatible Xanthine-Quadruplex Scaffold for Ion-Transporting DNA Channels

NOVOTNÝ, Jan, Petr KULHÁNEK and Radek MAREK

Basic information

Original name

Biocompatible Xanthine-Quadruplex Scaffold for Ion-Transporting DNA Channels

Authors

NOVOTNÝ, Jan (203 Czech Republic, belonging to the institution), Petr KULHÁNEK (203 Czech Republic, belonging to the institution) and Radek MAREK (203 Czech Republic, guarantor, belonging to the institution)

Edition

The Journal of Physical Chemistry Letters, Washington, American Chemical Society, 2012, 1948-7185

Other information

Language

English

Type of outcome

Článek v odborném periodiku

Field of Study

10403 Physical chemistry

Country of publisher

United States of America

Confidentiality degree

není předmětem státního či obchodního tajemství

Impact factor

Impact factor: 6.585

RIV identification code

RIV/00216224:14740/12:00060331

Organization unit

Central European Institute of Technology

UT WoS

000306251900011

Keywords (in Czech)

molekulová dynamika; guanin; potenciál střední síly; přenos iontu; volná energie

Keywords in English

molecular dynamics; guanine; adaptive biasing force; ion transport; free-energy

Tags

Tags

International impact, Reviewed
Změněno: 14/11/2017 08:32, prof. RNDr. Radek Marek, Ph.D.

Abstract

V originále

Molecular dynamics simulations and adaptive biasing force analysis of the quadruplex DNA dynamics in an explicit solvent reveal fundamentally different mechanisms of Na+ transport in xanthine- and guanine-based DNA systems. The barrier to the transport of K+ through the xanthine-based quadruplex is significantly lower than those reported for the guanine-based analogs.

Links

ED1.1.00/02.0068, research and development project
Name: CEITEC - central european institute of technology

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