Publication Records

HOŠKOVÁ, Kateřina, Šárka FAJTLOVÁ, Pavel PLEVKA, Michal MIKL, Milan EŠNER, Radka SVOBODOVÁ and Boris TICHÝ. CF Day 2023. 2024.

FAJTLOVÁ, Šárka, Eliška JANÍČKOVÁ, Barbora TRUKSOVÁ, Karolína ŠUPEJOVÁ, Jan PŘIBYL, Radka OBOŘILOVÁ and Šimon KLIMOVIČ. Multimodal Microscopy Workshop: Probing the Triad of Structure, Mechanics, and Chemistry in Biological Systems 2024. 2024.

HOUSER, Josef and Eliška JANÍČKOVÁ. Biophysical Screening Workshop & Dianthus hands-on. 2023.

TICHÝ, Boris, Jitka ŠTENCLOVÁ, MIroslav HAMAN and Barbora TRUKSOVÁ. Business Research Forum 2023. 2023.

HOUSER, Josef, Michaela WIMMEROVÁ and Kristýna HROMÁDKOVÁ. CalScreener Workshop: Calorimetric instrument to measure the metabolic response in biological systems. 2023.

HOUSER, Josef and Kateřina HOŠKOVÁ. CEITEC: project-based financing of core facilities. In 2023 Core Technologies for Life Sciences. 2023.

PŘIBYL, Jan and Kristýna HROMÁDKOVÁ. Core Facility Nanobiotechnology: Where we are and where to go next…. Brno. 2023.

PŘIBYL, Jan and Eliška JANÍČKOVÁ. Cytoplasmic biopsies for the temporal profiling of single cells by Fluidic Force Microscopy. 2023.

FOJTOVÁ, Lucie, Šárka FAJTLOVÁ and Jiří NOVÁČEK. Dny elektronové mikroskopie 2023 (Days of Electron Microscopy 2023). 2023.

MIKL, Michal and Eliška JANÍČKOVÁ. Educational course: Neuroimaging 2023. 2023.

VAŇÁČOVÁ, Štěpánka and Šárka FAJTLOVÁ. EMBO workshop - Eukaryotic RNA turnover and viral biology. 2023.

PLEVKA, Pavel, Eliška HANDLÍŘOVÁ and Eliška JANÍČKOVÁ. Exkurze studujících z Gymnázia Škrobárova, Košice (Guided tour of students from high School Škrobárova, Košice). 2023.

EŠNER, Milan and Eliška JANÍČKOVÁ. Fundamentals of Light Microscopy 2023. 2023.

EŠNER, Milan, Vladimír ULMAN, Nils NORLIN, Ivana SEKANINOVÁ and Eliška JANÍČKOVÁ. ImgLib2 and BigDataViewer Hackathon Brno. 2023.

NOVÁČEK, Jiří and Barbora TRUKSOVÁ. Instruct-ERIC Best Practices in CryoEM Workshop. 2023.

MARTÍNKOVÁ, Radka and Šárka FAJTLOVÁ. JIC 120 sekund: Digitalizace ve výrobě s využitím umělé inteligence (JIC 120 seconds: Digitization in production using artificial intelligence). 2023.

HOUSER, Josef and Kristýna HROMÁDKOVÁ. Methods for Characterization of Biomolecular Interactions. 2023.

PLEVKA, Pavel, Barbora TRUKSOVÁ and Kristýna HOŘAVOVÁ. Mjuni exkurze (Mjuni guided tour). 2023.

PŘIBYL, Jan and Barbora TRUKSOVÁ. Nanosurf DriveAFM Workshop. 2023.

HOUSER, Josef and Barbora TRUKSOVÁ. Novel Drug Discovery & Delivery systems: Malvern Panalytical Biophysical Characterisation Seminar. 2023.

O'CONNELL, Mary Anne, Michaela MUSILOVÁ and Barbora TRUKSOVÁ. RNA PhD Conference 2023. 2023.

LUKAVSKY, Peter, Dalibor BLAŽEK, Vojtěch BYSTRÝ, Anna HELÁNOVÁ and Barbora TRUKSOVÁ. RNA Summer School 2023. 2023.

HANDLÍŘOVÁ, Eliška, Barbora TRUKSOVÁ and Šárka FAJTLOVÁ. Strategické řízení vědy na národní a institucionální úrovni/česko-slovenská konference Alliance4Life (Strategic management of science at the national and institutional level/Czech-Slovak conference Alliance4Life). 2023.

PŘIBYL, Jan and Eliška JANÍČKOVÁ. Summer workshop on BioAFM Microscopy 2023. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Differential scanning fluorimetry demo. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Mass photometry workshop: Demonstration of instrument for molecular size analysis. 2023.

MLADENOVIĆ, Dušan, Michal JIRÁSEK, Tomáš ONDRÁČEK, Zuzana OPATRNÁ and Radmila ŠTANGOVÁ. The influence of social conformity on mask-wearing behavior during the COVID-19 pandemic. Heliyon. Cambridge: CELL PRESS, 2023, vol. 9, No 3, p. 1-11. ISSN 2405-8440. Available from: https://dx.doi.org/10.1016/j.heliyon.2023.e14496.

OPATRNÁ, Zuzana and Jakub PROCHÁZKA. Work-life balance policies and organizational financial performance: a scoping review. Employee Relations. Bingley: Emerald Publishing ltd, 2023, vol. 45, No 7, p. 103-120. ISSN 0142-5455. Available from: https://dx.doi.org/10.1108/ER-09-2022-0417.

MIKL, Michal and Kristýna HROMÁDKOVÁ. Workshop on Brain Microstates. 2023.

NOVÁČEK, Jiří and Barbora TRUKSOVÁ. 3rd CEITEC Symposium on Recent Advances in Cryo-EM. 2023.

POKORNÁ, Pavlína, Miroslav KREPL, Sébastien CAMPAGNE and Jiří ŠPONER. Conformational Heterogeneity of RNA Stem-Loop Hairpins Bound to FUS-RNA Recognition Motif with Disordered RGG Tail Revealed by Unbiased Molecular Dynamics Simulations. Journal of Physical Chemistry B. American Chemical Society, 2022, vol. 126, No 45, p. 9207-9221. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.2c06168.

NOVOTNÁ, Markéta and Lucie KOŠŤÁLOVÁ. Důsledky environmentálních postojů pro volbu udržitelného způsobu dopravy (Consequences of Environmental Attitudes for Sustainable Transport Mode Choice). Online. In Klímová, V., Žítek, V. (eds.). XXV. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. 1st ed. Brno: Masarykova univerzita, 2022, p. 360-366. ISBN 978-80-280-0068-4. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P280-0068-2022-44.

FAJTLOVÁ, Šárka, Michal MIKL, Jan PŘIBYL, Pavel PLEVKA, Šárka POSPÍŠILOVÁ and Jiří NOVÁČEK. Noc vědců: Všemi smysly (Researchers' Night 2022 at CEITEC MU). 2022.

VARADI, Mihaly, Stephen ANYANGO, Sri Devan APPASAMY, David ARMSTRONG, Marcus BAGE, John BERRISFORD, Preeti CHOUDHARY, Damian BERTONI, Mandar DESHPANDE, Grisell Diaz LEINES, Joseph ELLAWAY, Genevieve EVANS, Romana GÁBOROVÁ, Deepti GUPTA, Aleksandras GUTMANAS, Deborah HARRUS, Gerard J KLEYWEGT, Weslley Morellato BUENO, Nurul NADZIRIN, Sreenath NAIR, Lukas PRAVDA, Marcelo Querino Lima AFONSO, David SEHNAL, Ahsan TANWEER, James TOLCHARD, Charlotte ABRAMS, Roisin DUNLOP and Sameer VELANKAR. PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education. Protein Science. Wiley, 2022, vol. 31, No 10, p. 1-10. ISSN 0961-8368. Available from: https://dx.doi.org/10.1002/pro.4439.

MRÁZIKOVÁ, Klaudia, Pascal AUFFINGER, Holger KRUSE, Vojtěch MLÝNSKÝ and Jiří ŠPONER. Quantum chemistry reveals AMBER force field shortcomings for anion…π contacts in nucleic acids. In 2nd International Conference on Noncovalent Interactions. 2022.

MRÁZIKOVÁ, Klaudia, Pascal AUFFINGER, Holger KRUSE, Vojtěch MLÝNSKÝ and Jiří ŠPONER. Quantum chemistry reveals AMBER force field shortcomings for anion…π contacts in nucleic acids. In WATOC 2020: 12th Triennial Congress of the World Association of Theoretical and Computational Chemists. 2022.

KREPL, Miroslav, Pavlína POKORNÁ, Vojtěch MLÝNSKÝ, Petr STADLBAUER and Jiří ŠPONER. Spontaneous binding of single-stranded RNAs to RRM proteins visualized by unbiased atomistic simulations with a rescaled RNA force field. Nucleic Acids Research. Oxford University Press, 2022, vol. 50, No 21, p. 12480-12496. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac1106.

DOSEDĚLOVÁ, Věra, Petra ITTERHEIMOVÁ and Petr KUBÁŇ. Analysis of bile acids in human biological samples by microcolumn separation techniques: A review. Electrophoresis. Hoboken: Wiley, 2021, vol. 42, 1-2, p. 68-85. ISSN 0173-0835. Available from: https://dx.doi.org/10.1002/elps.202000139.

ŠTEFÁNIKOVÁ, Marianna, Petr KUBÁŇ, Zita CHOVANCOVÁ, Jana SKŘIČKOVÁ and Martina DOUBKOVÁ. Cytokiny v kondenzátu vydechovaného vzduchu u asthma bronchiale a idopatické plicní fibrózy. Studia pneumologica et phthiseologica. Trios s.r.o., 2021, vol. 81, No 2, p. 78-87. ISSN 1213-810X.

FAJTLOVÁ, Šárka and Jiří NOVÁČEK. Dny elektronové mikroskopie (Days of Electron Microscopy). 2021.

ROY, Rajarshi, David NEČAS and Lenka ZAJÍČKOVÁ. Evidence of flexoelectricity in graphene nanobubbles created by tip induced electric field. Carbon. Elsevier, 2021, vol. 179, No 1, p. 677-682. ISSN 0008-6223. Available from: https://dx.doi.org/10.1016/j.carbon.2021.04.086.

FAJTLOVÁ, Šárka, Ivan REKTOR, Michal ŠMÍDA and Štěpánka VAŇÁČOVÁ. Open Week. 2021.

ZHANG, Zhengyue, J. VOGELE, Klaudia MRÁZIKOVÁ, H. KRUSE, X.H. CANG, J. WOHNERT, M. KREPL and Jiří ŠPONER. Phosphorothioate Substitutions in RNA Structure Studied by Molecular Dynamics Simulations, QM/MM Calculations, and NMR Experiments. Journal of Physical Chemistry B. Washington, D.C.: American Chemical Society, 2021, vol. 125, No 3, p. 825-840. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.0c10192.

WOLFOVÁ, Kateřina, Lenka STAŇOVÁ and Zuzana SLOVÁČKOVÁ. Pracovní angažovanost, resilience, work-life balance a syndrom vyhoření u populace slovenských zdravotních sester (Work engagement, resilience, work-life balance and burnout in a sample of hospital nurses). In Kontexty současné psychologie: Psychologické aspekty pomáhání 2021. 2021.

POKORNÁ, Pavlína, Miroslav KREPL and Jiří ŠPONER. Residues flanking the ARK^me3T/S motif allow binding of diverse targets to the HP1 chromodomain: Insights from molecular dynamics simulations. Biochimica et Biophysica Acta - General Subjects. Amsterdam: Elsevier B.V., 2021, vol. 1865, No 1, p. 1-12. ISSN 0304-4165. Available from: https://dx.doi.org/10.1016/j.bbagen.2020.129771.

MRÁZIKOVÁ, Klaudia, Pascal AUFFINGER, Jiří ŠPONER, Vojtěch MLÝNSKÝ and Holger KRUSE. Revealing Short-Range Imbalances in AMBER Force Field for Lone-pair…π Contacts. In RNA 2021. 2021.

MLADENOVIĆ, Dušan, Roberto BRUNI and Prateek KALIA. Social and Demographic Predictors of Consumers’ Word of Mouth Engagement in Czechia. Journal of International Consumer Marketing. Philadelphia, USA: Taylor & Francis, 2021, vol. 33, No 4, p. 418-433. ISSN 0896-1530. Available from: https://dx.doi.org/10.1080/08961530.2020.1800547.

RRUSTEMI, Visar, Dušan MLADENOVIĆ and Gezim JUSUFI. Social Marketing Challenges in Western Balkans: Evidence From Kosovo. Medicine, Law & Society. Maribor (Slovenia): University of Maribor Press, 2021, vol. 14, No 1, p. 153-172. ISSN 2463-7955. Available from: https://dx.doi.org/10.18690/mls.4.1.153-172.2021.

RRUSTEMI, Visar, Egzona HASANI, Gezim JUSUFI and Dušan MLADENOVIĆ. Social Media in Use: A Uses and Gratifications Approach. Management : Journal of Contemporary Management Issues. Split, Croatia: Faculty of Economics, University of Split, 2021, vol. 26, No 1, p. 201-217. ISSN 1331-0194. Available from: https://dx.doi.org/10.30924/mjcmi.26.1.12.

WOLFOVÁ, Kateřina and Zuzana SLOVÁČKOVÁ. Specifický výzkum: Angažovanost (Specific research: Engagement). 2021.

WOLFOVÁ, Kateřina, David LACKO and Zuzana SLOVÁČKOVÁ. Vybrané psychologické aspekty pracovní angažovanosti u středoškolských učitelů (Specific psychological aspects of work engagement among secondary school teachers). Online. In Blatný Marek; Květon Petr; Jelínek Martin. Sociální procesy a osobnost 2020 Sborník příspěvků. Brno: Masarykova univerzita, 2021, p. 221 - 227. ISBN 978-80-210-9912-8.

OČENÁŠEK, Vojtěch, Kateřina WOLFOVÁ and Zuzana SLOVÁČKOVÁ. Work engagement of primary school teachers in the context of self-determination theory. Online. In Gómez Chova, L.; López Martínez, A.; Candel Torres I. ICERI2021 Proceedings. Seville: IATED Academy, 2021, p. 3591-3599. ISBN 978-84-09-34549-6. Available from: https://dx.doi.org/10.21125/iceri.2021.0866.

WOLFOVÁ, Kateřina. Work engagement of primary school teachers in the context of self-determination theory. In 14th annual International Conference of Education, Research and Innovation. 2021. ISBN 978-84-09-34549-6.

SLOVÁČKOVÁ, Zuzana, Marie MATĚJÍČKOVÁ and Kateřina WOLFOVÁ. Změny v subjektivním vnímání vybraných psychologických aspektů práce a zdraví v důsledku pandemie COVID-19 u zaměstnanců v korporátním prostředí (Changes in the subjective perception of selected psychological aspects of work and health in corporate employees in the context of the COVID-19 pandemic). In Kontexty současné psychologie: Psychologické aspekty pomáhání 2021. 2021.

MALÁ, Miriam, Petra ITTERHEIMOVÁ, Lukáš HOMOLA, Jana VINOHRADSKÁ and Petr KUBÁŇ. 3D Printed Skin-Wash Sampler for Sweat Sampling in Cystic Fibrosis Diagnosis Using Capillary Electrophoretic Ion Ratio Analysis. Separations. Basel: MDPI, 2021, vol. 8, No 12, p. 1-10. ISSN 2297-8739. Available from: https://dx.doi.org/10.3390/separations8120234.

FAJTLOVÁ, Šárka. Exkurze gymnázia Slovanské náměstí (Excursion of the Slovanské náměstí high school). 2020.

SÝKOROVÁ, Petra, Jitka NOVOTNÁ, Gabriel DEMO, Guillaume POMPIDOR, Eva DUBSKÁ, Jan KOMÁREK, Eva FUJDIAROVÁ, Josef HOUSER, Lucia HÁRONÍKOVÁ, Annabelle VARROT, Nadya SHILOVA, Anne IMBERTY, Nicolai BOVIN, Martina POKORNÁ and Michaela WIMMEROVÁ. Characterization of novel lectins from Burkholderia pseudomallei and Chromobacterium violaceum with seven-bladed beta-propeller fold. International journal of biological macromolecules. Amsterdam: Elsevier Science BV, 2020, vol. 152, JUN, p. 1113-1124. ISSN 0141-8130. Available from: https://dx.doi.org/10.1016/j.ijbiomac.2019.10.200.

MLADENOVIĆ, Dušan and Anida KRAJINA. Knowledge Sharing on Social media: State of the Art in 2018. Journal of Business Economics and Management. Vilnius: VGTU Press, 2020, vol. 21, No 1, p. 44-63. ISSN 1611-1699. Available from: https://dx.doi.org/10.3846/jbem.2019.11407.

FAJTLOVÁ, Šárka. Noc vědců 2020 (Researchers' Night 2020). 2020.

TÓTHOVÁ, Lenka, Jitka SEDLÁČKOVÁ and Eva BARNOVÁ. Online English for International Mobilities: A course for students. In The LangSkills project closing conference. 2020.

ARMSTRONG, David R., John M. BERRISFORD, Matthew J. CONROY, Aleksandras GUTMANAS, Stephen ANYANGO, Preeti CHOUDHARY, Alice R. CLARK, Jose M. DANA, Mandar DESHPANDE, Roisin DUNLOP, Paul GANE, Romana GÁBOROVÁ, Deepti GUPTA, Pauline HASLAM, Jaroslav KOČA, Lora MAK, Saqib MIR, Abhik MUKHOPADHYAY, Nurul NADZIRIN, Sreenath NAIR, Typhaine PAYSAN-LAFOSSE, Lukas PRAVDA, David SEHNAL, Osman SALIH, Oliver SMART, James TOLCHARD, Mihaly VARADI, Radka SVOBODOVÁ, Hossam ZAKI, Gerard J. KLEYWEGT and Sameer VELANKAR. PDBe: improved findability of macromolecular structure data in the PDB. Nucleic acids research. Oxford: Oxford University Press, 2020, vol. 48, D1, p. "D335"-"D343", 9 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz990.

TÓTHOVÁ, Lenka, Jitka SEDLÁČKOVÁ and Eva BARNOVÁ. Seminář pro učitele angličtiny pracující s neslyšícími a nedoslýchavými studenty (Seminar for English teachers working with Deaf, deaf and hard of hearing students). 2020.

BARNOVÁ, Eva, Lukáš MÁSILKO, Iva OULEHLOVÁ, Ilja RAJDOVÁ and Miroslav ZÍTKO. Studenti se specifickými nároky ve výuce (Students with Special Needs in Classes). 1. vyd. Brno: Masarykova univerzita, 2020. Elportál. ISSN 1802-128X.

BOUCHAL, Pavel, Olga T. SCHUBERT, Jakub FAKTOR, Lenka ČÁPKOVÁ, Hana IMRICHOVÁ, Karolína ZOUFALOVÁ, Vendula PÁRALOVÁ, Roman HRSTKA, Yansheng S. LIU, Holger A. EBHARDT, Eva BUDINSKÁ, Rudolf NENUTIL and Ruedi AEBERSOLD. Breast Cancer Classification Based on Proteotypes Obtained by SWATH Mass Spectrometry. Cell Reports. CAMBRIDGE: Cell Press, 2019, vol. 28, No 3, p. "832"-"843.e7", 20 pp. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2019.06.046.

ORNEROVÁ, Kateřina. Business Research Forum 2019 - CTT MUNI. 2019.

OTOUPALÍKOVÁ, Jana. #CEITEC100 Alumni Day. 2019.

OTOUPALÍKOVÁ, Jana. #CEITEC100 Open Day. 2019.

OTOUPALÍKOVÁ, Jana. Coben Planetárium 1. přednáška ze série Vision and seeing (Coben Planetárium 1. lecture from Vision and seeing series). 2019.

OTOUPALÍKOVÁ, Jana. Coben Planetárium 2. přednáška ze série Vision and seeing (Coben Planetárium 2. lecture from Vision and seeing series). 2019.

MLADENOVIĆ, Dušan, Ishtiaq Ahmad DANISH and Anida KRAJINA. Comparing Effectiveness of Display Ads and Influencer Marketing on Pinterest. Online. In Ing. Petr Mikuš, Ph.D. Proceedings of the International Scientific Conference of Business Economics Management and Marketing 2019. Brno: Masaryk University, 2019, p. 115-123. ISBN 978-80-210-9565-6.

LUKÁŠOVÁ, Růžena and Daria KUCHAROVA. Criteria of Satisfaction with Universities from the Perspective of Czech Students: A Qualitative Research Study. Acta Universitatis Agriculturae at Silviculturae Mendelianae Brunensis. 2019, vol. 67, No 4, p. 1049-1060. ISSN 1211-8516. Available from: https://dx.doi.org/10.11118/actaun201906741049.

KOSTLÁNOVÁ, Nikola. Institucionální management (Institutional management). 2019.

KRAJINA, Anida. Interpretation of online consumer behaviour from the consumer neuroscience perspective - cross generational study. Online. 1st edition. Brno: MUNI PRESS, 2019, 192 pp. Not specified. ISBN 978-80-210-9110-8. Available from: https://dx.doi.org/10.5817/CZ.MUNI.M210-9110-2018.

KOSTLÁNOVÁ, Nikola. "Jean-Marie Lehn" French embassy scientific awards: jury. 2019.

MLADENOVIC, Dusan, Anida KRAJINA and Ivana MILOJEVIC. Motives for writing online reviews in post-vacation phase. International Journal of Culture, Tourism and Hospitality Research. United Kingdom: Emerald Publishing Limited, 2019, vol. 13, No 2, p. 244-256. ISSN 1750-6182. Available from: https://dx.doi.org/10.1108/IJCTHR-12-2018-0169.

OTOUPALÍKOVÁ, Jana. MUNI Open Day. 2019.

FOLTYNOVÁ, Pavla. Open Science na CEITEC MU a projekt ORION (Open Science at CEITEC MU and ORION project). 2019.

MLADENOVIĆ, Dušan and Anida KRAJINA. Perception of Differences between Traditional and Electronic Word of Mouth: Case of Czechia. Online. In Prakash Divakaran, Prakash Karmadkar, Ratikanta Ray. Our Heritage Journal. GRCF Dubai International Conference on “Sustainability and Innovation in Higher Education, Engineering Technology, Science, Management and Humanities”. Dubai: Our Heritage Journal, 2019, p. 120-129. ISSN 0474-9030.

KRAJINA, Anida and Dušan MLADENOVIĆ. Recall of Digital Content as Part of Consumer Response Model. Online. In Darko Dukic, Tomasz Studzieniecki, Jasmina Grzinic. 49th International Scientific Conference on Economic and Social Development. Book of Proceedings. Zagreb: Varazdin Development and Entrepreneurship Agency, Varazdin, Croatia, 2019, p. 36-46. ISSN 1849-7535.

FOLTYNOVÁ, Pavla and Kateřina ORNEROVÁ. Study on open science: The general state of the play in Open Science principles and practices at European life sciences institutes. Online. In Giuseppe Catalano, Cinzia Daraio, Martina Gregori, Henk F. Moed and Giancarlo Ruocco. 17th International Conference on Scientometrics and Informetrics, ISSI 2019 - Proceedings. Italy: International Society for Scientometrics and Informetrics, 2019, p. 2576-2577. ISBN 978-88-3381-118-5.

PROCHÁZKA, Jakub, Barbora HOUBOVÁ, Zuzana MÜHLBECKOVÁ, Stanislav JEŽEK and Martin VACULÍK. Work stress, work-related thoughts, neuroticism, detachment and their influence on well-being and performance: The diary study (Poster). In European Association of Work and Organizational Psychology Congress 2019. 2019.

ŠTĚPÁNEK, Libor, Janice DE HAAFF, Alena HRADILOVÁ, Colin KIMBRELL and David SCHÜLLER. Academic English - Akademická angličtina: Průvodce anglickým jazykem pro studenty, akademiky a vědce (Academic English). 2. aktualizované vydání. Praha: Grada Publishing, a. s., 2018, 224 pp. ISBN 978-80-271-0842-8.

ŠTĚPÁNEK, Libor. Curious, Confident and Creative: Autonomous Teachers for Autonomous Times. In The teacher’s role in development of learner autonomy - IATEFL LASIG Local Conference 2018. 2018.

BEČEV, Ondřej, Eva KOZÁKOVÁ, Lenka SAKÁLOŠOVÁ, Marie KUŘÁTKOVÁ, Robert ROMAN, Radek MAREČEK and Milan BRÁZDIL. Diminished N1/P2 Suppression after Delayed Cardiac Feedback. In The 22nd meeting of the Association for the Scientific Study of Consciousness. 2018.

ŠTĚPÁNEK, Libor. Drama Tools in Language Classes. 2018.

NOVOTNÁ, Markéta, Josef KUNC, Petr TONEV and Jiří HUSIČKA. ENTERTAINMENT INDUSTRY AS A FACTOR OF REGIONAL DEVELOPMENT: DOES THE CZECH REPUBLIC HAVE THE APPROPRIATE ASSUMPTIONS? (Entertainment industry as a factor of regional development: does the Czech Republic have the appropriate assumptions?). In Dubcova, A. GEOGRAFICKE INFORMACIE, VOL 22, PT 1. NITRA: CONSTANTINE PHILOSOPHER UNIV NITRA, 2018, p. 370-383. ISSN 1337-9453. Available from: https://dx.doi.org/10.17846/GI.2018.22.1.370-383.

JAROUR, Ester. Intro Labs Day. 2018.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Josef HOUSER, Eva DUBSKÁ, Jan KOMÁREK, Ondřej ŠULÁK and Michaela WIMMEROVÁ. Lectin RS20L from plant pathogen Ralstonia solanacearum : Stability studies and crystallization. In FEBS Open Bio. 2018. ISSN 2211-5463. Available from: https://dx.doi.org/10.1002/2211-5463.12453.

ŠTĚPÁNEK, Libor. Management of Videoconferencing Challenges and Strategies. In Štěpánek, L., Sedláčková, K., Byrne N. Videoconferencing in University Language Education. 1st ed. Brno: MUNI Press, 2018, p. 207-215. ISBN 978-80-210-9003-3. Available from: https://dx.doi.org/10.5817/CZ.MUNI.M210-9008-2018.

SZCZEPANIK, Petr, Pavel ZAHRÁDKA, Radim POLČÁK, Jakub MACEK, Ivan DAVID, Dominika GALAJDOVÁ, Johana KOTIŠOVÁ, Rudolf LEŠKA, Petr LUPAČ, Tomáš KARGER and Štěpán ŽÁDNÍK. Mapa audiovizuálního pole v České republice z hlediska digitalizace a strategie pro jednotný digitální trh (Map of the audiovisual field in the Czech Republic in terms of digitization and strategy for the digital single market). 1. vyd. Olomouc: Univerzita Palackého v Olomouci, 2018, 93 pp. ISBN 978-80-244-5450-4.

JANEČKOVÁ, Barbora. METAGENOMICS WORKSHOP. 2018.

KRAJINA, Anida and Jakub PROCHÁZKA. Motives behind voting and the perception of the motives: Paradox of voting in Bosnia and Herzegovina. Eurasian Economic Review. New York: Springer, 2018, vol. 8, No 3, p. 451-483. ISSN 1309-422X. Available from: https://dx.doi.org/10.1007/s40822-017-0087-8.

POLČÁK, Radim. Odpovědnost umělé inteligence a informační útvary bez právní subjektivity (Liability of AI and information trusts). Bulletin advokacie. Česká advokátní komora, 2018, vol. 2018, No 11, p. 21-28. ISSN 1210-6348.

ORNEROVÁ, Kateřina. ORION National Stakeholder workshop. 2018.

POLČÁK, Radim, Matěj MYŠKA, Petr HOSTAŠ, František KASL, Tereza KYSELOVSKÁ, Tomáš LECHNER, Pavel LOUTOCKÝ, Jakub MÍŠEK, Jan TOMÍŠEK, Václav STUPKA and Miroslav UŘIČAŘ. Právo informačních technologií (Information Technology Law). Praha: Wolters Kluwer, 2018, 656 pp. Právní monografie. ISBN 978-80-7598-045-8.

BECKERTOVÁ, Eliška and Markéta BOBKOVÁ. Příležitosti a bariéry spolupráce aktérů cestovního ruchu v mikroregionu Olomoucko (Opportunities and barriers to cooperation among tourism stakeholders in the micro-region of Olomoucko). In Klímová, V., Žítek, V. (eds.). XXI. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. Brno: Masarykova univerzita, 2018, p. 514-521. ISBN 978-80-210-8970-9. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P210-8970-2018-67.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Ondřej ŠULÁK, Eva FUJDIAROVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. RS20L protein from bacterium Ralstonia solanacearum : Studies of lectin activity and oligomerization. In Structural Glycoscience Summer School. 2018.

ŠTĚPÁNEK, Libor. Student Voices. In Štěpánek, L., Sedláčková, K., Byrne N. Videoconferencing in University Language Education. 1st ed. Brno: MUNI Press, 2018, p. 109-122. ISBN 978-80-210-9003-3. Available from: https://dx.doi.org/10.5817/CZ.MUNI.M210-9008-2018.

BOBKOVÁ, Markéta and Andrea HOLEŠINSKÁ. To be governed or to be guided - Destination networks from the Czech perspective. In 4th Advances in Destination Management 2018. 2018. Available from: https://dx.doi.org/10.13140/RG.2.2.33226.00965.

ŠAUER, Martin and Markéta NOVOTNÁ. Tourist Flows between Central European Metropolises (in the Context of Metropolisation Processes). Geographia Technica. Cluj University Press, 2018, vol. 13, No 2, p. 125-137. ISSN 1842-5135. Available from: https://dx.doi.org/10.21163/GT_2018.132.10.

NOVOTNÁ, Markéta and Iveta ŠULCOVÁ. Úroveň interakcí mezi aktéry v destinaci: geografická blízkost jako hnací síla? (The level of interactions among destination stakeholders: geographical proximity as a driving force?). In 8. medzinárodné geografické kolokvium. 2018. ISBN 978-80-8152-646-6.

ŠTĚPÁNEK, Libor, Kateřina SEDLÁČKOVÁ and Nick BYRNE. Videoconferencing in University Language Education. Online. 1., elektronické vyd. Brno: Masarykova univerzita, 2018, 255 pp. ISBN 978-80-210-9008-8. Available from: https://dx.doi.org/10.5817/CZ.MUNI.M210-9008-2018.

ŠTĚPÁNEK, Libor, Kateřina SEDLÁČKOVÁ and Nick BYRNE. Videoconferencing in University Language Education. 1st ed. Brno: Masarykova univerzita, 2018, 255 pp. ISBN 978-80-210-9003-3.

ŠTEFAŇÁKOVÁ, Lucia and Anida KRAJINA. What makes my wine e-shop stand out: Evidence from the online user experience research. In Carlos Costa, Manuel Au-Yong-Oliveira, Marlene Paula Castro Amorim. The Proceedings of the 13th European Conference on Innovation and Entrepreneurship ECIE 2018. UK: Academic Conferences and Publishing International Limited, 2018, p. 1038-1045, 1082 pp. ISBN 978-1-911218-97-5.

POLČÁK, Radim. Zpracování osobních údajů v justici (Personal data processing in the judiciary). Zpravodaj Jednoty českých právníků. 2018, vol. 28, No 4, p. 39-51. ISSN 2464-5982.

HOLEŠINSKÁ, Andrea and Markéta NOVOTNÁ. 9. mezinárodní kolokvium o cestovním ruchu (9th International Colloquium on Tourism). 2018.

BOBKOVÁ, Markéta. Analýza spolupráce v cestovním ruchu z pohledu síťových charakteristik (Analysis of cooperation in tourism from the perspective of network characteristics). In Klímová, V., Žítek, V. (eds.). XX. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. Brno: Masarykova univerzita, 2017, p. 660-666. ISBN 978-80-210-8587-9. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P210-8587-2017-86.

ŠTĚPÁNEK, Libor. Creative Teachers, Creative Kids: How to introduce creativity to English classrooms. In Seminar for EFL teachers (organized by Xunta de Galicia), February. 2017.

ŠTĚPÁNEK, Libor. Creative Thinking for Language Teaching. In Seminar for EFL teachers, Università del Molise, 27. 9. 2017.

ŠTĚPÁNEK, Libor. Creativity and Education: Creative Thinking for (Language) Learning. In Seminars for Erasmus students and PhD students, Università del Molise, 26. 9. 2017.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Josef HOUSER, Eva DUBSKÁ, Ondřej ŠULÁK and Michaela WIMMEROVÁ. Crystallization and stability studies of trimeric lectin RS20L from phytopathogen Ralstonia solanacearum. In XVIII. setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

KUŘÁTKOVÁ, Marie, Josef MANA, Goncalo Filipe DE CARVALHO RODRIGUES, Ondřej BEČEV, Eva KOZÁKOVÁ, Radek MAREČEK, Lenka SAKÁLOŠOVÁ, Bartosz MAJCHROWICZ, Robert ROMAN and milan BRÁZDIL. Deceptions of the Heart: The Influence of False Cardiac Feedback on Autonomic Markers of Arousal. In IX. Cracow Cognitive Science Conference. 2017.

GROCHALOVÁ, Martina, Hana KONEČNÁ, Karel STEJSKAL, David POTĚŠIL, Danuše FRIDRICHOVÁ, Eva SRBOVÁ, Kateřina ORNEROVÁ and Zbyněk ZDRÁHAL. Deep coverage of the beer proteome. Journal of Proteomics. Amsterdam: ELSEVIER SCIENCE BV, 2017, vol. 162, JUN, p. 119-124. ISSN 1874-3919. Available from: https://dx.doi.org/10.1016/j.jprot.2017.05.001.

LOUTOCKÝ, Pavel, Tomáš ABELOVSKÝ, Jakub HARAŠTA, František KASL, Alžběta KRAUSOVÁ, Tereza KYSELOVSKÁ, Jakub MÍŠEK, Matěj MYŠKA, Radim POLČÁK, Lucie STRAKOVÁ and Václav STUPKA. Dokumenty ke studiu práva informačních a komunikačních technologií. 2017.

ŠTĚPÁNEK, Libor. Drama and Theatre for Language Learning. In Seminar for EFL teachers (organized by Xunta de Galicia), October. 2017.

BEČEV, Ondřej, Eva KOZÁKOVÁ, Lenka SAKÁLOŠOVÁ, Josef MANA, Marie KUŘÁTKOVÁ, Radek MAREČEK, Bartosz MAJCHROWICZ, Robert ROMAN and Milan BRÁZDIL. Effect of Interoceptive Feedback Manipulation on Sense of Agency. In Me & I. Conceptual and empirical perspectives on the self. 2017.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA and Pavel LOUTOCKÝ. European ICT Law 2017: Texts, Cases, Materials. 2017.

CHMELÍKOVÁ, Barbora. Financial Decision-Making among Finance Students: An Empirical Study from the Czech Republic. In Proceedings of the 19th International Conference on Finance and Accounting. Zurich: World Academy of Science, Engineering and Technology, 2017, p. 49-52. ISSN 2010-3778.

POLČÁK, Radim. Information Society Between Orwell and Zapata: A Czech Perspective on Safe Harbours. In Graeme B. Dinwoodie. Secondary Liability of Internet Service Providers. Heidelberg: Springer International Publishing, 2017, p. 255-273. Ius Comparatum - Global Studies in Comparative Law. ISBN 978-3-319-55028-2. Available from: https://dx.doi.org/10.1007/978-3-319-55030-5.

POLČÁK, Radim and Dan Jerker B. SVANTESSON. Information Sovereignty - Data Privacy, Sovereign Powers and the Rule of Law. 1st ed. Cheltenham: Edward Elgar Publishing, 2017, 268 pp. 2017936584. ISBN 978-1-78643-921-5. Available from: https://dx.doi.org/10.4337/9781786439222.

CHMELÍKOVÁ, Barbora and Martin SVOBODA. Is the Financial Literacy Level of Finance and Law Students the Same? In Čulík, M. Conference Proceedings Financial Management of Firms and Financial Institutions. Ostrava: VŠB-TU of Ostrava, 2017, p. 336-341. ISBN 978-80-248-4138-0.

BOBKOVÁ, Markéta and Andrea HOLEŠINSKÁ. Networking in a destination from the perspective of virtual relationships and their spatial dimension. Geographia Technica. Cluj University Press, 2017, vol. 12, No 2, p. 10-19. ISSN 1842-5135. Available from: https://dx.doi.org/10.21163/GT_2017.122.02.

MOLEK, Pavel and Radim POLČÁK. Poskytnout nebo chránit? (Provide or Protect?). Brno: Nejvyšší správní soud, 2017, 293 pp. ACA Europe. ISBN 978-80-270-1645-7.

BOBKOVÁ, Markéta and Kamila POLEDNÍKOVÁ. Příčiny uspořádání síťových struktur v socioekonomickém kontextu (The causes of network structures´arrangement in the socioeconomic context). Online. In Ing. Bc. Andrea Holešinská, Ph.D. 8. mezinárodní kolokvium o cestovním ruchu. Sborník příspěvků. 1. vyd. Brno: Masarykova univerzita, 2017, p. 5-14. ISBN 978-80-210-8845-0.

BEČEV, Ondřej, Eva KOZÁKOVÁ, Radek MAREČEK, Josef MANA, Marie KUŘÁTKOVÁ, Lenka SAKÁLOŠOVÁ, Bartosz MAJCHROWICZ, Robert ROMAN and milan BRÁZDIL. Shaken Hearts and Confused Minds: Effect of Interoceptive Feedback Manipulation on Sense of Agency. In IX. Cracow Cognitive Science Conference. 2017.

BOBKOVÁ, Markéta and Svatava NUNVÁŘOVÁ. Služby cestovního ruchu a řízení jejich kvality: zaměření na úlohu veřejného sektoru (Tourism services and service quality management: a focus on the role of the public sector). Studia turistica. Jihlava: Vysoká škola polytechnická Jihlava, 2017, vol. 8, No 2, p. 7-17. ISSN 1804-252X.

VYSTOUPIL, Jiří, Martin ŠAUER and Markéta BOBKOVÁ. Spa, spa tourism and wellness tourism in the Czech Republic. Czech Journal of Tourism. Masarykova univerzita, 2017, Neuveden, No 1, p. 5-19. ISSN 1805-3580. Available from: https://dx.doi.org/10.1515/cjot-2017-0001.

POLČÁK, Radim. Stock Exchange Interconnections and Legal Issues in Data Exchange. Masaryk University Journal of Law and Technology. 2017, vol. 7, No 1, p. 351-362. ISSN 1802-5943. Available from: https://dx.doi.org/10.5817/MUJLT2017-2-7.

BOBKOVÁ, Markéta and Zuzana ČERNÍKOVÁ. The function of DMO in terms of the Czech environment: A case study of Prague. Online. In Book of extended abstracts. Portugal: Association for Tourism and Leisure Education and Research (ATLAS), 2017, p. 4-6. ISBN 978-90-75775-94-5. Available from: https://dx.doi.org/10.13140/RG.2.2.15310.36160.

KOŠČÍK, Michal, Radim POLČÁK, Matěj MYŠKA and Jakub HARAŠTA. Výzkumná data a výzkumné databáze. Právní rámec zpracování a sdílení vědeckých poznatků (Research data and research databases. Legal framework for the processing and sharing of scientific findings). 1st ed. Praha: Wolters Kluwer, 2017, 164 pp. Právní monografie. ISBN 978-80-7552-952-7.

BOBKOVÁ, Markéta and Svatava NUNVÁŘOVÁ. Význam turistických místních poplatků ve venkovských horských střediscích cestovního ruchu (The importance of tourist local taxes in rural mountain tourism regions). Online. In Fakulta regionálního rozvoje a mezinárodních studií. Region v rozvoji společnosti 2017. Brno: Mendelova univerzita, 2017, p. 67-77. ISBN 978-80-7509-548-0.

POLČÁK, Radim, Jakub MÍŠEK, Pavel LOUTOCKÝ, Jakub HARAŠTA, Václav STUPKA and Tomáš ABELOVSKÝ. Access to Telecommunication Data in Criminal Justice in Czech Republic and Slovakia. In Sieber, U., von zur Mühlen, N (eds.) Access to Telecommunication Data in Criminal Justice. 1st ed. Berlin: Duncker & Humblot, 2016, p. 247-435. Strafrechtliche Forschungsberichte. ISBN 978-3-428-15143-1.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Bridging the Gap between QM and MM with ReaxFF: Towards Accurate Reactive Molecular Dynamics of Enzymes. In Second CCPBioSim/CCP5 Multiscale Modelling Conference. 2016.

ŠTĚPÁNEK, Libor. Creativity: When Activity, Autonomy and Autenticity Meet. In 6th International Conference on Teaching English as a Foreign Language: Communication, culture and creativity in ELT classroom. 2016.

KOUKAL, Pavel and Radim POLČÁK. Česko-slovenské symposium Ochranné známky a průmyslové vzory (Czech-Slowak Symposion on the Trademarks and Industrial Designs Protection). 2016.

JANOŠ, Pavel, Tomáš TRNKA, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Different QM/MM Approaches To Elucidate Enzymatic Reactions: Case Study on ppGalNAcT2. Journal of Chemical Theory and Computation. Washington: American Chemical Society, 2016, vol. 12, No 12, p. 6062-6076. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/acs.jctc.6b00531.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA, Pavel LOUTOCKÝ and Libor KYNCL. European ICT Law 2016: Texts, Cases, Materials. 2016.

ŠTĚPÁNEK, Libor, Alena HRADILOVÁ, Hana REICHOVÁ and Kateřina SEDLÁČKOVÁ. Humanising Language Teaching. Velká Británie: Pilgrims, 2016. ISSN 1755-9715.

BOBKOVÁ, Markéta. Chápání pojmu aktér z pohledu destination governance (Understanding of the term actor from the perspective of destination governance). In Ing. Bc. Andrea Holešinská, Ph.D. 7. mezinárodní kolokvium o cestovním ruchu. Sborník příspěvků. 1. vyd. Brno: Masarykova univerzita, 2016, p. 6-14. ISBN 978-80-210-8527-5.

POLČÁK, Radim. Informace a data v právu (Information and Data in Law). Revue pro právo a technologie. Masarykova univerzita, 2016, vol. 7, No 13, p. 67-91. ISSN 1804-5383.

POLČÁK, Radim, Jakub MÍŠEK, Václav STUPKA, Pavel LOUTOCKÝ and Tomáš ABELOVSKÝ. Interception of electronic communications in the Czech Republic and Slovakia. 1st ed. Brno: Masaryk University, Faculty of Law, 2016, 241 pp. Publications of the Masaryk University, theoretical series, edition Scientia, File No. 573. ISBN 978-80-210-8423-0.

POLČÁK, Radim, Jakub MÍŠEK, Václav STUPKA, Pavel LOUTOCKÝ and Tomáš ABELOVSKÝ. Interception of electronic communications in the Czech Republic and Slovakia. 1st ed. Brno: Masarykova univerzita, 2016, 241 pp. Spisy Právnické fakulty MU (řada teoretická), č. 573. ISBN 978-80-210-8423-0.

KUCHAROVA, Daria. Internal Quality Assurance Practices in Czech Republic Higher Education. In Dagmar Špalková, Lenka Matějová. Proceedings of the 20th International Conference Current Trends in Public Sector Research. Brno: Masarykova Univerzita, 2016, p. 284-292. ISBN 978-80-210-8082-9.

POLČÁK, Radim. Nejdůležitější dopady všeobecného nařízení o ochraně osobních údajů (GDPR) (Most significant impact of the GDPR into the Czech law). Data Security Management. TATE International s.r.o., 2016, vol. 2016, No 4, p. 22-26. ISSN 1211-8737.

BOBKOVÁ, Markéta. Network structures and their impact on destination competitiveness – a case study of Vsacko (Czech Republic). Online. In Sustainability of Rural Areas in Practice. Conference Proceedings from International Scientific Conference. Nitra: Slovak University of Agriculture in Nitra, 2016, p. 123-132. ISBN 978-80-552-1574-7.

POLČÁK, Radim. Práva k datům spravovaným veřejnými knihovnami ve světle změn informačního zákona (Rights to Data Administered by Public Libraries in the Light of the Amendments of the Information Act). Knihovna. Praha: Národní knihovna ČR, 2016, vol. 27, No 1, p. 61-73. ISSN 1801-3252.

POLČÁK, Radim, Jakub HARAŠTA and Václav STUPKA. Právní problémy kybernetické bezpečnosti (Legal issues of cyber security). 1st ed. Brno: Masarykova univerzita, Právnická fakulta, 2016, 215 pp. Spisy PF MU, řada teoretická, Editio Scientia; sv. č. 576. ISBN 978-80-210-8426-1.

POLČÁK, Radim, Jakub HARAŠTA and Václav STUPKA. Právní problémy kybernetické bezpečnosti (Legal issues of cyber security). 1st ed. Brno: Masarykova univerzita, 2016. Spisy PF MU, řada teoretická, Editio Scientia; sv. č. 576. ISBN 978-80-210-8426-1.

HOLEŠINSKÁ, Andrea, Martin ŠAUER and Markéta BOBKOVÁ. Socio-cultural aspects of cooperation in a tourist destination. In ATLAS Annual Conference 2016. Tourism, Lifestyles and Locations. Canterbury, United Kingdom, 14-16 September, 2016. 2016.

OPÁLKA, Filip, Ivo BAROŇ and Rostislav MELICHAR. Strukturní podmíněnost hlubokých svahových deformací v anizotropním prostředí flyšového pásma Vnějších Západních Karpat. In Konference Svahové deformace a pseudokras. 2016.

PERCZEL, András, Atanas G. ATANASOV, Vladimír SKLENÁŘ, Jiří NOVÁČEK, Veronika PAPOUŠKOVÁ, Pavel KADEŘÁVEK, Lukáš ŽÍDEK, Henryk KOZLOWSKI, Joanna WATLY, Aleksandra HECEL, Paulina KOLKOWSKA, Jaroslav KOČA, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PRAVDA, David SEHNAL, Vladimír HORSKÝ, Stanislav GEIDL, Ricardo D. ENRIZ, Pavel MATĚJKA, Adéla JENIŠTOVÁ, Marcela DENDISOVÁ, Alžběta KOKAISLOVÁ, Volkmar WEISSIG, Mark OLSEN, Aidan COFFEY, Jude AJUEBOR, Ruth KEARY, Marta SANZ-GAITERO, Mark J. VAN RAAIJ, Olivia MCAULIFFE, Birgit WALTENBERGER, Andrei MOCAN, Karel ŠMEJKAL, Elke H. HEISS, Marc DIEDERICH, Robert MUSIOL, Janez KOŠMRLJ, Jaroslaw POLANSKI and Josef JAMPÍLEK. The Eighth Central European Conference “Chemistry towards Biology”: Snapshot. MOLECULES. Basel: MDPI AG, 2016, vol. 21, No 10, p. nestránkováno, 27 pp. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules21101381.

BOBKOVÁ, Markéta. Využití teorie her v konceptu destination governance (The use of game theory in the destination governance concept). In Klímová, V., Žítek, V. (eds.). XIX. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. Brno: Masarykova univerzita, 2016, p. 962-968. ISBN 978-80-210-8273-1. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P210-8273-2016-124.

BOBKOVÁ, Markéta and Šárka FRÁNKOVÁ. Význam síťování pro inovační politiku (The importance of networking for innovation policy). Online. In Fakulta regionálního rozvoje a mezinárodních studií. Region v rozvoji společnosti 2016. Brno: Mendelova univerzita, 2016, p. 77-89. ISBN 978-80-7509-459-9.

ŠTĚPÁNEK, Libor. A creative approach to language teaching: a way to recognise, encourage and appreciate students´ contributions to language classes. In Alany Maley and Nik Peachey. Creativity in the English language classroom. 1st ed. London: British Council, 2015, p. 98-103. ISBN 978-0-86355-767-5.

SKLÁDAL, Petr, Jan PŘIBYL, Veronika HORÁČKOVÁ, Martin PEŠL, Pavel BOUCHAL, Patrik GEREG, Martin JAKUBEC, Zdeněk FARKA and David KOVÁŘ. AFM for characterization of biomolecules, affinity complexes and cells. In SPM workshop 2015. 2015.

BENEŠOVÁ, Iva, Kristýna DLABKOVÁ, Tomáš VACULOVIČ, Viktor KANICKÝ and Jan PREISLER. Analýza zlatých nanočástic metodou SALD ICP MS (Gold nanoparticle analysis using SALD ICP MS). In 4. Konference České společnosti pro hmotnostní spektrometrii. 2015. ISBN 978-80-905045-4-7.

PRAVDA, Lukáš, Karel BERKA, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Crina-Maria IONESCU, Michal OTYEPKA and Jaroslav KOČA. Anatomy of protein channels. In CEITEC PhD Retreat, Valtice, The Czech Republic. 2015. ISBN 978-80-210-7825-3.

SKLÁDAL, Petr, Jan PŘIBYL, Veronika HORŇÁKOVÁ, Patrik GEREG, Zdenka FOHLEROVÁ, Martin JAKUBEC, Zdeněk FARKA, David KOVÁŘ and Martin PEŠL. Atomic force microscopy for characterization of biomolecules, affinity complexes and cells. Online. In Libuše Trnková. XV. Workshop of Physical Chemists and Electrochemists. Brno: Masaryk University, 2015, p. 38-39. ISBN 978-80-210-7857-4.

IONESCU, Crina-Maria, David SEHNAL, Francesco Luca FALGINELLA, Purbaj PANT, Lukáš PRAVDA, Tomáš BOUCHAL, Radka SVOBODOVÁ VAŘEKOVÁ, Stanislav GEIDL and Jaroslav KOČA. AtomicChargeCalculator: Interactive Web-based calculation of atomic charges in large biomolecular complexes and drug like molecules. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2015, vol. 7, No 50, p. "nestránkováno", 13 pp. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/s13321-015-0099-x.

SEDLÁČKOVÁ, Kateřina, Alena HRADILOVÁ and Libor ŠTĚPÁNEK. CASALC Review, č. 1, roč. 2015/2016. Brno: Česká a slovenská asosiace učitelů jazykových center na VŠ, 2015, 233 pp. ISSN 1804-9435.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Catalytic Mechanism of the ppGalNAcT2 Retaining Glycosyltransferase Inferred From QM/MM Calculations. In DFT 2015: 16th International Conference on Density Functional Theory and its Applications. 2015.

HOLEŠINSKÁ, Andrea and Markéta BOBKOVÁ. Destination networks as a tool for minimizing risk and improving the performance of a destination. Czech Journal of Tourism. Brno: Masarykova univerzita, 2015, vol. 4, No 2, p. 90-102. ISSN 1805-3580. Available from: https://dx.doi.org/10.1515/cjot-2015­­-0006.

HOLEŠINSKÁ, Andrea and Markéta BOBKOVÁ. Destination networks as a tool for minimizing risk and improving the performance of a destination. In ATLAS Annual Conference 2015. 2015.

JUŘÍK, Tomáš, Zdeněk FARKA, David KOVÁŘ, Pavel PODEŠVA, František FORET and Petr SKLÁDAL. Detection of glucose using gel-templated gold nanostructured electrodes. Online. In Libuše Trnková. XV. Workshop of Physical Chemists and Electrochemists. Brno: Masaryk University, 2015, p. 47-50. ISBN 978-80-210-7857-4.

POLČÁK, Radim. Digitisation, Cultural Institutions and Intellectual Property. Masaryk University Journal of Law and Technology. Brno: Masaryk University, 2015, vol. 9, No 2, p. 121-141. ISSN 1802-5943. Available from: https://dx.doi.org/10.5817/MUJLT2015-2-7.

KAŠPAROVÁ, Helena, Zuzana DVOŘÁKOVÁ, Daniel RENČIUK, Klára BEDNÁŘOVÁ, Iva KEJNOVSKÁ, Lukáš TRANTÍREK, Michaela VORLÍČKOVÁ and Janos SAGI. Diverse effects of naturally occurring base lesions on the structure and stability of the human telomere DNA quadruplex. Biochimie. Paris: Elsevier France- editions Scientifiques Medicales Elsevier, 2015, vol. 118, Nov, p. 15-25. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2015.07.013.

POLČÁK, Radim, František PÚRY, Jakub HARAŠTA, Tomáš ABELOVSKÝ, Petr KLEMENT, Matěj MYŠKA, Václav STUPKA, Alena PEJČOCHOVÁ and Tomáš ELBERT. Elektronické důkazy v trestním řízení (Electronic evidence in criminal procedure). 1st ed. Brno: Masarykova univerzita, 2015, 254 pp. ISBN 978-80-210-8073-7.

POLČÁK, Radim, František PÚRY, Jakub HARAŠTA, Tomáš ABELOVSKÝ, Petr KLEMENT, Matěj MYŠKA, Václav STUPKA, Alena PEJČOCHOVÁ and Tomáš ELBERT. Elektronické důkazy v trestním řízení (Electronic evidence in criminal procedure). 1st ed. Brno: Masarykova univerzita, 2015, 254 pp. Acta Universitatis Brunensis Iuridica. ISBN 978-80-210-8073-7.

MISHRA, Sushil Kumar, Gaetano CALABRO, Hannes H. LOEFFLER, Julien MICHEL and Jaroslav KOČA. Evaluation of Selected Classical Force Fields for Alchemical Binding Free Energy Calculations of Protein-Carbohydrate Complexes. Journal of Chemical Theory and Computation. Washington D.C.: American Chemical Society, 2015, vol. 11, No 7, p. 3333-3345. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/acs.jctc.5b00159.

KUMARI, Manju, Stanislav KOZMON, Petr KULHÁNEK, Jakub ŠTĚPÁN, Igor TVAROŠKA and Jaroslav KOČA. Exploring Reaction Pathways for O-GlcNAc Transferase Catalysis. A String Method Study. Journal of Physical Chemistry B. WASHINGTON: AMER CHEMICAL SOC, 2015, vol. 119, No 12, p. 4371-4381. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/jp511235f.

ISLAM, Barira, Petr STADLBAUER, Miroslav KREPL, Jaroslav KOČA, Stephen NEIDLE, Shozeb HAIDER and Jiří ŠPONER. Extended molecular dynamics of a c-kit promoter quadruplex. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 18, p. 8673-8693. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv785.

JUŘÍK, Tomáš, Zdeněk FARKA, David KOVÁŘ, Pavel PODEŠVA, František FORET and Petr SKLÁDAL. Gelatin templated gold nanostructured electrodes for sensitive glucose detection. In CEITEC PhD Retreat. 2015. ISBN 978-80-210-7825-3.

STADLBAUER, Petr, Petra KUHROVÁ, Pavel BANÁŠ, Jaroslav KOČA, Giovanni BUSSI, Lukáš TRANTÍREK, Michal OTYEPKA and Jiří ŠPONER. Hairpins participating in folding of human telomeric sequence quadruplexes studied by standard and T-REMD simulations. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 20, p. 9626-9644. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv994.

GEIDL, Stanislav, Tomáš BOUCHAL, Tomáš RAČEK, Radka SVOBODOVÁ VAŘEKOVÁ, Václav HEJRET, Aleš KŘENEK, Ruben ABAGYAN and Jaroslav KOČA. High-quality and universal empirical atomic charges for chemoinformatics applications. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2015, vol. 7, DEC, p. 1-10. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/s13321-015-0107-1.

GEIDL, Stanislav, Radka SVOBODOVÁ VAŘEKOVÁ, Veronika BENDOVÁ, Lukáš PETRUSEK, Crina-Maria IONESCU, Zdeněk JURKA, Ruben A. ABAGYAN and Jaroslav KOČA. How Does the Methodology of 3D Structure Preparation Influence the Quality of pK(a) Prediction? Journal of Chemical Information and Modeling. WASHINGTON: AMER CHEMICAL SOC, 2015, vol. 55, No 6, p. 1088-1097. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/ci500758w.

JÄGEROVÁ, Kateřina, Iva BENEŠOVÁ, Kristýna DLABKOVÁ, Ondřej POLANSKÝ, Viktor KANICKÝ and Jan PREISLER. HPLC separace ve spojení s ESI, MALDI a SALD ICP MS pro analýzu metallothioneinů (LC coupling with ESI, MALDI and SALD ICP MS analysis for metallothionein characterization). In 4. Konference české společnosti pro hmotnostní spektrometrii. 2015. ISBN 978-80-905045-4-7.

JANOUŠKOVÁ, Eliška, Ivona NEČASOVÁ, Jana PAVLOUŠKOVÁ, Michal ZIMMERMANN, Milan HLUCHÝ, María Victoria MARINI PALOMEQUE, Monika NOVÁKOVÁ and Ctirad HOFR. Human Rap1 modulates TRF2 attraction to telomeric DNA. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 5, p. 2691-2700. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv097.

ŠTĚPÁNEK, Libor. Implementing Creativity in Language Learning: A Practical Guide. In Andreas Hettiger. Vorsprung durch Sprachen. 1st ed. Bochum: AKS-Verlag Bochun, 2015, p. 285-299. ISBN 978-3-925453-61-8.

NAVRÁTILOVÁ, Jarmila, Zuzana BUDKOVÁ, Ludmila JIRÁKOVÁ, Kristýna DLABKOVÁ, Jan PREISLER and Jan ŠMARDA. Inhibition of Akt kinase increases cytotoxicity of metaiodobenzylguanidine to neuroblastoma cells. In EACR-OECI Conference Precision Medicine for Cancer. 2015.

BOBKOVÁ, Markéta. Inovace a jejich význam v cestovním ruchu (Innovation and its significance to tourism). In Ing. Bc. Andrea Holešinská, Ph.D. 6. mezinárodní kolokvium o cestovním ruchu. Sborník příspěvků. 1. vyd. Brno: Masarykova univerzita, 2015, p. 7-13. ISBN 978-80-210-8117-8.

BENEŠOVÁ, Iva, Kristýna DLABKOVÁ, Tomáš VACULOVIČ, Antonín BEDNAŘÍK, Viktor KANICKÝ and Jan PREISLER. Investigation of substrate-assisted laser desorption for gold nanoparticle analysis with ICP MS. In 63th ASMS Conference on Mass Spectrometry and Allied Topics. 2015.

BÁRDY, Pavol, Martin BENEŠÍK, Marta ŠIBOROVÁ and Roman PANTŮČEK. Klonovanie génu domnelej hydrolázy tmpE bakteriofága 812 a jeho expresia pre 3D štruktúrnu analýzu (Cloning of putative hydrolase gene tmpE of phage 812 and its expression for 3D structural analysis). In Študentská vedecká konferencia PriF UK 2015. Sborník recenzovaných príspevkov. Bratislava: Univerzita Komenského v Bratislave, 2015, p. 60-65. ISBN 978-80-223-3859-2.

POLČÁK, Radim. Kybernetická bezpečnost jako aktuální fenomén českého práva (Cybersecurity as recent phenomenon of the Czech law). Revue pro právo a technologie. Masarykova univerzita, 2015, vol. 6, No 11, p. 95-151. ISSN 1804-5383.

ČERNÁ, Kateřina, Jan OPPELT, Lenka RADOVÁ, Kateřina MUSILOVÁ, Václav ŠEDA, Gabriela PAVLASOVÁ, Michal JEŽ, Nikola TOM, Filip PARDY, Jitka MALČÍKOVÁ, Karla PLEVOVÁ, Boris TICHÝ, Yvona BRYCHTOVÁ, Michael DOUBEK, Martin TRBUŠEK, Jiří MAYER, Jaroslav KOČA, R. CALOGERO, Šárka POSPÍŠILOVÁ and Marek MRÁZ. MicroRNA involvement in DNA damage response and BCR signaling in malignant B cells. In AACR Annual Meeting 2015. 2015.

ČERNÁ, Kateřina, Jan OPPELT, Lenka RADOVÁ, Kateřina MUSILOVÁ, Václav ŠEDA, Gabriela PAVLASOVÁ, Michal JEŽ, Nikola TOM, Jitka MALČÍKOVÁ, Boris TICHÝ, Yvona BRYCHTOVÁ, Michael DOUBEK, Martin TRBUŠEK, Jiří MAYER, Jaroslav KOČA, M. ARIGONI, F. RICARDO, R. CALOGERO, Šárka POSPÍŠILOVÁ and Marek MRÁZ. MicroRNAs in DNA damage response and BCR signaling in malignant B cells. In MicroRNAs and Noncoding RNAs in Cancer. 2015.

OPPELT, Jan, Jaroslav KOČA and Marek MRÁZ. miRNome-wide regulation of microRNA expression. In Algorithmics, Bioinformatics and Statistics for NGS data analysis. 2015.

PRAVDA, Lukáš, Karel BERKA, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Michal OTYEPKA and Jaroslav KOČA. MOLE 2.5: Improved Tool for Analysis of Ligand-Accessible Channels. In ISMB/ECCB 2015, Dublin, Ireland. 2015.

ESTARELLAS MARTIN, Carolina, Michal OTYEPKA, Jaroslav KOČA, Pavel BANÁŠ, Miroslav KREPL and Jiří ŠPONER. Molecular dynamic simulations of protein/RNA complexes: CRISPR/Csy4 endoribonuclease. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS. AMSTERDAM: ELSEVIER SCIENCE BV, 2015, vol. 1850, No 5, p. 1072-1090. ISSN 0304-4165. Available from: https://dx.doi.org/10.1016/j.bbagen.2014.10.021.

SVOBODOVÁ VAŘEKOVÁ, Radka, Lukáš PRAVDA, David SEHNAL, Crina-Maria IONESCU and Jaroslav KOČA. MotiveQuery: Web application for fast detection of biomacromolecular fragments in the entire Protein Data Bank. In ISMB/ECCB 2015, Dublin, Ireland. 2015.

FARKA, Zdeněk, Tomáš JUŘÍK, David KOVÁŘ, Pavel PODEŠVA, František FORET and Petr SKLÁDAL. Nanostructured gold electrodes for determination of glucose in blood. Online. In František Foret, Jana Křenková, Iveta Drobníková, Karel Klepárník. CECE 2015. Brno: Institute of Analytical Chemistry of the CAS, v. v. i., 2015, p. 54-57. ISBN 978-80-904959-3-7.

BOBKOVÁ, Markéta. Network structures and their impact on destination competitiveness – a case study of Vsacko (Czech Republic). In Sustainability of Rural Areas in Practice. 2015.

BOBKOVÁ, Markéta. Networks and their structures in the concept of destination governance. In Klímová, V., Žítek, V. (eds.). XVIII. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. Brno: Masarykova univerzita, 2015, p. 666-672. ISBN 978-80-210-7861-1. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P210-7861-2015-89.

SEHNAL, David, Lukáš PRAVDA, Radka SVOBODOVÁ VAŘEKOVÁ, Crina-Maria IONESCU and Jaroslav KOČA. PatternQuery: web application for fast detection of biomacromolecular structural patterns in the entire Protein Data Bank. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, W1, p. "W383"-"W388", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv561.

PRAVDA, Lukáš, David SEHNAL, Radka SVOBODOVÁ VAŘEKOVÁ, Crina-Maria IONESCU and Jaroslav KOČA. PatternQuery: Web application for fast detection of biomacromolecular structural patterns in the entire Protein Data Bank. In 3Dsig meeting at ISMB/ECCB 2015, Dublin, Ireland. 2015.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Photorhabdus asymbiotica lectins: structure and function of putative virulence factors. In XVII. setkání biochemiků a molekulárních biologů. 2015. ISBN 978-80-210-8015-7.

POLČÁK, Radim, Zdeněk ŘÍHA and Kamil MALINKA. Právní aspekty interních instrukcí – část II. (Legal aspects of internal directives - part II.). Data Security Management. Praha: TATE International s.r.o., 2015, XIX., 3., p. 36-38. ISSN 1211-8737.

POLČÁK, Radim, Zdeněk ŘÍHA and Kamil MALINKA. Právní aspekty interních směrnic – část I. (Legal aspects of internal directives - part I.). Data Security Management. Praha: TATE International s.r.o., 2015, XIX., 2., p. 36-39. ISSN 1211-8737.

FARKA, Zdeněk, David KOVÁŘ and Petr SKLÁDAL. Quartz crystal microbalance biosensor for rapid detection of aerosolized microorganisms. Online. In Augustus Way Fountain. Proc. SPIE 9455, Chemical, Biological, Radiological, Nuclear, and Explosives (CBRNE) Sensing XVI. USA: SPIE, 2015, p. 1-9. ISBN 978-1-62841-571-1. Available from: https://dx.doi.org/10.1117/12.2084606.

FARKA, Zdeněk, David KOVÁŘ and Petr SKLÁDAL. Rapid Detection of Microorganisms Based on Active and Passive Modes of QCM. Sensors. Basel, (Switzerland): MDPI AG, 2015, vol. 15, No 1, p. 79-92. ISSN 1424-8220. Available from: https://dx.doi.org/10.3390/s150100079.

JANOŠ, Pavel, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Reaction mechanism of ppGalNAcT2: QM/MM Metadynamics and String Method. In CEITEC PhD Retreat. 2015. ISBN 978-80-210-7825-3.

JANOŠ, Pavel, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Reaction mechanism study of retaining glycosyltransferase using QM/MM metadynamics and string method. In Computational Advances in Drug Discovery. 2015.

OPPELT, Jan, Jaroslav KOČA and Marek MRÁZ. Regulation of microRNA expression based on their common factors and properties (Regulace exprese microRNA zalozene na spolecnych faktorech a vlastnostech). In CEITEC PhD retreat. 2015. ISBN 978-80-210-7825-3.

OPPELT, Jan, Jaroslav KOČA and Marek MRÁZ. Regulation of microRNA expression based on their common factors and properties. In CEITEC PhD retreat. 2015. ISBN 978-80-210-7825-3.

BÁRDY, Pavol, Martin BENEŠÍK, Marta ŠIBOROVÁ, Pavel PLEVKA and Roman PANTŮČEK. Revealing the virion structure of staphylococcal phage 812: Analysis of putative tail hydrolase. In R. Gaillyová, I. Valášková, M. Jarkovská. Týden lékařské genetiky v Brně: The Biomania Student Scientific Meeting 2015. Brno: Masarykova univerzita, 2015, p. 36. ISBN 978-80-210-7933-5.

KÚTNÁ, Andrea, Kristýna DLABKOVÁ, Antonín BEDNAŘÍK, Viktor KANICKÝ and Jan PREISLER. Stanovení kovů v biologických vzorcích metodou DLTV ICP MS (Determination of metals in biological samples by DLTV ICP MS). In Veletrh vědy 2015. 2015.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Stepwise Catalytic Mechanism via Short-Lived Intermediate Inferred from Combined QM/MM MERP and PES Calculations on Retaining Glycosyltransferase ppGalNAcT2. PLoS Computational Biology. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2015, vol. 11, No 4, p. "nestránkováno", 21 pp. ISSN 1553-734X. Available from: https://dx.doi.org/10.1371/journal.pcbi.1004061.

SÝKOROVÁ, Petra, Jitka NOVOTNÁ, Gabriel DEMO, Eva DUBSKÁ, Jan KOMÁREK, Martina POKORNÁ and Michaela WIMMEROVÁ. Structure and specificity of lectin from bacterium Burkholderia pseudomallei. 2015.

POLČÁK, Radim. šéfredaktor a člen Redakční rady časopisu Masaryk University Journal of Law and Technology. 2015 - 2099.

POLČÁK, Radim. The European obession with food indications. Corporate Governance eJournal. Gold Coast, Australia: Bond University, 2015, vol. 2015, No 34, p. 1-10. ISSN 1836-1110.

ŠTĚPÁNEK, Libor. The Magic of Creativity: From Robust Theories to Delicate Use. In Conference: Opportunities and Challenges in Language Teaching and Learning, Mladá Boleslav. 2015.

BOBKOVÁ, Markéta. The Process of Managing a Destination in Lower and Upper Austria. Czech Journal of Tourism. Brno: Masarykova univerzita, 2015, IV, No 1, p. 5-25. ISSN 1805-3580. Available from: https://dx.doi.org/10.1515/cjot-2015-0001.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Towards Fast and Accurate Reactive Molecular Dynamics of Enzymes. In TheoBio2015: 7th International Theoretical Biophysics Symposium. 2015.

ŠTĚPÁNEK, Libor. Using creative teaching to develop learner autonomy. In The webinar for IATEFL Learner Autonomy Special Interest Group IATEFL (LASIG). 2015.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PRAVDA, Crina-Maria IONESCU, Stanislav GEIDL, Vladimír HORSKÝ, Deepti JAISWAL, Michaela WIMMEROVÁ and Jaroslav KOČA. ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank. Nucleic Acids Research. United Kingdom: Oxford University Press, 2015, vol. 43, D1, p. "D369"-"D375", 7 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gku1118.

SVOBODOVÁ VAŘEKOVÁ, Radka, David SEHNAL, Lukáš PRAVDA, Crina-Maria IONESCU and Jaroslav KOČA. ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank. In 3Dsig meeting at ISMB/ECCB 2015, Dublin, Ireland. 2015.

BOBKOVÁ, Markéta. Výzkumná témata v politice cestovního ruchu (Research topics in tourism policy). Online. In RNDr. Mgr. Stanislava Pachrová, Ph.D., Ing. Bc. Martina Doležalová. 10. mezinárodní konference Aktuální problémy cestovního ruchu. Sborník z mezinárodní konference. Jihlava: Vysoká škola polytechnická Jihlava, 2015, p. 22-33. ISBN 978-80-88064-09-1.

SEHNAL, David, Lukáš PRAVDA, Crina-Maria IONESCU, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. WebChemistry: a platform for the detection, validation, comparison, and characterization of structural patterns in biomacromolecules. In ISMB/ECCB 2015, Dublin, Ireland. 2015.

JANOŠ, Pavel, Stanislav KOZMON and Jaroslav KOČA. Ab Initio QM/MM molecular dynamics simulations of glycosyltransferases. In 13th European Training Course on Carbohydrates. 2014.

PRAVDA, Lukáš, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Crina-Maria IONESCU, Karel BERKA, Michal OTYEPKA and Jaroslav KOČA. Anatomy of enzymatic channels and algorithm for its detection. In 13th European Conference on Computational Biology, Strasbourg, France. 2014.

PRAVDA, Lukáš, Karel BERKA, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Pavel BANÁŠ, Laskowski ROMAN A, Jaroslav KOČA and Michal OTYEPKA. Anatomy of Enzyme Channels. BMC Bioinformatics. England: BioMed Central Ltd, 2014, vol. 15, november, p. "nestránkováno", 8 pp. ISSN 1471-2105. Available from: https://dx.doi.org/10.1186/s12859-014-0379-x.

SVOBODOVÁ VAŘEKOVÁ, Radka, Stanislav GEIDL, David SEHNAL, Lukáš PRAVDA, Zdeněk JURKA, Crina-Maria IONESCU and Jaroslav KOČA. Atomic charge based descriptors and their applications in QSAR. In 20th EuroQSAR - Understanding Chemical-Biological Interactions, St. Petersburg, Russia. 2014.

ČERNÁ, Kateřina, Jan OPPELT, Lenka RADOVÁ, Filip PARDY, Nikola TOM, Kateřina MUSILOVÁ, Jitka MALČÍKOVÁ, Karla PLEVOVÁ, Boris TICHÝ, Yvona BRYCHTOVÁ, Michael DOUBEK, Martin TRBUŠEK, Jaroslav KOČA, Calogero RINOLDO, Jiří MAYER, Šárka POSPÍŠILOVÁ and Marek MRÁZ. Biological and clinical relevance of mirnas induced in chronic lymphocytic leukemia (CLL) cells during administration of therapy in vivo and in vitro. 2014. ISSN 0390-6078.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Catalytic Mechanism of the ppGalNAcT2 Retaining Glycosyltransferase Inferred From QM/MM Calculations. In GLYCO-T 2014: 9th International Symposium on Glycosyltransferases. 2014.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Catalytic Mechanism of the ppGalNAcT2 Retaining Glycosyltransferase Inferred From QM/MM Calculations. In CEITEC Annual Conference. 2014.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Combined QM/MM MERP and PES calculations on retaining glycosyltransferase ppGalNAcT2. In 13th Bratislava Symposium on Saccharides – “Recent Advances in Glycomics”. 2014.

JAISWAL, Deepti, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Crina-Maria IONESCU, Stanislav GEIDL, Lukáš PRAVDA, Vladimír HORSKÝ, Michaela WIMMEROVÁ and Jaroslav KOČA. Consistency of sugar structures and their annotation in the PDB. In 13th European Conference on Computational Biology, Strasbourg, France. 2014.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Ondřej ŠULÁK, Jan KOMÁREK and Michaela WIMMEROVÁ. Crystallization and functional studies of trimeric lectin RS20L from bacterium Ralstonia solanacearum. In Zborník prednášok a posterov, program. 2014. ISBN 978-80-970164-6-3.

WIMMEROVÁ, Michaela, Josef HOUSER and Eva DUBSKÁ. Current State-of-Art to Study Biomolecular Interactions and Assemblies in Life Sciences. 2014.

BOBKOVÁ, Markéta. Destination governance v kontextu institucionálních teorií regionálního rozvoje (Destination Governance in the context of institutional theories of regional development). In Holešinská, A. 5. mezinárodní kolokvium o cestovním ruchu. Sborník příspěvků. Pavlov, 11.–12. září 2014. Brno: Masarykova univerzita, 2014, p. 7-15. ISBN 978-80-210-7585-6.

KOVÁŘ, David, Zdeněk FARKA and Petr SKLÁDAL. Detection of Aerosolized Biological Agents Using the Piezoelectric Immunosensor. Analytical Chemistry. Washington, D.C., USA: American Chemical Society, 2014, vol. 86, No 17, p. 8680-8686. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/ac501623m.

KŘÍŽ, Zdeněk, Jan ADAM, Jana MRÁZKOVÁ, Petros ZOTOS, Thomais CHATZIPAVLOU, Michaela WIMMEROVÁ and Jaroslav KOČA. Engineering the Pseudomonas aeruginosa II lectin: designing mutants with changed affinity and specificity. Journal of Computer-Aided Molecular Design. Dordrecht (Netherlands): Springer International Publishing, 2014, vol. 28, No 9, p. 951-960. ISSN 0920-654X. Available from: https://dx.doi.org/10.1007/s10822-014-9774-7.

MISHRA, Sushil Kumar, Mahmut KARA, Martin ZACHARIAS and Jaroslav KOČA. Enhanced conformational sampling of carbohydrates by Hamiltonian replica-exchange simulation. Glycobiology. United Kingdom: Oxford University Press, 2014, vol. 24, No 1, p. 70-84. ISSN 0959-6658. Available from: https://dx.doi.org/10.1093/glycob/cwt093.

KUMARI, Manju, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Exploring the Reaction Mechanism of O-GlcNAc Transferase using QM/MM Molecular Dynamics. In ICS 2014 - 27th International Carbohydrate Symposium. 2014.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Stanislav HUSZÁR, Katarina MIKUŠOVÁ and Michaela WIMMEROVÁ. Expression of mycobacterial glycosyltransferase GlfT1 in fusion with MBP. Online. In Martin Seamus. FEBS Journal. 1th ed. Neuveden: Wiley, 2014, p. 740-741. ISSN 1742-4658. Available from: https://dx.doi.org/10.1111/febs.12919.

GEIDL, Stanislav, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PETRUSEK, Crina-Maria IONESCU, David SEHNAL and Jaroslav KOČA. How the methodology of 3D structure preparation influences the quality of pKa prediction? In 20th EuroQSAR - Understanding Chemical-Biological Interactions, St. Petersburg, Russia. 2014.

ZÁBRADY, Kateřina, Marek ADAMUS, Hana SKOUPILOVÁ, Lenka JURČIŠINOVÁ, Chunyan LIAO, Alan R. LEHMANN and Jan PALEČEK. Chromosomal association of the SMC5-6 complex is dependent on interaction of its Nse1-Nse3-Nse4 subcomplex with DNA. In Annual Conference Brno 2014: Frontiers in Material and Life Sciences. 2014.

ČERNÁ, Kateřina, Jan OPPELT, Lenka RADOVÁ, Kateřina MUSILOVÁ, Nikola TOM, Filip PARDY, Jitka MALČÍKOVÁ, Karla PLEVOVÁ, Boris TICHÝ, Yvona BRYCHTOVÁ, Michael DOUBEK, Martin TRBUŠEK, Jiří MAYER and Jaroslav KOČA. Identification of microRNAs involved in DNA damage response in malignant B cells and their biological and clinical relevance. In AACR Annual Meeting, San Diego. 2014.

ČERNÁ, Kateřina, Jan OPPELT, Lenka RADOVÁ, Nikola TOM, Kateřina MUSILOVÁ, Jitka MALČÍKOVÁ, Karla PLEVOVÁ, Boris TICHÝ, Yvona BRYCHTOVÁ, Michael DOUBEK, Martin TRBUŠEK, Jaroslav KOČA, Jiří MAYER, Šárka POSPÍŠILOVÁ and Marek MRÁZ. Identification of microRNAs involved in DNA damage response in malignant B cells and their biological and clinical relevance. In CEITEC Annual Conference "Frontiers in Material and Life Sciences. 2014.

GKIONIS, Konstantinos, Holger KRUSE, James PLATTS, Arnošt MLÁDEK, Jaroslav KOČA and Jiří ŠPONER. Ion Binding to Quadruplex DNA Stems. Comparison of MM and QM Descriptions Reveals Sizable Polarization Effects Not Included in Contemporary Simulations. Journal of Chemical Theory and Computation. Washington DC: American Chemical Society, 2014, vol. 10, No 3, p. 1326-1340. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/ct4009969.

GEIDL, Stanislav, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PETRUSEK, David SEHNAL and Jaroslav KOČA. Jaký vliv na přesnost QSPR modelů má metodika přípravy 3D struktury? Případová studie pro predikci pKa. In ENBIK - Národní bioinformatická konference. 2014. ISBN 978-80-7080-883-2.

PAVLIŇÁK, David, Milan ALBERTI, Pavel HYRŠL, Veronika ŠVACHOVÁ, Lucy VOJTOVÁ and Josef JANČÁŘ. Kompozice pro přípravu modifikovaných želatinových nanovláken a nanovlákna (Composition for the preparation of modified gelatinous nanofibers and nanofibers per se). 2014.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Crina-Maria IONESCU, Stanislav GEIDL, Lukáš PRAVDA, Deepti JAISWAL, Michaela WIMMEROVÁ and Jaroslav KOČA. Ligand structures in the Protein Data Bank – can we trust them? In 10th International Conference on Chemical Structures and 10th German Conference on Chemoinformatics, Noordwijkerhout, The Netherlands. 2014.

JANOŠ, Pavel, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Modeling of the N-Acetylglucosaminyltransferase V (GnT-V). In CEITEC Annual Conference : “Frontiers in Material and Life Sciences ”. 2014. ISBN 978-80-210-7159-9.

PRAVDA, Lukáš, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Crina-Maria IONESCU, Karel BERKA, Michal OTYEPKA and Jaroslav KOČA. MOLE: Pokročilý nástroj pro vyhledávání a charakterizaci tunelů. In ENBIK - Národní bioinformatická konference. 2014. ISBN 978-80-7080-883-2.

PRAVDA, Lukáš, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Crina-Maria IONESCU and Jaroslav KOČA. MotiveQuery: Language and Web Service for Fast Identification of Protein Structural Motifs in the Entire Protein Data Bank. In 10th International Conference on Chemical Structures and 10th German Conference on Chemoinformatics, Noordwijkerhout, The Netherlands. 2014.

SVOBODOVÁ VAŘEKOVÁ, Radka, Deepti JAISWAL, David SEHNAL, Crina-Maria IONESCU, Stanislav GEIDL, Lukáš PRAVDA, Vladimír HORSKÝ, Michaela WIMMEROVÁ and Jaroslav KOČA. MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes. Nucleic Acids Research. Oxford, UK: Oxford University Press, 2014, vol. 42, W1, p. "W227"-"W233", 7 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gku426.

SVOBODOVÁ VAŘEKOVÁ, Radka, Deepti JAISWAL, David SEHNAL, Crina-Maria IONESCU, Stanislav GEIDL, Lukáš PRAVDA, Vladimír HORSKÝ, Michaela WIMMEROVÁ and Jaroslav KOČA. MotiveValidator: software for validation of ligand and residue structures in biomolecular complexes. 2014.

RAČEK, Tomáš, Radka SVOBODOVÁ VAŘEKOVÁ, Aleš KŘENEK, Tomáš BOUCHAL and Jaroslav KOČA. NEEMP – Tool for parameterization of empirical charge calculation method EEM. In Chemoinformatics Strasbourg Summer School 2014. 2014.

SÝKOROVÁ, Petra, Jitka NOVOTNÁ, Gabriel DEMO, Eva DEJMKOVÁ, Jan KOMÁREK, Lucia HÁRONÍKOVÁ, Annabelle VARROT, Anne IMBERTY, Martina POKORNÁ and Michaela WIMMEROVÁ. New family of bacterial lectins with seven bladed beta propeller fold. In Krystalografická společnost, Struktura 2014. 2014. ISSN 1805-4382.

JANČAŘÍKOVÁ, Gita, Gabriel DEMO, Jan KOMÁREK and Michaela WIMMEROVÁ. Newly identified lectin from Photorhabdus asymbiotica and its structure-functional study. In XVI. Setkání biochemiků a molekulárních biologů. 2014. ISBN 978-80-210-7340-1.

FARKA, Zdeněk, David KOVÁŘ and Petr SKLÁDAL. Piezoelectric biosensors for detection of microorganisms. Online. In Libuše Trnková. XIV. Pracovní setkání fyzikálních chemiků a elektrochemiků. Vydání první. Brno: Masarykova univerzita, 2014, p. 32-35. ISBN 978-80-210-6842-1.

FARKA, Zdeněk, David KOVÁŘ and Petr SKLÁDAL. Piezoelectric Immunosensor for Detection of Aerosolized Microorganisms. In CEITEC Annual Conference 2014: Frontiers in Material and Life Sciences. 2014. ISBN 978-80-210-7159-9.

DEMO, Gabriel, Veronika HORSKÁ, Barbora FLIEDROVA, Jakub ŠTĚPÁN, Jaroslav KOČA, Lenka WEIGNEROVA, Vladimír KŘEN and Michaela WIMMEROVÁ. Protein engineering study of beta-mannosidase to set up a potential chemically efficient biocatalyst. Glycobiology. Oxford: Oxford University Press, 2014, vol. 24, No 12, p. 1301-1311. ISSN 0959-6658. Available from: https://dx.doi.org/10.1093/glycob/cwu074.

KOZMON, Stanislav, Manju KUMARI, Igor TVAROŠKA and Jaroslav KOČA. QM/MM Molecular Dynamics Study of the O-GlcNAc Transferase Reaction Mechanism. In 9th International Symposium on Glcosyltransferases. 2014.

KYSEĽ, Peter, Nikola KOSTLÁNOVÁ, Stanislav HUSZÁR, Katarina MIKUŠOVÁ and Michaela WIMMEROVÁ. Structural studies of mycobacterial glycosyltransferase GlfT1. In CEITEC Annual Conference : “Frontiers in Material and Life Sciences ”. 2014. ISBN 978-80-210-7159-9.

DUBSKÁ, Eva, Jana MRÁZKOVÁ, Lenka MALINOVSKÁ, Lenka ADAMOVÁ, Gabriel DEMO, Martina POKORNÁ and Michaela WIMMEROVÁ. Studies of mutant lectin binding behaviour by microcalorimetry. In 2014 XVIII ISBC Conference, International Society for Biological Calorimetry. 2014.

MRÁZKOVÁ, Jana, Martina POKORNÁ and Michaela WIMMEROVÁ. Targeted-random mutagenesis of PA-IIL lectin and high-throughput screening of mutant library. In XVI. Setkání biochemiků a molekulárních biologů. 2014. ISBN 978-80-210-7340-1.

HOLEŠINSKÁ, Andrea and Markéta NOVOTNÁ. Tourism destination governance v kontextu teoretických poznatků (TOURISM DESTINATION GOVERNANCE IN THE THEORETICAL CONTEXT). In Klímová, V., Žítek, V. XVII. mezinárodní kolokvium o regionálních vědách. Sborník příspěvků. Brno: Masarykova univerzita, 2014, p. 796-801. ISBN 978-80-210-6840-7. Available from: https://dx.doi.org/10.5817/CZ.MUNI.P210-6840-2014-103.

STADLBAUER, Petr, Lukáš TRANTÍREK, Thomas E. CHEATHAM III., Jaroslav KOČA and Jiří ŠPONER. Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations. Biochimie. Paris: ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER, 2014, 105c, October, p. 22-35. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2014.07.009.

PROCHÁZKA, Pavel, Jindřich MACH, Dominik BISCHOFF, Zuzana LIŠKOVÁ, Petr DVOŘÁK, Marek VAŇATKA, Pauline SIMONET, Anastasia VARLET, Dušan HEMZAL, Martin PETRENEC, Lukáš KALINA, Miroslav BARTOŠÍK, Klaus ENSSLIN, Peter VARGA, Jan ČECHAL and Tomáš ŠIKOLA. Ultrasmooth metallic foils for growth of high quality graphene by chemical vapor deposition. NANOTECHNOLOGY. BRISTOL: IOP PUBLISHING LTD, 2014, vol. 25, No 18, p. 1-8. ISSN 0957-4484. Available from: https://dx.doi.org/10.1088/0957-4484/25/18/185601.

ROZMAN, Tomáš, Zdeněk FARKA, Jan HAVLIŠ, Přemysl LUBAL and Marta FARKOVÁ. Use of artificial neural networks for optimization of biogenic amines derivatization. Online. In František Foret, Jana Křenková, Iveta Drobníková, Andras Guttman, Karel Klepárník. CECE 2014: 11TH INTERNATIONAL INTERDISCIPLINARY MEETING ON BIOANALYSIS. Brno: Institute of Analytical Chemistry AS CR, 2014, p. 377-380. ISBN 978-80-904959-2-0.

SVOBODOVÁ VAŘEKOVÁ, Radka, Deepti JAISWAL, David SEHNAL, Crina-Maria IONESCU, Stanislav GEIDL, Lukáš PRAVDA, Vladimír HORSKÝ, Michaela WIMMEROVÁ and Jaroslav KOČA. ValidatorDB: database of validation results for ligands and non-standard residues from the Protein Data Bank. 2014.

OPPELT, Jan, Jonathon BLAKE, Vladimír BENEŠ and Jaroslav KOČA. Vliv sekvenační délky na rekonstroukci transkriptomu s využitím RNA-Seq (Influence of read length on transcriptome reconstruction using RNA-Seq). In ENBIK2014 - Národní bioinformatická konference. 2014. ISBN 978-80-7080-883-2.

GEIDL, Stanislav, David SEHNAL, Crina-Maria IONESCU, Radka SVOBODOVÁ VAŘEKOVÁ, Purbaj PANT and Jaroslav KOČA. Web server for the rapid calculation of empirical atomic charges with QM accuracy. In 10th International Conference on Chemical Structures and the 10th German Conference on Chemoinformatics. 2014.

TVAROŠKA, Igor, Stanislav KOZMON, Michaela WIMMEROVÁ and Jaroslav KOČA. A QM/MM Investigation of the Catalytic Mechanism of Metal-Ion-Independent Core 2 beta1,6-N-Acetylglucosaminyltransferase. Chemistry - A European Journal. Weinheim: WILEY-VCH Verlag, 2013, vol. 19, No 25, p. 8153-8162. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.201300383.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCI, Annabelle VARROT, Sheena KERR, Martina LAHMANN, Viviane BALLOY, John FAHY, Michel CHIGNARD, Anne IMBERTY and Michaela WIMMEROVÁ. A Soluble Fucose-Specific Lectin from Aspergillus fumigatus Conidia - Structure, Specificity and Possible Role in Fungal Pathogenicity. PLOS ONE. Public Library of Science, 2013, vol. 8, No 12, p. 1-15. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0083077.

KREPL, Miroslav, Kamila RÉBLOVÁ, Jaroslav KOČA and Jiří ŠPONER. Bioinformatics and Molecular Dynamics Simulation Study of L1 Stalk Non-Canonical rRNA Elements: Kink-turns, Loops, and Tetraloops. JOURNAL OF PHYSICAL CHEMISTRY B. Washington: American Chemical Society, 2013, vol. 117, No 18, p. 5540-5555. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/jp401482m.

VARGOVÁ, Veronika, Marko ŽIVANOVIĆ, Vlastimil DORCAK, Emil PALEČEK and Veronika OSTATNA. Catalysis of Hydrogen Evolution by Polylysine, Polyarginine and Polyhistidine at Mercury Electrodes. ELECTROANALYSIS. 2013. ISSN 1040-0397. Available from: https://dx.doi.org/10.1002/elan.201300170.

ŠVACHOVÁ, Veronika, David PAVLIŇÁK, Milan ALBERTI, Lucy VOJTOVÁ, Josef JANČÁŘ and Pavel HYRŠL. Electrospinning of biopolymers based on gelatin and oxidized cellulose. In 5th Central European Symposium on Plasma Chemistry. 2013. ISBN 978-615-5270-04-8.

BOUCHAL, Tomáš, Radka SVOBODOVÁ VAŘEKOVÁ, Tomáš RAČEK, Crina-Maria IONESCU, Stanislav GEIDL, Aleš KŘENEK and Jaroslav KOČA. Empirical charges for chemoinformatics applications. In GCC 2013 - 9th German Conference on Chemoinformatics. 2013. Available from: https://dx.doi.org/10.1186/1758-2946-6-S1-P60.

KUMARI, Manju, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Exploring the reaction mechanism for OGT glycosyltransferase using QM/MM molecular dynamics. In CPMD-Meeting 2013. 2013.

KŘÍŽ, Zdeněk, Jiří KLUSÁK, Zdena KRIŠTOFÍKOVÁ and Jaroslav KOČA. How Ionic Strength Affects the Conformational Behavior of Human and Rat Beta Amyloids – A Computational Study. PLoS One. San Francisco, CA, USA: Public Library of Science, 2013, vol. 8, No 5, p. "nestránkováno", 14 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0062914.

KOZMON, Stanislav, Radek MATUŠKA and Jaroslav KOČA. CH-pi Interaction between Carbohydrates and Aromatic Moieties: Electron Density Issue. In XI-Discussions in Structural Molecular Biology, Nové Hrady 2013. 2013.

EMMER, Jiří, Andrea VAVRINSKÁ, Vladimír SYCHROVSKÝ, Ladislav BENDA, Zdeněk KŘÍŽ, Jaroslav KOČA, Rolf BOELENS, Vladimír SKLENÁŘ and Lukáš TRANTÍREK. Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic N-15 chemical shielding anisotropy tensors. Journal of biomolecular NMR. Dordrecht: Springer, 2013, vol. 55, No 1, p. 59-70. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-012-9686-6.

WIMMEROVÁ, Michaela, Stanislav KOZMON, Josef HOUSER, Radek MATUŠKA and Jaroslav KOČA. Interactions of carbohydrates with biomolecules. Role of the CH/pi interactions. In 22nd International Symposium on Glycoconjugates (2013). 2013.

KOZMON, Stanislav, Michaela WIMMEROVÁ, Josef HOUSER, Radek MATUŠKA and Jaroslav KOČA. LECTIN – CARBOHYDRATE INTERACTIONS DRIVEN BY DISPERSION. In 17th European Carbohydrate Symposium (EUROCARB 17). 2013.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCI, Annabelle VARROT, Sheena C. KERR, Martina LAHMANN, Viviane BALLOY, John V. FAHY, Michel CHIGNARD, Anne IMBERTY and Michaela WIMMEROVÁ. Lectins of Aspergillus fumigatus - possible anchor for opportunistic fungal pathogen. In 26.kongres ČSSM. 2013. ISBN 978-80-260-4507-6.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Karel BERKA, Lukáš PRAVDA, Veronika NAVRÁTILOVÁ, Pavel BANÁŠ, Crina-Maria IONESCU, Michal OTYEPKA and Jaroslav KOČA. MOLE 2.0: advanced approach for analysis of biomacromolecular channels. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2013, vol. 5, No 39, p. "nestránkováno", 13 pp. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/1758-2946-5-39.

PRAVDA, Lukáš, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Karel BERKA, Michal OTYEPKA and Jaroslav KOČA. MOLE 2.0: Improved Approach for Analysis of Biomacromolecular Channels and Pores. In 21st Annual International Conference on Intelligent Systems for Molecular Biology and 12th European Conference on Computational Biology, Berlin, Germany. 2013.

ŠTĚPÁN, Jakub, Petr KULHÁNEK, Milan LENČO, Zora STŘELCOVÁ, Aleš KŘENEK and Jaroslav KOČA. Nemesis - a molecular modeling package. Online. In Uli Fechner. Journal of Cheminformatics 2013, 5(Suppl 1). Goslar (GER): Chemistry Central, 2013, p. 13-14. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/1758-2946-5-S1-P12.

SVOBODOVÁ VAŘEKOVÁ, Radka, Stanislav GEIDL, Crina-Maria IONESCU, Ondřej SKŘEHOTA, Tomáš BOUCHAL, David SEHNAL, Ruben A. ABAGYAN and Jaroslav KOČA. Predicting pKa values from EEM atomic charges. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2013, vol. 5, No 18, p. "nestránkováno", 15 pp. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/1758-2946-5-18.

GEIDL, Stanislav, Crina-Maria IONESCU, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. QM quality atomic charges for proteins. In GCC 2013 - 9th German Conference on Chemoinformatics. 2013. Available from: https://dx.doi.org/10.1186/1758-2946-6-S1-P61.

IONESCU, Crina-Maria, Stanislav GEIDL, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. Rapid Calculation of Accurate Atomic Charges for Proteins via the Electronegativity Equalization Method. Journal of Chemichal Information a Modeling. WASHINGTON: AMER CHEMICAL SOC, 2013, vol. 53, No 10, p. 2548-2558. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/ci400448n.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Reaction mechanism of retaining glycosyltransferases - a computational study. In Modeling Interactions in Biomolecules VI. 2013.

STADLBAUER, Petr, Miroslav KREPL, Thomas E. CHEATHAM, Jaroslav KOČA and Jiří ŠPONER. Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations. Nucleic Acids Research. Oxford, UK: Oxford Press, 2013, vol. 41, No 14, p. 7128-7143. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkt412.

HOUSER, Josef, Radek MATUŠKA, Stanislav KOZMON, Patric ROMANO, Jaroslav KOČA and Michaela WIMMEROVÁ. The power is in detail - Structural analysis of an Aleuria aurantia lectin mutant. In 11th Discussions in Structural Molecular Biology. 2013. ISSN 1211-5894.

KOMÁREK, Jan, Josef HOUSER, Marie POKORNÁ, Nikola KOSTLÁNOVÁ, Anne IMBERTY and Michaela WIMMEROVÁ. Aspergillus fumigatus lectin - a model system for the study of multivalent lectins. In Struktura a interakce biomolekul II. 2012.

IONESCU, Crina-Maria, Zuzana KLÍMOVÁ, David SEHNAL, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. BH3-ONLY PROTEINS - FROM STRUCTURE TO FUNCTION. In XXIII. biochemický sjezd České společnosti pro biochemii a molekulární biologii a Slovenské spoločnosti pre biochémiu a molekulárnu biológiu. 2012.

DUDOVÁ, Zdenka, Hana PIVOŇKOVÁ and Miroslav FOJTA. Cis-Diamminedichloroplatinum(II) as a Chemical Probe for Study of Guanine Substitution by 7-Deazaguanine in PCR Amplicons. In 45th Heyrovsky Discussion - Electrochemistry of Biopolymers and Bioactive Compounds. 2012. ISBN 978-80-87541-03-6.

MISHRA, Sushil Kumar, Lenka ADAMOVÁ, Jan ADAM, Michaela WIMMEROVÁ and Jaroslav KOČA. Comparison of docking software to predict sacharide binding - combination with in silico protein engineering. In The joint ASMB/SFG 2012 Meeting. 2012.

MISHRA, Sushil Kumar, Johan SUND, Johan AQVIST and Jaroslav KOČA. Computational prediction of monosaccharide binding free energies to lectins with linear interaction energy models. Journal of Computational Chemistry. Hoboken, USA: WILEY-BLACKWELL, 2012, vol. 33, No 29, p. 2340-2350. ISSN 0192-8651. Available from: https://dx.doi.org/10.1002/jcc.23081.

VYCHODILOVÁ, Zdenka, Hana PIVOŇKOVÁ and Miroslav FOJTA. Electrochemical analysis of PCR amplicons with incorporated 7-deazapurines. Brno: Mendelova univerzita v Brně, 2012, p. 34-36. ISBN 978-80-7375-618-5.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. Exploring the Nature of Carbohydrate-Aromatic Dispersion Interactions via Sophisticated Computational Chemistry Tools. In 4-th EUCheMS Chemistry Congress. 2012.

MISHRA, Sushil Kumar and Jaroslav KOČA. Free energy calculation in lectin/saccharide complexes. In International Symposium On Recent Trends in Bioinformatics, Systems Biology and Biomolecular Interactions. 2012.

RIEDL, J, P MENOVA, R POHL, Petr ORSÁG, Miroslav FOJTA and Michal HOCEK. GFP-like Fluorophores as DNA Labels for Studying DNA-Protein Interactions. Journal of Organic Chemistry. WASHINGTON: AMER CHEMICAL SOC, 2012, vol. 77, No 18, p. 8287-8293. ISSN 0022-3263. Available from: https://dx.doi.org/10.1021/jo301684b.

IONESCU, Crina-Maria, Radka SVOBODOVÁ VAŘEKOVÁ, Jochen HM PREHN, Heinrich J HUBER and Jaroslav KOČA. Charge Profile Analysis Reveals That Activation of Pro-apoptotic Regulators Bax and Bak Relies on Charge Transfer Mediated Allosteric Regulation. PLoS Computational Biology. San Francisco: PUBLIC LIBRARY SCIENCE, 2012, vol. 8, No 6, p. "nestránkováno", 11 pp. ISSN 1553-7358. Available from: https://dx.doi.org/10.1371/journal.pcbi.1002565.

MISHRA, Sushil Kumar, Gabriel DEMO, Jaroslav KOČA and Michaela WIMMEROVÁ. In Silico Engineering of Proteins that Recognize Small Molecules. In Prof. Pravin Kaumaya. Protein Engineering. Neuveden: InTech - Open Access Publisher, 2012, p. 307-344. ISBN 978-953-51-0037-9.

MISHRA, Sushil Kumar, Jan ADAM, Michaela WIMMEROVÁ and Jaroslav KOČA. In Silico Mutagenesis and Docking Study of Ralstonia solanacearum RSL Lectin: Performance of Docking Software To Predict Saccharide Binding. Journal of Chemical Information and Modeling. WASHINGTON: AMER CHEMICAL SOC, 2012, vol. 52, No 5, p. 1250-1261. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/ci200529n.

SOLIMAN, Namat Ali, Petr KULHÁNEK and Jaroslav KOČA. Influence of stereochemistry on proton transfer in protonated tripeptide models. Journal of Molecular Modeling. New York: Springer, 2012, vol. 18, No 3, p. 871-879. ISSN 1610-2940. Available from: https://dx.doi.org/10.1007/s00894-011-1116-2.

KRIŠTOFÍKOVÁ, Zdena, Zdeněk KŘÍŽ, Daniela ŘÍPOVÁ and Jaroslav KOČA. Interactions of Amyloid beta Peptide 1 - 40 and Cerebrosterol. Neurochemical Research. New York: Springer / Plenum Publishers, 2012, vol. 37, No 3, p. 604-613. ISSN 0364-3190. Available from: https://dx.doi.org/10.1007/s11064-011-0650-8.

RIEDL, J, R POHL, NP ERNSTING, Petr ORSÁG, Miroslav FOJTA and Michal HOCEK. Labelling of nucleosides and oligonucleotides by solvatochromic 4-aminophthalimide fluorophore for studying DNA-protein interactions. CHEMICAL SCIENCE. Cambridge: ROYAL SOC CHEMISTRY, 2012, vol. 3, No 9, p. 2797-2806. ISSN 2041-6520. Available from: https://dx.doi.org/10.1039/c2sc20404e.

BERKA, Karel, Ondřej HANÁK, David SEHNAL, Pavel BANÁŠ, Veronika NAVRÁTILOVÁ, Deepti JAISWAL, Crina-Maria IONESCU, Radka SVOBODOVÁ VAŘEKOVÁ, Jaroslav KOČA and Michal OTYEPKA. MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels. Nucleic Acids Research. Oxford, UK: Oxford Press, 2012, vol. 40, W1, p. "W222"–"W227", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gks363.

GEIDL, Stanislav, Radka SVOBODOVÁ VAŘEKOVÁ, Crina-Maria IONESCU, Ondřej SKŘEHOTA, Tomáš BOUCHAL, Michal KUDERA, David SEHNAL, Abagyan RUBEN and Jaroslav KOČA. Predicting pKa values of substituted phenols by QSPR models which employ EEM atomic charges. In 3rd Strasbourg Summer School in Chemoinformatics. 2012.

GEIDL, Stanislav, Roman BERÁNEK, Radka SVOBODOVÁ VAŘEKOVÁ, Tomáš BOUCHAL and Jaroslav KOČA. Predikce pKa pro nově navržené molekuly léků. In ENBIK - Národní bioinformatická konference. 2012. ISBN 978-80-7080-818-4.

JANČAŘÍKOVÁ, Gita, Nikola KOSTLÁNOVÁ and Michaela WIMMEROVÁ. Problematic glycosyltransferase Rv3782 from Mycobacterium tuberculosis and its production in new expression system. In Struktura a interakce biomolekul II. 2012.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCI, Anne IMBERTY and Michaela WIMMEROVÁ. Protein oligomerization in Aleuria aurantia lectin family - importance and difficulties. Materials Structure in Chemistry, Biology, Physics and Technology. Praha: Czech and Slovak Crystallographic Association, 2012, vol. 19, No 1, p. 20-21. ISSN 1211-5894.

IONESCU, Crina-Maria, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. Protein Politics: How Neutral is Neutral? In X Girona Seminar on Theoretical and Computational Chemistry for the Modeling of Biochemical Systems From Theory to Applications. 2012.

IONESCU, Crina-Maria, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. Quantum Mechanical Evaluation of Charge Transfer inside Proteins. In 3rd Strasbourg Summer School in Chemoinformatics. 2012.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Quantum-chemical insight into the reaction mechanism of polypeptide UDP-GalNAc transferase 2, a retaining glycosyltransferase. In X Discussions in Structural Molecular Biology. 2012. ISSN 1211-5894.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. Quantum-chemical study of the reaction mechanism of polypeptide UDP-GalNAc transferase 2, a retaining glycosyltransferase. In 4th EuCheMS Chemistry Congress. 2012. ISSN 1213-7103.

KREPL, Miroslav, Marie ZGARBOVA, Petr STADLBAUER, Michal OTYEPKA, Pavel BANÁŠ, Jaroslav KOČA, Thomas E. CHEATHAM, Petr JURECKA and Jiří ŠPONER. Reference Simulations of Noncanonical Nucleic Acids with Different chi Variants of the AMBER Force Field: Quadruplex DNA, Quadruplex RNA, and Z-DNA. Journal of Chemical Theory and Computation. WASHINGTON: AMER CHEMICAL SOC, 2012, vol. 8, No 7, p. 2506-2520. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/ct300275s.

IONESCU, Crina-Maria, Radka SVOBODOVÁ VAŘEKOVÁ, Heinrich J HUBER and Jaroslav KOČA. ROLE OF CHARGE TRANSFER IN THE ACTIVATION OF PRO-APOPTOTIC REGULATORS BAX AND BAK. In XXIII. biochemický sjezd České společnosti pro biochemii a molekulární biologii a Slovenské spoločnosti pre biochémiu a molekulárnu biológiu. 2012.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Heinrich J. HUBER, Stanislav GEIDL, Crina-Maria IONESCU, Michaela WIMMEROVÁ and Jaroslav KOČA. SiteBinder: An improved approach for comparing multiple protein structural motifs. Journal of Chemical Information and Modeling. 2012, vol. 52, No 2, p. 343–359. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/ci200444d.

WIMMEROVÁ, Michaela, Stanislav KOZMON, Ivona NEČASOVÁ, Sushil Kumar MISHRA, Jan KOMÁREK and Jaroslav KOČA. Stacking Interactions between Carbohydrate and Protein Quantified by Combination of Theoretical and Experimental Methods. Plos One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2012, vol. 7, No 10, p. "nestránkováno", 9 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0046032.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. STUDY OF THE ADDITIVE PROPERTIES OF THE CARBOHYDRATE AROMATIC CH-Pi INTERACTION BY THE DFT AND AB INITIO CALCULATIONS. In 26th International Carbohydrates Symposium. 2012.

TRNKA, Tomáš, Stanislav KOZMON, Igor TVAROŠKA and Jaroslav KOČA. STUDY OF THE PPGALNACT2 GLYCOSYLTRANSFERASE CATALYTIC MECHANISM BY QM/MM METHODS. In XXIII. biochemický sjezd. 2012.

TVAROŠKA, Igor, Stanislav KOZMON, Michaela WIMMEROVÁ and Jaroslav KOČA. Substrate Assisted Catalytic Mechanism of O GlcNAc Transferase Discovered by Quantum Mechanics/Molecular Mechanics Investigation. J. Am. Chem. Soc. Washington: American Chemical Society, 2012, vol. 134, No 37, p. 15563-15571. ISSN 0002-7863. Available from: https://dx.doi.org/10.1021/ja307040m.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. Theoretical Description of Carbohydrate-Aromatic CH-pi Interactions Additive Properties via DFT and Ab Initio Calculations. In X-Discussions in Structural Molecular Biology, Nové Hrady 2012. 2012.

KOZMON, Stanislav, Tomáš TRNKA, Igor TVAROŠKA and Jaroslav KOČA. Theoretical QM/MM Study of the inverting ppGalNAcT2 Glycosyltransferase Reaction Mechanism. In 8th International Symosium on Glycosyltransferases. 2012.

BOHUSLAVOVÁ, Olga, Petr SMILAUER and Josef ELSTER. Usnea lichen community biomass estimation on volcanic mesas, James Ross Island, Antarctica. Polar Biology. New York: Springer, 2012, vol. 35, No 10, p. 1563-1572. ISSN 0722-4060. Available from: https://dx.doi.org/10.1007/s00300-012-1197-0.

KOMÁREK, Jan, Josef HOUSER, Nikola KOSTLÁNOVÁ, Marie POKORNÁ, Anne IMBERTY and Michaela WIMMEROVÁ. Aspergillus fumigatus lectin – a new procedure for studying highly complex interactions of multivalent lectins with their ligands (Aspergillus fumigatus lectin – a new procedure for studying highly complex interactions of multivalent lectins with their ligands.). In YoungChem 2011. 2011. ISBN 978-83-61037-28-6.

WIESNER, Jiří and Jaroslav KOČA. Calculating pKa of selected active site aminoacids in acetylcholinesterase. In CECAM Worskhop: Dynamics and thermodynamics of biomolecular recognition. 2011.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings. In IX Discussions in Structural Molecular Biology, Nove Hrady. 2011.

LÁSKA, Kamil, Miloš BARTÁK, Josef HÁJEK, Pavel PROŠEK and Olga BOHUSLAVOVÁ. Climatic and ecological characteristics of deglaciated area of James Ross Island, Antarctica, with a special respect to vegetation cover. Czech Polar Reports. Brno: Masarykova univerzita, 2011, vol. 1, No 1, p. 49-62. ISSN 1805-0689.

SVOBODOVÁ VAŘEKOVÁ, Radka, David SEHNAL, Lukáš PRAVDA, Jan OPPELT, Crina-Maria IONESCU, Stanislav GEIDL and Jaroslav KOČA. Comparison of protein structural motifs – challenges and algorithms. Improved approach and case studies. In 9th International Conference on Chemical Structures, Noordwijkerhout, The Netherlands. 2011.

KADEŘÁVEK, Pavel, Carl DIEHL, Veronika PAPOUŠKOVÁ, Hana ŠANDEROVÁ, Petr PADRTA, Lukáš ŽÍDEK, Libor KRÁSNÝ, Vladimír SKLENÁŘ and Mikael AKKE. Complementation of 3D structure of delta subunit of RNA polymerase from Bacillus subtilis with description of internal motions in terms of reduced spectral density mapping. MATERIALS STRUCTURE. 2011, vol. 18, No 1, p. 3-5. ISSN 1211-5894.

STŘELCOVÁ, Zora, Jakub ŠTĚPÁN, Petr KULHÁNEK, Paolo CARLONI and Jaroslav KOČA. Computational study of the dimethylphosphate hydrolysis as the reference system for the understanding of the restriction endonucleases mechanism. In IX Discussions in Structural Molecular Biology, Nové Hrady. 2011.

KOZMON, Stanislav, Radek MATUŠKA, Vojtech SPIWOK and Jaroslav KOČA. Dispersion interactions of carbohydrates with condensate aromatic moieties: Theoretical study on the CH–pi interaction additive properties. Physical Chemistry Chemical Physics. Great Britain: ROYAL SOC CHEMISTRY, 2011, vol. 13, No 31, p. 14215-14222. ISSN 1463-9076. Available from: https://dx.doi.org/10.1039/c1cp21071h.

RYŠKA, Jan, Sushil Kumar MISHRA, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. Docking study of matrix metalloproteinase inhibitors. In 9th Discussions in Structural Molecular Biology, Nové Hrady, Czech Republic. 2011.

MISHRA, Sushil Kumar, Johan SUND, Johan AQVIST and Jaroslav KOČA. Fast and Accurate calculation of Lectin/Saccharide Binding Free Energy. In Innovative Approaches to Computational Drug Discovery, October 3-6, 2011, CECAM-HQ-EPFL, Lausanne, Switzerland. 2011.

IONESCU, Crina-Maria, Radka SVOBODOVÁ VAŘEKOVÁ, David SEHNAL, Ondřej SKŘEHOTA and Jaroslav KOČA. Fast methods of atomic charge calculation: the Electronegativity Equalization Method for proteins. (Fast methods of atomic charge calculation: the Electronegativity Equalization Method for proteins). In 9th International Conference on Chemical Structures, Noordwijkerhout, The Netherlands. 2011.

GEIDL, Stanislav, Roman BERÁNEK, Radka SVOBODOVÁ VAŘEKOVÁ, Tomáš BOUCHAL, Miroslav BRUMOVSKÝ, Michal KUDERA, Ondřej SKŘEHOTA and Jaroslav KOČA. How the methodology of 3D structure preparation influences the quality of QSPR models? In 7th German Conference on Chemoinformatics. 2011.

MISHRA, Sushil Kumar, Jan ALÁN, Petr KULHÁNEK and Jaroslav KOČA. How to calculate binding energy in Protein-Carbohydrate complexes. In 5th THEORETICAL BIOPHYSICS INTERNATIONAL SYMPOSIUM, Madeira (Portugal), 8 - 12 June 2011. 2011.

PLÁNKA, Ladislav, Robert SRNEC, Petr RAUŠER, David STARÝ, Jana JUHASOVA, Jiri KLIMA, Lucy VOJTOVÁ, Josef JANČÁŘ, Karel VESELÝ, Petr GÁL and Alois NEČAS. Mesenchymal Stem Cells in combination with chondrocytes in the treatment of deep articular surface defect. In SICOT 2011 XXV Triennial World Congress. Prague. 2011.

PEKAROVÁ, Michaela, Antonín LOJEK, Hana MARTIŠKOVÁ, Ondřej VAŠÍČEK, Lucia BINÓ, Anna KLINKE, Denise LAU, Radek KUCHTA, Jaroslav KADLEC, Radimír VRBA and Lukáš KUBALA. New role for L-arginine in regulation of inducible nitric-oxide-synthase-derived superoxide anion production in raw 264.7 macrophages. The Scientific World Journal. NY, USA, 2011, vol. 11, No 11, p. 2443-2457. ISSN 1537-744X. Available from: https://dx.doi.org/10.1100/2011/321979.

WIESNER, Jiří and Jaroslav KOČA. pKa Calculation for Selected Active Site Residues in Acetylcholinesterase. In Modeling Interactions in Biomolecules V. 2011. ISBN 978-80-7378-180-4.

KULHÁNEK, Petr, Letif MONES, Zora STŘELCOVÁ, Istvan SIMON, Monika FUXREITER and Jaroslav KOČA. PMFLib – A TOOLKIT FOR FREE ENERGY CALCULATIONS. In 8th Discussions in Structural Molecular Biology, Nové Hrady, Czech Republic. 2011.

KULHÁNEK, Petr, Letif MONES, Zora STŘELCOVÁ, Istvan SIMON, Monika FUXREITER and Jaroslav KOČA. PMFLib – A TOOLKIT FOR FREE ENERGY CALCULATIONS II. In Modeling Interactions in Biomolecules V, Kutná Hora, Czech Republic. 2011.

GEIDL, Stanislav, Radka SVOBODOVÁ VAŘEKOVÁ, Ondřej SKŘEHOTA, Michal KUDERA, Crina-Maria IONESCU, David SEHNAL, Tomáš BOUCHAL and Jaroslav KOČA. Predicting pKa values of substituted phenols from atomic charges. In 9th Discussions in Structural Molecular Biology, Nové Hrady, Czech Republic. 2011.

SVOBODOVÁ VAŘEKOVÁ, Radka, Stanislav GEIDL, Crina-Maria IONESCU, Ondřej SKŘEHOTA, Michal KUDERA, David SEHNAL, Tomáš BOUCHAL, Ruben A. ABAGYAN, Heinrich J. HUBER and Jaroslav KOČA. Predicting pK(a) values of substituted phenols from atomic charges: Comparison of different quantum mechanical methods and charge distribution schemes. Journal of Chemical Information and Modeling. 2011, vol. 51, No 8, p. 1795-1806. ISSN 1549-9596.

POKORNÁ, Martina, Jan ADAM, Charles SABIN, Edward P. MITCHELL, Anne IMBERTY, Jaroslav KOČA and Michaela WIMMEROVÁ. Production of Ca-dependent high-affinity lectins with defined specificity by mutagenesis of PA-IIL lectin. In European Young Investigator Workshop, Carbohydrate Chemistry: From Synthesis to Applications. 2011.

SKŘEHOTA, Ondřej, Radka SVOBODOVÁ VAŘEKOVÁ, Stanislav GEIDL, Crina-Maria IONESCU, Žídek JAN and Jaroslav KOČA. QSPR Designer – Employ your own descriptors in the automated QSAR modeling process. In 7th German Conference on Chemoinformatics. 2011.

SKŘEHOTA, Ondřej, Radka SVOBODOVÁ VAŘEKOVÁ, Stanislav GEIDL, Michal KUDERA, David SEHNAL, Crina-Maria IONESCU, Tomáš BOUCHAL and Jaroslav KOČA. QSPR modeling – algorithms, challenges and IT solutions. In 9th Discussions in Structural Molecular Biology, Nové Hrady, Czech Republic. 2011.

ŠTĚPÁN, Jakub, Zora STŘELCOVÁ, Petr KULHÁNEK and Jaroslav KOČA. Reaction Mechanism of MutH Enzyme - Quantum Mechanics/Molecular Mechanics Study 2. In XV. Setkání biochemiků a molekulárních biologů. 2011. ISBN 978-80-210-5594-0.

VÁCHA, Robert, F.J. MARTINEZ-VERACOECHEA and D. FRENKEL. Receptor-Mediated Endocytosis of Nanoparticles of Various Shapes. Nano Lett. American Chemical Society, 2011, vol. 11, No 12, p. 5391–5395. ISSN 1530-6984. Available from: https://dx.doi.org/10.1021/nl2030213.

VÁCHA, Robert and D FRENKEL. Relation between Molecular Shape and the Morphology of Self-Assembling Aggregates: A Simulation Study. Biophysical Journal. Bethesda, USA: Biophysical Society, 2011, vol. 101, No 6, p. 1432-1439. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2011.07.046.

JAISWAL, Deepti, Radka SVOBODOVÁ VAŘEKOVÁ, Crina-Maria IONESCU, David SEHNAL and Jaroslav KOČA. Searching for tunnels of proteins - comparison of approaches and available software tools. In 7th German Conference on Chemoinformatics. 2011.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Heinrich J. HUBER, Stanislav GEIDL, Crina-Maria IONESCU, Michaela WIMMEROVÁ and Jaroslav KOČA. SiteBinder – an improved approach for comparing multiple protein structural motifs. Case studies on biologically important motifs. In 7th German Conference on Chemoinformatics. 2011.

SEHNAL, David, Radka SVOBODOVÁ VAŘEKOVÁ, Heinrich J. HUBER, Stanislav GEIDL, Crina-Maria IONESCU, Michaela WIMMEROVÁ and Jaroslav KOČA. SiteBinder – an improved software superimposing multiple protein structural motifs and its applications. In XV. Meeting of Biochemists and Molecular Biologists. 2011. ISBN 978-80-210-5594-0.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCI, Anne IMBERTY and Michaela WIMMEROVÁ. Structure and specificity of a blood group oligosaccharide specific lectin from Aspergillus fumigatus. In 16th European Carbohydrate Symposium. 2011.

KŘÍŽ, Zdeněk, Zdena KRIŠTOFÍKOVÁ and Jaroslav KOČA. Study of interactions of 24(S,R)-hydroxycholesterols with 1-42 amyloid beta using molecular modeling methods. In The 10th International Conference on Alzheimer´s and Parkinson´s diseases AD/PD 2011. 2011.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. STUDY OF THE CARBOHYDRATE CH/pi INTERACTIONS FAVOURABLE REGIONS IN THE CARBOHYDRATE SURROUNDINGS. In Conformational Analysis of Carbohydrates & Protein/Carbohydrate Interactions (CAC-PCI), Naples. 2011.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. Systematic Study of Carbohydrate-Aromatic CH-pi Dispersion Interaction by DFT and Highly Correlated Ab Initio Methods. In Modeling Interactions In Biomolecules 2011, Kutna Hora. 2011.

VÁCHA, Robert, S W RICK, P JUNGWIRTH, A G F DE BEER, H B DE AGUIAR, J S SAMSON and S ROKE. The Orientation and Charge of Water at the Hydrophobic Oil Droplet-Water Interface. Journal of the American Chemical Society. Washington, DC., USA: American Chemical Society, 2011, vol. 133, No 26, p. 10204-10210. ISSN 0002-7863. Available from: https://dx.doi.org/10.1021/ja202081x.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. THEORETICAL INVESTIGATION OF THE CARBOHYDRATE CH/pi INTERACTIONS FAVOURABLE REGIONS IN THE CARBOHYDRATE SURROUNDINGS. In 16th European Carbohydrate Symposium (EUROCARB 16); Sorrento. 2011.

KOZMON, Stanislav, Radek MATUŠKA, Vojtěch SPIWOK and Jaroslav KOČA. THEORETICAL STUDY OF THE CARBOHYDRATES DISPERSION INTERACTIONS WITH CONDENSED AROMATIC MOIETIES. In 12th Bratislava Symposium on Saccharides, Smolenice. 2011.

ALÁN, Jan, Eva DEJMKOVÁ, Petr KULHÁNEK, Jaroslav KOČA and Michaela WIMMEROVÁ. Thermodynamics behind CV-IIL binding of saccharides. In 16th European Carbohydrates Symposium. 2011. ISBN 978-88-900948-8-0.

KOZMON, Stanislav, Radek MATUŠKA, Vojtech SPIWOK and Jaroslav KOČA. Three-Dimensional Potential Energy Surface of Selected Carbohydrates' CH/p Dispersion Interactions Calculated by High-Level Quantum Mechanical Methods. Chemistry - A European Journal. Weinheim: WILEY-VCH Verlag, 2011, vol. 17, No 20, p. 5680-5690. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.201002876.

KULHÁNEK, Petr, Jan ALÁN and Jaroslav KOČA. Virtual screening and in silico design of novel inhibitors of bacterial lectins. In Modeling Interactions in Biomolecules V, Kutná Hora, Czech Republic. 2011.

ALÁN, Jan, Petr KULHÁNEK and Jaroslav KOČA. Virtual screening and in sillico design of novel inhibitors of bacterial lectins. In XV. Setkání biochemiků a molekulárních biologů. 2011. ISBN 978-80-210-5549-0.

OPPELT, Jan, Boris TICHÝ, Marek MRÁZ, Radka SVOBODOVÁ VAŘEKOVÁ and Jaroslav KOČA. Zpracování dat z vysoce výkonných sekvenátorů (Data processing of high-throughput sequencers). In Studentská vědecká konference PřF OU. 2011. ISBN 978-80-7368-908-7.

NOVÁČEK, Jiří, Anna ZAWADZKA-KAZIMIERCZUK, Veronika PAPOUŠKOVÁ, Lukáš ŽÍDEK, Hana ŠANDEROVÁ, Libor KRÁSNÝ, Wiktor KOZMINSKI and Vladimír SKLENÁŘ. 5D 13C-detected experiments for backbone assignment of unstructured proteins with a very low signal dispersion. Journal of Biomolecular NMR. Dordrecht: Springer Netherlands, 2011, vol. 50, No 1, p. 1-11. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-011-9496-2.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCI, Anne IMBERTY and Michaela WIMMEROVÁ. Aspergillus fumigatus as a pathogen - role of surface interacting molecules. In 25.kongres ČSSM. 2010.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCCI, Anne IMBERTY and Michaela WIMMEROVÁ. Aspergillus fumigatus lectins - how to stay in touch (Aspergillus fumigatus lectins - how to stay in touch). In XIV.Setkání biochemiků a molekulárních biologů. 2010. ISBN 978-80-210-5164-5.

ŠULÁK, Ondřej, Lenka MALINOVSKÁ, Gianluca CIOCI, Josef HOUSER, Nikola KOSTLÁNOVÁ, Emilie LAMEIGNERE, Martina POKORNÁ, Anne IMBERTY and Michaela WIMMEROVÁ. High-affinity lectins from pathogens: the potential targets for antiadhesive drug design. Materials Structure in Chemistry, Biology, Physics and Technology. Czech Republic: Czech and Slovak Crystallographic Associ, 2010, vol. 17, 1a, p. b30, 2 pp. ISSN 1211-5894.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCCI, Anne IMBERTY and Michaela WIMMEROVÁ. Novel lectins from Aspergillus fumigatus. In Struktura a interakce biomolekul. 2010.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCCI, Anne IMBERTY and Michaela WIMMEROVÁ. Proteiny Aspergillus fumigatus zapojené do interakce s hostitelem (Proteins of Aspergillus fumigatus involved in host-interaction). Chemické listy. Česká společnost chemická, 2010, vol. 104, No 5, p. 368-369. ISSN 1213-7103.

HOUSER, Josef, Jan KOMÁREK, Nikola KOSTLÁNOVÁ, Gianluca CIOCCI, Anne IMBERTY and Michaela WIMMEROVÁ. Structure and functional approaches revealing the mysteries of Aspergillus fumigatus host-interacting proteins. In Hercules XX symposium. 2010.

ĎURECH, Michal, Jan ADAM, Zdeněk KŘÍŽ, Nikola KOSTLÁNOVÁ, Jaroslav KOČA and Michaela WIMMEROVÁ. Molecular modelling studies of Ralstonia solanacearum lectin RS20L. In Cukrblik 2009. Brno: Masarykova Univerzita, 2009, p. 23. ISBN 978-80-210-4831-7.

ĎURECH, Michal, Jan ADAM, Zdeněk KŘÍŽ, Nikola KOSTLÁNOVÁ, Jaroslav KOČA and Michaela WIMMEROVÁ. Revealing the mysteries of the RS20L lectin from Ralstonia solanacearum ; a molecular modelling study. In XIII. Setkání biochemiků a molekulárních biologů. Brno: Masarykova Univerzita, 2009, p. 109. ISBN 978-80-210-4830-0.

KOMÁREK, Jan, Nikola KOSTLÁNOVÁ, Annabelle VARROT, Anne IMBERTY and Michaela WIMMEROVÁ. Structural and functional characterization of lectin AFL1 from Aspergillus fumigatus. In XIII. Setkání biochemiků a molekulárních biologů. Brno: Masarykova univerzita, 2009, p. 69-70. ISBN 978-80-210-4830-0.

ŠULÁK, Ondřej, Monia DELIA, Nikola KOSTLÁNOVÁ, Anne IMBERTY and Michaela WIMMEROVÁ. CHARACTERISATION OF A NEW LECTIN BCLC FROM THE HUMAN OPPORTUNISTIC PATHOGEN BURKHOLDERIA CENOCEPACIA. In XII. Setkání biochemiků a molekulárních biologů. Brno: Masarykova univerzita, 2008, p. 53-54. ISBN 978-80-210-4526-2.

ŠULÁK, Ondřej, Monia DELIA, Lenka MALINOVSKÁ, Nikola KOSTLÁNOVÁ, Anne IMBERTY and Michaela WIMMEROVÁ. Lectin BclC from the bacterium Burkholderia cenocepacia, molecular interactions based study. In 23rd International Lectin Meeting Interlec-23. Edinburgh: S.Alison Kilpatrick, 2008, p. 47.

KOSTLÁNOVÁ, Nikola, Dana SVOBODOVÁ and Michaela WIMMEROVÁ. USING DIFFERENT APPROACHES IN PREPARATION OF PUTATIVE MYCOBACTERIAL GLYCOSYLTRANSFERASES RV3782 AND RV0225 FOR CRYSTALLOGRAPHIC STUDIES. In FEBS Journal Volume 275 Supplement 1. 2008th ed. Oxford (UK): Blackwell Publishing Ltd., 2008, p. 169. ISSN 1742-464X.

ŠULÁK, Ondřej, Nikola KOSTLÁNOVÁ, Edvard MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Galectin-like protein from Ralstonia solanacearum. In Current chemistry and biochemistry of saccharides - Cukrblik 2007. Praha: Czech Academy of Sciences, 2007, p. 46-95.

ŠULÁK, Ondřej, Nikola KOSTLÁNOVÁ, Jan ADAM, Edward MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Interesting behaviour of sugar-binding protein from phytopathogen Rasltonia solanacearum. In Konference Grantové Agentury České republiky. Brno: Masarykova univerzita, 2007, p. 28-77.

ŠULÁK, Ondřej, Nikola KOSTLÁNOVÁ, Jan ADAM, Edward MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Nahlédnutí do struktury a funkce lektinu RS20L z bakteriálního fytopatogenu Ralstonia solanacearum (Structure and function of the lectin RS20L from bacterial pathogen Ralstonia solanacearum). In Chem. Listy 101, 425–465 (2007) - VII. Mezioborové setkání mladých biologů, biochemiků a chemiků. Chem. Listy 101, 425–465 (2007): Sigma - Aldrich, 2007, p. 458-459, 41 pp.

ŠULÁK, Ondřej, Nikola KOSTLÁNOVÁ, Jan ADAM, Edward MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. New approaches to structure and function studies of RS20L lectin from Ralstonia solanacearum. In Materials Structure, vol. 14, no. 1 (2007), 6th Discussions in Structural Molecular Biology. Nové Hrady, Czech Republic: Academic and University Center, Nové Hrady, 2007, p. 23-34, 30 pp.

ŠULÁK, Ondřej, Nikola KOSTLÁNOVÁ, Jan ADAM, Edward MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. New approaches to structure and function studies of RS20L lectin from Ralstonia solanacearum. In 14th European Carbohydrate Symposium, EUROCARB 14. Lubeck (Germany): Research Center Borstel and the Institute of Chemistry, 2007, p. 147-296.

KOSTLÁNOVÁ, Nikola, Anne IMBERTY and Michaela WIMMEROVÁ. Preparation of putative mycobacterial glycosyltransferases for crystallographic studies. In 14th European Carbohydrate Symposium. 2007.

KOSTLÁNOVÁ, Nikola, Edward MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Structural basis of six bladed beta propeller lectins AAL and RSL. In Materials and Structure in Chemistry, Biology,Physics and Technology. Neuvedeno: Neuvedeno, 2007, p. 1.

POKORNÁ, Martina, Gianluca CIOCCI, Stephanie PERRET, Etienne REBUFFET, Nikola KOSTLÁNOVÁ, Jan ADAM, Nechama GILBOA-GARBER, Edward P. MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Unusual Entropy Driven Affinity of Chromobacterium violaceum Lectin CV-IIL towards Fucose and Mannose. Biochemistry. USA: American Chemical Society, 2006, vol. 45, No 24, p. 7501-7510. ISSN 0006-2960.

POKORNÁ, Martina, Gianluca CIOCI, Stephanie PERRET, Etienne REBUFFET, Nikola KOSTLÁNOVÁ, Jan ADAM, Nechama GILBOA-GARBER, Edward P. MITCHELL, Anne IMBERTY and Michaela WIMMEROVÁ. Unusual Entropy-Driven Affinity of Chromobacterium violaceum Lectin CV-IIL Towards Fucose and Mannose. Biochemistry. 2006, vol. 45, No 24, p. 7501-7510. ISSN 0006-2960.

KOSTLÁNOVÁ, Nikola, Edward MITCHELL, Nechama GILBOA-GARBER, Michaela WIMMEROVÁ and Anne IMBERTY. Insight into structure-function relationship of Ralstonia solanacearum lectins RSL, RS-IIL, RS20L. In Materials and Structure in Chemistry, Biology, Physics and Technology. ARS Print, Praha: Krystalografická společnost, R. Kužel, 2005, p. 148-148.

KOSTLÁNOVÁ, Nikola, Edward MITCHELL, Jean GAGNON, Nechama GILBOA-GARBER, Anne IMBERTY and Michaela WIMMEROVÁ. Structural-functional analysis of lectins from pathogen bacteria Ralstonia solanacearum. In Chemicke listy. Praha: Czech chemical Society, 2005, p. 367-367.

KOSTLÁNOVÁ, Nikola, Edward MITCHELL, Hugues LORTAT-JACOB, Stefan OSCARSON, Martina LAHMANN, Nechama GILBOA-GARBER, Gerard CHAMBAT, Michaela WIMMEROVÁ and Anne IMBERTY. The fucose-binding lectin from Ralstonia solanacearum: a new type of beta-propeller architecture formed by oligomerisation and interacting with fucoside, fucosyllactose and plant xyloglucan (The fucose-binding lectin from ralstonia solanacearum: a new type of beta-propeller architecture formed by oligomerisation and interacting with fucoside, fucosyllactose and plant xyloglucan). Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2005, vol. 280, No 30, p. 27839-27849. ISSN 0021-9258.