Publication Records

HRADISKÁ, Helena, Martin KUREČKA, Jan BERÁNEK, Guglielmo TEDESCHI, Vladimír VIŠŇOVSKÝ, Aleš KŘENEK and Vojtěch SPIWOK. Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics. The Journal of Physical Chemistry B. 2024. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.3c05669.

JEANSON, Francis, Spencer J GIBSON, Pinar ALPER, Alexander BERNIER, J Patrick WOOLLEY, Daniel MIETCHEN, Andrzej STRUG, Regina BECKER, Pim KAMERLING, Maria del Carmen Sanchez GONZALEZ, Nancy MAH, Ann NOVAKOWSKI, Mark D WILKINSON, Oussama Mohammed BENHAMED, Annalisa LANDI, Georg Philip KROG, Heimo MÜLLER, Umar RIAZ, Colin VEAL, Petr HOLUB, Esther VAN ENCKEVORT and Anthony J BROOKES. Getting your DUCs in a row - standardising the representation of Digital Use Conditions. SCIENTIFIC DATA. London: NATURE PORTFOLIO, 2024, vol. 11, No 1, p. 1-10. ISSN 2052-4463. Available from: https://dx.doi.org/10.1038/s41597-024-03280-6.

HOLUB, Petr. Leveraging BBMRI-ERIC for XAI Research in Digital Pathology. In 20th European Congress on Digital Pathology 2024 (ECDP2024). 2024.

WITTNER, Rudolf, Petr HOLUB, Cecilia MASCIA, Francesca FREXIA, Heimo MÜLLER, Markus PLASS, Clare ALLOCCA, Fay BETSOU, Tony BURDETT, Ibon CANCIO, Adriane CHAPMAN, Martin CHAPMAN, Mélanie COURTOT, Vasa CURCIN, Johann EDER, Mark ELLIOT, Katrina EXTER, Carole GOBLE, Martin GOLEBIEWSKI, Bron KISLER, Andreas KREMER, Simone LEO, Sheng LIN-GIBSON, Anna MARSANO, Marco MATTAVELLI, Josh MOORE, Hiroki NAKAE, Isabelle PERSEIL, Ayat SALMAN, James SLUKA, Stian SOILAND-REYES, Caterina STRAMBIO-DE-CASTILLIA, Michael SUSSMAN, Jason R SWEDLOW, Kurt ZATLOUKAL and Jörg GEIGER. Toward a common standard for data and specimen provenance in life sciences. LEARNING HEALTH SYSTEMS. UNITED STATES: WILEY, 2024, vol. 8, No 1, p. 1-9. ISSN 2379-6146. Available from: https://dx.doi.org/10.1002/lrh2.10365.

DAUBNER, Lukáš, Raimundas MATULEVICIUS, Barbora BÜHNOVÁ, Matej ANTOL, Michal RŮŽIČKA and Tomáš PITNER. A Case Study on the Impact of Forensic-Ready Information Systems on the Security Posture. Online. In Advanced Information Systems Engineering. Cham: Springer Nature Switzerland, 2023, p. 522-538. ISBN 978-3-031-34559-3. Available from: https://dx.doi.org/10.1007/978-3-031-34560-9_31.

CALATRAVA, Amanda, Hernán ASOREY, Jan ASTALOS, Alberto AZEVEDO, Francesco BENINCASA, Ignacio BLANQUER, Martin BOBAK, Francisco BRASILEIRO, Laia CODÓ, Laura del CANO, Borja ESTEBAN, Meritxell FERRET, Josef HANDL, Tobias KERZENMACHER, Valentin KOZLOV, Aleš KŘENEK, Ricardo MARTINS, Manuel PAVESIO, Antonio Juan RUBIO-MONTERO and Juan SÁNCHEZ-FERRERO. A survey of the European Open Science Cloud services for expanding the capacity and capabilities of multidisciplinary scientific applications. COMPUTER SCIENCE REVIEW. NETHERLANDS: ELSEVIER, 2023, vol. 49. ISSN 1574-0137. Available from: https://dx.doi.org/10.1016/j.cosrev.2023.100571.

HOLZINGER, Andreas, Katharina KEIBLINGER, Petr HOLUB, Kurt ZATLOUKAL and Heimo MÜLLER. AI for Life: Trends in Artificial Intelligence for Biotechnology. NEW BIOTECHNOLOGY. NETHERLANDS: ELSEVIER, 2023, vol. 74, No 1, p. 16-24. ISSN 1871-6784. Available from: https://dx.doi.org/10.1016/j.nbt.2023.02.001.

LAMOTHE, Lucie, Jennifer R B JENSEN, Hans IENASESCU, Ove J R GUSTAFSSON, Alban GAIGNARD, Dmitry REPCHEVSKY, Radka SVOBODOVÁ, Tomáš RAČEK, Adrián ROŠINEC, Matej ANTOL and Hervé MÉNAGER. An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems. BioHackrXiv. 2023, p. 1-10. Available from: https://dx.doi.org/10.37044/osf.io/79kje.

DAVID, Romain, Arina RYBINA, Jean-Marie BUREL, Jean-Karim HERICHE, Pauline AUDERGON, Jan-Willem BOITEN, Frederik COPPENS, Sara CROCKETT, Exter KATRINA, Sven FAHRENER, Maddalena FRATELLI, Carole GOBLE, Philipp GORMANNS, Tobias GRANTNER, Bjorn GRUNING, Kim Tamara GURWITZ, John HANCOCK, Henriette HARMSE, Petr HOLUB, Nick JUTY, Geoffrey KARNBACH, Emma KAROUNE, Antje KEPPLER, Jessica KLEMEIER, Carla LANCELOTTI, Jean-Luc LEGRAS, L Allyson LISTER, Livio Longo DARIO, Rebecca LUDWIG, Benedicte MADON, Marzia MASSIMI, Vera MATSER, Rafaele MATTEONI, Michaela Th MAYRHOFER, Ohmann CHRISTIAN, Maria PANAGIOTOPOULOU, Helen PARKINSON, Isabelle PERSEIL, Claudia PFANDER, Roland PIERUSCHKA, Michael RAESS, Andreas RAUBER, Audrey S RICHARD, Paolo ROMANO, Antonio ROSATO, Alex SANCHEZ-PLA, Susanna-Assunta SANSONE, Ugis SARKANS, Beatriz SERRANO-SOLANO, Jing TANG, Ziaurrehman TANOLI, Jonathan TEDDS, Harald WAGENER, Martin WEISE, Hans V WESTERHOFF, Rudolf WITTNER, Jonathan EWBANK, Niklas BLOMBERG and Philip GRIBBON. "Be Sustainable Recommendations" for FAIR Resources in Life Sciences research: EOSC-Life's Lessons. EMBO Journal. 2023. ISSN 1460-2075.

ROŠINEC, Adrián and Klára MORAVCOVÁ. Beskar Cloud: OpenStack Deployment on Top of Kubernetes. In 12th Iberian Grid Conference. 2023.

MÜLLER, Heimo, Catarina LOPES-DIAS, Petr HOLUB, Markus PLASS, Emilian JUNGWIRTH, Robert REIHS, Paul R TORKE, Apostolos MALATRAS, Anouk BERGER, Heather COOMBS, Joakim DILLNER and Roxana MERINO-MARTINEZ. BIBBOX, a FAIR toolbox and App Store for Life Science Research. NEW BIOTECHNOLOGY. NETHERLANDS: ELSEVIER, 2023, vol. 77, p. 12-19. ISSN 1871-6784. Available from: https://dx.doi.org/10.1016/j.nbt.2023.06.001.

ROŠINEC, Adrián and Klára MORAVCOVÁ. Building OpenStack Cloud with Kubernetes as Undercloud. In EGI Conference 2023. 2023.

CAPANDOVÁ, Michaela, Veronika SEDLÁKOVÁ, Dáša BOHAČIAKOVÁ, Hana KOTASOVÁ, Vendula PELKOVÁ, Zbyněk VORÁČ, Matej ANTOL and Aleš HAMPL. By leaps and bounds: From in vitro lung tissue models to fostering collaboration in science. In The Annual PhD Conference in Biomedical Sciences. 2023.

BEURAN, Razvan, Jan VYKOPAL, Daniela BELAJOVÁ, Pavel ČELEDA, Yasuo TAN and Yoichi SHINODA. Capability Assessment Methodology and Comparative Analysis of Cybersecurity Training Platforms. Computers & Security. Elsevier, 2023, vol. 128, No 103120, p. 1-14. ISSN 0167-4048. Available from: https://dx.doi.org/10.1016/j.cose.2023.103120.

SVOBODA, Tomáš, Aleš KŘENEK, Łukasz OPIOŁA, Andrea MANZI and Josef HANDL. Cloudification of scientific experimental data using Onedata. In EGI Conference 2023. 2023.

HEJTMÁNEK, Lukáš, Adrián ROŠINEC and Sebastian LUNA-VALERO. Easy Deployment of Dask and Jupyter Notebooks on Managed Kubernetes. In EGI Conference 2023. 2023.

BRIONES DELGADO, Alan, Sara RICCI, Argyro CHATZOPOULOU, Jakub ČEGAN, Petr DZURENDA and Ioannis KOUTOUDIS. Enhancing Cybersecurity Education in Europe: The REWIRE's Course Selection Methodology. Online. In 979-8-4007-0772-8. 18TH INTERNATIONAL CONFERENCE ON AVAILABILITY, RELIABILITY & SECURITY, ARES 2023. Benevento, Italy: ACM, 2023, p. 1-15. ISBN 979-8-4007-0772-8. Available from: https://dx.doi.org/10.1145/3600160.3605091.

ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Aleš KŘENEK and Radka SVOBODOVÁ. Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management. In IBERGRID 2023. 2023.

ŠPAČEK, Stanislav, Petr VELAN, Martin HOLKOVIČ and Tomáš PLESNÍK. Event-Flow Correlation for Anomaly Detection in HTTP/3 Web Traffic. Online. In 2023 IEEE/IFIP Network Operations and Management Symposium (NOMS 2023). Miami, Florida, USA: IEEE Xplore Digital Library, 2023, p. 1-6. ISBN 978-1-6654-7716-1. Available from: https://dx.doi.org/10.1109/NOMS56928.2023.10154211.

ČERMÁK, Milan and Petr VELAN. How can network traffic lie? DFRWS EU 2023, 2023.

SCHINDLER, Ondřej, Karel BERKA, Alessio CANTARA, Aleš KŘENEK, Dominik TICHÝ, Tomáš RAČEK and Radka SVOBODOVÁ. αCharges: partial atomic charges for AlphaFold structures in high quality. Nucleic Acids Research. Oxford: Oxford University Press, 2023, vol. 51, W1, p. "W11"-"W16", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad349.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK, Libuše VODOVÁ and Tomáš STAUDEK. Integration of 3D printing technology into teaching in primary and secondary schools. Certified Methodology. Online. 1st ed. Brno: Masaryk University Press, 2023. odborné a technické vzdělávání. ISBN 978-80-280-0350-0.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK, Libuše VODOVÁ and Tomáš STAUDEK. Integration of 3D printing technology into teaching in primary and secondary schools. Certified Methodology. 2023.

SVOBODA, Tomáš, Radka SVOBODOVÁ, David ANTOŠ, Adrián ROŠINEC and Aleš KŘENEK. Introduction to Onedata at CEITEC MU and in Czech National Repository Platform. In MATECHat meeting. 2023.

SPIŠAKOVÁ, Viktória, Lukáš HEJTMÁNEK and Jakub HYNŠT. Nextflow in Bioinformatics: Executors Performance Comparison Using Genomics Data. FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE. NETHERLANDS: ELSEVIER, 2023, vol. 142, May 2023, p. 328-339. ISSN 0167-739X. Available from: https://dx.doi.org/10.1016/j.future.2023.01.009.

ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Josef HANDL, Jozef SABO, Aleš KŘENEK and Radka SVOBODOVÁ. Onedata4Sci: Life-science experimental datasets management system. In 3D-BioInfo | ISCB 3D-SIG | ELIXIR Czech Republic Structural Bioinformatics. 2023.

LAŠTOVIČKA, Martin, Martin HUSÁK, Petr VELAN, Tomáš JIRSÍK and Pavel ČELEDA. Passive Operating System Fingerprinting Revisited: Evaluation and Current Challenges. Computer Networks. Netherlands: Elsevier, 2023, vol. 229, No 109782, p. 1-12. ISSN 1389-1286. Available from: https://dx.doi.org/10.1016/j.comnet.2023.109782.

HOLUB, Petr, Heimo MÜLLER, Tomáš BÍL, Luca PIREDDU, Markus PLASS, Fabian PRASSER, Irene SCHLÜNDER, Kurt ZATLOUKAL, Rudolf NENUTIL and Tomáš BRÁZDIL. Privacy risks of whole-slide image sharing in digital pathology. Nature Communications. 2023, vol. 14, No 2577, p. 1-15. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-37991-y.

PLASS, Markus, Rudolf WITTNER, Petr HOLUB, Francesca FREXIA, Cecilia MASCIA, Matej GALLO, Heimo MÜLLER and Jörg GEIGER. Provenance of specimen and data – A prerequisite for AI development in computational pathology. NEW BIOTECHNOLOGY. NETHERLANDS: ELSEVIER, 2023, vol. 78, DEC, p. 22-28. ISSN 1871-6784. Available from: https://dx.doi.org/10.1016/j.nbt.2023.09.006.

ANTOL, Matej, Michal RŮŽIČKA, Luděk MATYSKA and Jiří MAREK. Public (Health) Sector and Academia. In Martin Komenda. Data-Driven Decision-Making in Medical Education and Healthcare. First edition. Brno: Masaryk University, 2023, p. 51-66. Data Rulezzzz! ISBN 978-80-280-0392-0.

SLANINÁKOVÁ, Terézia, Matej ANTOL, Jaroslav OĽHA, Vlastislav DOHNAL, Susana LADRA and Miguel A. MARTÍNEZ-PRIETO. Reproducible experiments with Learned Metric Index Framework. Information systems. Elsevier, 2023, vol. 118, No 1, p. 102255-102270. ISSN 0306-4379. Available from: https://dx.doi.org/10.1016/j.is.2023.102255.

GALLO, Matej, Vojtěch KRAJŇANSKÝ, Rudolf NENUTIL, Petr HOLUB and Tomáš BRÁZDIL. Shedding light on the black box of a neural network used to detect prostate cancer in whole slide images by occlusion-based explainability. NEW BIOTECHNOLOGY. NETHERLANDS: ELSEVIER, 2023, vol. 78, December, p. 52-67. ISSN 1871-6784. Available from: https://dx.doi.org/10.1016/j.nbt.2023.09.008.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Matej ANTOL, Jaroslav OĽHA and Vlastislav DOHNAL. SISAP 2023 Indexing Challenge – Learned Metric Index. In Pedreira, O., Estivill-Castro, V. Similarity Search and Applications. SISAP 2023. Lecture Notes in Computer Science, vol 14289. Cham: Springer, 2023, p. 282-290. ISBN 978-3-031-46993-0. Available from: https://dx.doi.org/10.1007/978-3-031-46994-7_24.

DAVID, Romain, Audrey RICHARD, Claire CONNELLAN, Katharina LAUER, Maria Luisa CHIUSANO, Carole GOBLE, Martin HOUDE, Isabel KEMMER, Antje KEPPLER, Philippe LIEUTAUD, Christian OHMANN, Maria PANAGIOTOPOULOU, Sara Raza KHAN, Arina RYBINA, Stian SOILAND-REYES, Charlotte WIT, Rudolf WITTNER, Rafael Andrade BUONO, Sarah Arnaud MARSH, Pauline AUDERGON, Dylan BONFILS, Carazo JOSE-MARIA, Remi CHARREL, Frederik COPPENS, Wolfgang FECKE, Claudia FILIPPONE, Eva Garcia ALVAREZ, Sheraz GUL, Henning HERMJAKOB, Katja HERZOG, Petr HOLUB, Lukasz KOZERA, Allyson LISTER, José LÓPEZ-CORONADO, Bénédicte MADON, Kurt MAJCEN, William MARTIN, Wolfgang MÜLLER, Elli PAPADOPOULOU, Christine M.A. PRAT, Paolo ROMANO, Sansone SUSANNA-ASSUNTA, Gary SAUNDERS, Niklas BLOMBERG and Jonathan EWBANK. Umbrella Data Management Plans to Integrate FAIR Data: Lessons From the ISIDORe and BY-COVID Consortia for Pandemic Preparedness. Data Science Journal. Ubiquity Press, 2023. ISSN 1683-1470. Available from: https://dx.doi.org/10.5334/dsj-2023-035.

SPIŠAKOVÁ, Viktória, Dalibor KLUSÁČEK and Lukáš HEJTMÁNEK. Using Kubernetes in Academic Environment : Problems and Approaches. In Dalibor Klusáček, Julita Corbalán, Gonzalo P. Rodrigo. Job Scheduling Strategies for Parallel Processing. 1st ed. Cham (Switzerland): Springer, 2023, p. 235-253. ISBN 978-3-031-22697-7. Available from: https://dx.doi.org/10.1007/978-3-031-22698-4_12.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK, Libuše VODOVÁ and Petr VYBÍRAL. Výuková pomůcka - soubor výukových pomůcek pro integraci technologie 3D tisku do výuky na základních a středních školách (Teaching aid - a set of teaching aids for the integration of 3D printing technology into teaching at primary and secondary schools). Online. Brno: Masarykova univerzita, 2023.

KRAUS, Lydia, Valdemar ŠVÁBENSKÝ, Martin HORÁK, Václav MATYÁŠ, Jan VYKOPAL and Pavel ČELEDA. Want to Raise Cybersecurity Awareness? Start with Future IT Professionals. Online. In Proceedings of the 28th Annual ACM Conference on Innovation and Technology in Computer Science Education (ITiCSE'23). New York, NY, USA: ACM, 2023, p. 236-242. ISBN 979-8-4007-0138-2. Available from: https://dx.doi.org/10.1145/3587102.3588862.

HORÁK, Jiří, Katarína FURMANOVÁ, Barbora KOZLÍKOVÁ, Tomáš BRÁZDIL, Petr HOLUB, Martin KAČENGA, Matej GALLO, Rudolf NENUTIL, Jan BYŠKA and Vít RUSŇÁK. xOpat: eXplainable Open Pathology Analysis Tool. COMPUTER GRAPHICS FORUM. England: Wiley, 2023, vol. 42, No 3, p. 63-73. ISSN 0167-7055. Available from: https://dx.doi.org/10.1111/cgf.14812.

RAČEK, Tomáš. Zpracování dat na CEITECu. In SitSem - Seminář laboratoře Sitola. 2023.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK and Libuše VODOVÁ. 3D tisk a jeho uplatnění na základních a středních školách (3D printing and its application in primary and secondary schools). 2023.

SCHINDLER, Ondřej, Tomáš RAČEK and Radka SVOBODOVÁ. Alphacharges - a web service for calculating QM-like partial atomic charges for AlphaFold proteins. In XXI. setkání biochemiků a molekulárních biologů. 2022.

ČEGAN, Jakub, Tomáš PLESNÍK, Daniel TOVARŇÁK, Zdeněk FORMAN and Roman VESELÝ. Analytická studie rozvoje a nasazení SOC (Analytical study of SOC development and deployment). 2022.

PITNER, Tomáš, Otto DOSTÁL, Michal JAVORNÍK, Pavel ANDRES, Aleš ROČEK, Karel SLAVÍČEK, Tomáš KUBALA and Otto DOSTÁL. Analýza systému pro podporu efektivní spolupráce distribuovaných zdravotnických týmů (Analysis of a system to support effective collaboration of distributed healthcare teams). Brno: MU, 2022, 76 pp.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL, Pavel ČELEDA and Lydia KRAUS. Applications of Educational Data Mining and Learning Analytics on Data From Cybersecurity Training. Education and Information Technologies. Springer, 2022, vol. 27, No 9, p. 12179 - 12212. ISSN 1360-2357. Available from: https://dx.doi.org/10.1007/s10639-022-11093-6.

BRÁZDIL, Tomáš, Matej GALLO, Rudolf NENUTIL, Andrej KUBANDA, Martin TOUFAR and Petr HOLUB. Automated annotations of epithelial cells and stroma in hematoxylin–eosin-stained whole-slide images using cytokeratin re-staining. The Journal of Pathology: Clinical Research. 2022, vol. 8, No 2, p. 129-142. ISSN 2056-4538. Available from: https://dx.doi.org/10.1002/cjp2.249.

SVOBODA, Tomáš, Aleš KŘENEK and Josef HANDL. Automatic storing, sharing and archiving datasets with Onedata. In EGI Conference 2022. 2022.

SVOBODA, Tomáš, Aleš KŘENEK and Josef HANDL. Automating scientific dataset management and processing using Onedata. In IBERGRID 2022. 2022.

MIHÁLIKOVÁ, Ivana, Martin FRIÁK, Matej PIVOLUSKA, Martin PLESCH, Martin SAIP and Mojmír ŠOB. Best-Practice Aspects of Quantum-Computer Calculations: A Case Study of the Hydrogen Molecule. MOLECULES. SWITZERLAND: MDPI, 2022, vol. 27, No 3, p. 1-15. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules27030597.

SPIWOK, Vojtěch, Martin KUREČKA and Aleš KŘENEK. Collective Variable for Metadynamics Derived From AlphaFold Output. FRONTIERS IN MOLECULAR BIOSCIENCES. SWITZERLAND: FRONTIERS MEDIA SA, 2022, vol. 2022, No 9, p. 1-10. ISSN 2296-889X. Available from: https://dx.doi.org/10.3389/fmolb.2022.878133.

FIRC, Anton, Kamil MALINKA and Petr HANÁČEK. Creation and detection of malicious synthetic media - a preliminary survey on deepfakes. In Sborník příspevků z 54. konference EurOpen.CZ, 28.5.-1.6.2022. 2022, p. 125-145. ISBN 978-80-86583-34-1.

HUSÁK, Martin, Lukáš SADLEK, Stanislav ŠPAČEK, Martin LAŠTOVIČKA, Michal JAVORNÍK and Jana KOMÁRKOVÁ. CRUSOE: A Toolset for Cyber Situational Awareness and Decision Support in Incident Handling. Computers & Security. Elsevier, 2022, vol. 115, April, p. 1-19. ISSN 0167-4048. Available from: https://dx.doi.org/10.1016/j.cose.2022.102609.

SADLEK, Lukáš, Pavel ČELEDA and Daniel TOVARŇÁK. Current Challenges of Cyber Threat and Vulnerability Identification Using Public Enumerations. Online. In The 17th International Conference on Availability, Reliability and Security (ARES 2022). Vienna, Austria: ACM, 2022, p. 1-8. ISBN 978-1-4503-9670-7. Available from: https://dx.doi.org/10.1145/3538969.3544458.

MALINKA, Kamil. Deepfakes - zábava, nebo hrozba? In Aimtechackathon. 2022.

ŠEDA, Pavel, Jan VYKOPAL, Pavel ČELEDA and Igor IGNÁC. Designing Adaptive Cybersecurity Hands-on Training. Online. In 2022 IEEE Frontiers in Education Conference (FIE). Uppsala, Sweden: IEEE, 2022, p. 1-8. ISBN 978-1-6654-6244-0. Available from: https://dx.doi.org/10.1109/FIE56618.2022.9962663.

RUMAN, Ádám and Daniel KOUŘIL. Detection of Malicious Code in SSH programs. In Sborník příspěvků z 54. konference EurOpen.CZ. 2022, p. 115-124.

ČELEDA, Pavel, Attila FARKAS, Pavel ŠEDA, Andrej TOMČI, Daniel IĽKOVIČ, Martin ŠVÉDA and Tomáš HRADSKÝ. Dohledové centrum pro monitorování výrobních informačních systémů (Monitoring Center for Manufacturing Execution Systems). 2022.

HUJŇÁK, Ondřej, Kamil MALINKA and Petr HANÁČEK. E-Banking Authentication - Dynamic Password Generators and Hardware Tokens. In Sborník příspěvků z 54. konference EurOpen.CZ, 28.5.-1.6.2022. 2022, p. 211-221.

MALINKA, Kamil, Ondřej HUJŇÁK, Petr HANÁČEK and Lukáš HELLEBRANDT. E-Banking Security Study — 10 Years Later. IEEE Access. IEEE Xplore Digital Library, 2022, vol. 10, p. 16681-16699. ISSN 2169-3536. Available from: https://dx.doi.org/10.1109/ACCESS.2022.3149475.

MALINKA, Kamil, Libuše VODOVÁ, Martina JANČOVÁ, Lenka SOBKOVÁ and Vladimír SCHINDLER. Effective Teaching through Multidisciplinary Lessons Adopting 3D Print – Preliminary Study. Online. In Theo Bastiaens. Proceedings of EdMedia + Innovate Learning. United States: Association for the Advancement of Computing in Education (AACE), 2022, p. 286-291. ISBN 978-1-939797-62-9.

ŠPAČEK, Stanislav, Petr VELAN, Pavel ČELEDA and Daniel TOVARŇÁK. Encrypted Web Traffic Dataset: Event Logs and Packet Traces. Data in Brief. 2022, vol. 42, June, p. 1-10. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2022.108188.

ŠVÁBENSKÝ, Valdemar, Richard WEISS, Jack COOK, Jan VYKOPAL, Pavel ČELEDA, Jens MACHE, Radoslav CHUDOVSKÝ and Ankur CHATTOPADHYAY. Evaluating Two Approaches to Assessing Student Progress in Cybersecurity Exercises. Online. In Proceedings of the 53rd ACM Technical Symposium on Computer Science Education (SIGCSE '22). New York, NY, USA: ACM, 2022, p. 787-793. ISBN 978-1-4503-9070-5. Available from: https://dx.doi.org/10.1145/3478431.3499414.

MATYÁŠ, Václav, Kamil MALINKA, Lydia KRAUS, Lenka KNAPOVÁ and Agáta KRUŽÍKOVÁ. Even if users do not read security directives, their behavior is not so catastrophic. Communications of the ACM. New York, NY, USA: ACM, 2022, vol. 65, No 1, p. 37-40. ISSN 0001-0782. Available from: https://dx.doi.org/10.1145/3471928.

KYSELAK, Martin, Karel SLAVÍČEK, David GRENAR, Marek BOHRN and Jiri VAVRA. Fiber optic polarization temperature sensor for biomedical and military security systems. In SMART BIOMEDICAL AND PHYSIOLOGICAL SENSOR TECHNOLOGY XIX. 2022. ISSN 0277-786X. Available from: https://dx.doi.org/10.1117/12.2618911.

APPEL, Paul, Alexander J. HEILMAN, Ezekiel W. WERTZ, David W. LYONS, Marcus HUBER, Matej PIVOLUSKA and Giuseppe VITAGLIANO. Finite-Function-Encoding Quantum States. QUANTUM. WIEN: VEREIN FORDERUNG OPEN ACCESS PUBLIZIERENS QUANTENWISSENSCHAF, 2022, vol. 6, No 708, p. 1-34. ISSN 2521-327X. Available from: https://dx.doi.org/10.22331/q-2022-05-09-708.

HUSÁK, Martin, Martin LAŠTOVIČKA and Tomáš PLESNÍK. Handling Internet Activism during the Russian Invasion of Ukraine: A Campus Network Perspective. Digital Threats: Research and Practice. New York, NY, USA: ACM, 2022, vol. 3, No 3, p. "17:1-17:5", 5 pp. ISSN 2692-1626. Available from: https://dx.doi.org/10.1145/3534566.

ŠPAČEK, Stanislav, Petr VELAN, Pavel ČELEDA and Daniel TOVARŇÁK. HTTPS Event-Flow Correlation: Improving Situational Awareness in Encrypted Web Traffic. Online. In 2022 IEEE/IFIP Network Operations and Management Symposium (NOMS 2022). Budapešť, Maďarsko: IEEE Xplore Digital Library, 2022, p. 1-6. ISBN 978-1-6654-0601-7. Available from: https://dx.doi.org/10.1109/NOMS54207.2022.9789877.

SADLEK, Lukáš, Pavel ČELEDA and Daniel TOVARŇÁK. Identification of Attack Paths Using Kill Chain and Attack Graphs. Online. In NOMS 2022 - 2022 IEEE/IFIP Network Operations and Management Symposium. Budapest, Hungary: IEEE Xplore Digital Library, 2022, p. 1-6. ISBN 978-1-6654-0601-7. Available from: https://dx.doi.org/10.1109/NOMS54207.2022.9789803.

PIVOLUSKA, Matej and Martin PLESCH. Implementation of quantum compression on IBM quantum computers. Nature Scientific Reports. USA: NATURE PUBLISHING GROUP, 2022, vol. 12, No 1, p. 5841-5849. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-022-09881-8.

NĚMCOVÁ, Petra, Jana HOZZOVÁ and Jiří FILIPOVIČ. Improving ligand transport trajectory within flexible receptor in CaverDock. Online. In SAC '22: Proceedings of the 37th ACM/SIGAPP Symposium on Applied Computing. USA: Association for Computing Machinery, 2022, p. 619-626. ISBN 978-1-4503-8713-2. Available from: https://dx.doi.org/10.1145/3477314.3506988.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK and Libuše VODOVÁ. Integrace technologie 3D tisku do výuky na základních a středních školách. Ověřená metodika (Implementation of 3D printing technology into primary and secondary school education. Verified Methodology). Brno: Masarykova univerzita, 2022. ISBN 978-80-280-0279-4.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK, Libuše VODOVÁ and Tomáš STAUDEK. Integrace technologie 3D tisku do výuky na základních a středních školách. Ověřená metodika (Integration of 3D printing technology into teaching in primary and secondary schools. Certified Methodology). 2022.

DOSEDLA, Martin, Zdeněk HODIS, Martina JANČOVÁ, Jiří LEDVINKA, Leni LVOVSKÁ, Kamil MALINKA, Darina MÍSAŘOVÁ, Pavla PITNEROVÁ, Vladimír SCHINDLER, Vojtěch STANĚK, Libuše VODOVÁ and Tomáš STAUDEK. Integrace technologie 3D tisku do výuky na základních a středních školách. Ověřená metodika (Integration of 3D printing technology into teaching in primary and secondary schools. Certified Methodology). 2022.

DOSTÁL, Otto, Karel SLAVÍČEK, Vladimír SCHINDLER, Miloslav FILKA, David GRENAR, Martin KYSELÁK and Jiří VÁVRA. Kaskádní zapojení sady PM vláknových senzorů v DWDM rastru 50GHz. 2022.

TOVARŇÁK, Daniel, Martin HAMERNÍK and Vít RUSŇÁK. Kolaborativní prostředí pro členy bezpečnostních týmů (Collaborative environment for security team members). 2022.

DOSTÁL, Otto, Karel SLAVÍČEK, Aleš ROČEK, Martin KYSELÁK, Jiří VÁVRA, Jan MASCHKE, David GRENAR and Milan ČUCKA. Kombinovaná jednotka postavená na PM vláknovém senzoru a FGB (Combined unit based on PM fiber sensor and FGB). 2022.

OĽHA, Jaroslav, Terézia SLANINÁKOVÁ, Martin GENDIAR, Matej ANTOL and Vlastislav DOHNAL. Learned Indexing in Proteins: Extended Work on Substituting Complex Distance Calculations with Embedding and Clustering Techniques. arXiv, 2022. Available from: https://dx.doi.org/10.48550/ARXIV.2208.08910.

OĽHA, Jaroslav, Terézia SLANINÁKOVÁ, Martin GENDIAR, Matej ANTOL and Vlastislav DOHNAL. Learned Indexing in Proteins: Substituting Complex Distance Calculations with Embedding and Clustering Techniques. In Tomáš Skopal, Fabrizio Falchi, Jakub Lokoč, Maria Luisa Sapino, Ilaria Bartolini, Marco Patella. Similarity Search and Applications, 15th International Conference, SISAP 2022, Bologna, Italy, October 5–7, 2022, Proceedings. 1st ed. Cham: Springer Cham, 2022, p. 274-282. ISBN 978-3-031-17848-1. Available from: https://dx.doi.org/10.1007/978-3-031-17849-8_22.

SPIŠAKOVÁ, Viktória, Adrián ROŠINEC, Lukáš HEJTMÁNEK and Matej ANTOL. Managed Kubernetes — Next Gen Academic Infrastructure? In EGI Conference 2022. 2022.

VOSTOUPAL, Jakub, Pavel LOUTOCKÝ, Kamil MALINKA, František KASL, Anna BLECHOVÁ, Andrej KRIŠTOFÍK, Jan KLEINER, Lukáš POHANKA, Juraj SZABÓ, Václav STUPKA, Alena SAYDUEVA KNAPOVÁ, Vladimír ROHEL, Pavel HRABĚ, Petr MIENCIL, Radan BŘEZA and Petr DUŠEK. Metodika programu odpovědného hlášení kyberbezpečnostních zranitelností (Responsible Cybersecurity Vulnerability Reporting Program Methodology). 2022, 80 pp.

JAVORNÍK, Michal and Martin HUSÁK. Mission-centric Decision Support in Cybersecurity via Bayesian Privilege Attack Graph. Engineering Reports. John Wiley & Sons, Inc, 2022, vol. 4, No 12, p. "e12538", 25 pp. ISSN 2577-8196. Available from: https://dx.doi.org/10.1002/eng2.12538.

TOVARŇÁK, Daniel, Michal ČECH, Dušan TICHÝ and Vojtěch DOHNAL. ObservableDB: An Inverted Index for Graph-Based Traversal of Cyber Threat Intelligence. Online. In Varga, Pal, et al. Proceedings of the IEEE/IFIP Network Operations and Management Symposium 2022. USA: IEEE, 2022, p. 1-4. ISBN 978-1-6654-0601-7. Available from: https://dx.doi.org/10.1109/NOMS54207.2022.9789882.

ČEGAN, Jakub, Daniel TOVARŇÁK, Tomáš PLESNÍK, Martin KEPRT and Milan PERNICA. Organizační, technický a právní model sdíleného SOC. 2022.

ČEGAN, Jakub, Martin LEBEDA, Vojtěch HAMERSKÝ, Zdeněk FORMAN, Roman VESELÝ, Robert SCHINDLER, Jaromír EMMER and Kristýna STYBLÍKOVÁ. Platforma pro realizaci kyberbezpečnostních kurzů (Platform for the implementation of cybersecurity courses). 2022.

PORTEŠOVÁ, Šárka, Eva NOVÁKOVÁ, Růžena BLAŽKOVÁ, Michal JABŮREK, Ondřej STRAKA, Michal RŮŽIČKA, Matěj SMETANA, Jaroslav TOČÍK, Jana UNČOVSKÁ, Kateřina KREPSOVÁ, Ondřej DVOŘÁK, Ondřej VORÁČ, Jan KOTTMAN, Zdeněk NOVÁK, Petra BUŠKOVÁ, Jindřiška SVOBODOVÁ, Eva MALACHOVÁ and Tereza HRSTKOVÁ. Podporujeme nadané prvňáčky (We support gifted pupils in the first grades). 2022.

FIRC, Anton and Kamil MALINKA. Practical lessons of (deep)faking human speech. In Sborník příspěvků z 54. konference EurOpen.CZ, 28.5.-1.6.2022. 2022, p. 161-172. ISBN 978-80-86583-34-1.

SCHINDLER, Ondřej, Tomáš RAČEK and Radka SVOBODOVÁ. Prediction of QM-like partial atomic charges for alphafold. In XXII. Workshop of biophysical chemists and electrochemists. 2022. ISBN 978-80-280-0087-5.

VYKOPAL, Jan, Valdemar ŠVÁBENSKÝ, Pavel ŠEDA and Pavel ČELEDA. Preventing Cheating in Hands-on Lab Assignments. Online. In Proceedings of the 53rd ACM Technical Symposium on Computer Science Education (SIGCSE '22). New York, NY, USA: ACM, 2022, p. 78-84. ISBN 978-1-4503-9070-5. Available from: https://dx.doi.org/10.1145/3478431.3499420.

TRAPL, Dalibor, MArtin KRUPIČKA, Vladimír VIŠŇOVSKÝ, Jana HOZZOVÁ, Jaroslav OĽHA, Aleš KŘENEK and Vojtěch SPIWOK. Property Map Collective Variable as a Useful Tool for a Force Field Correction. Journal of Chemical Information and Modeling. American Chemical Society, 2022, vol. 62, No 3, p. 567-576. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/acs.jcim.1c00651.

PARDY, Filip, Jakub HYNŠT, Dana FIALOVÁ, Kristýna BRZOBOHATÁ, Lukáš HEJTMÁNEK and Šárka POSPÍŠILOVÁ. Reconstructing of the genome of Gregor Johann Mendel using state-of-the-art molecular and bioinformatics tools. In Mendel Genetics Conference 2022. 2022.

VOSTOUPAL, Jakub, Pavel LOUTOCKÝ, Kamil MALINKA, František KASL, Anna BLECHOVÁ, Andrej KRIŠTOFÍK, Jan KLEINER, Lukáš POHANKA, Juraj SZABÓ, Václav STUPKA, Alena SAYDUEVA KNAPOVÁ, Vladimír ROHEL, Pavel HRABĚ, Petr MIENCIL, Radan BŘEZA and Petr DUŠEK. Sada metodických, organizačních a právních nástrojů pro realizaci procedur odpovědného hlášení kyberbezpečnostních zranitelností a poskytnutí relevantních vzorových dokumentů (pravidla a podmínky RVDP, poskytnutí detailních vzorových podkladů, dokumentů atp. se zaměřením na soukromou i veřejnou správu vč. popisu relevantních parametrů) (A set of methodological, organizational and legal tools for the implementation of procedures for responsible reporting of cybersecurity vulnerabilities and provision of relevant model documents (rules and conditions of the RVDP, provision of detailed mod). 2022, 58 pp.

KOLOUCH, Jan, Tomáš PLESNÍK and Radovan IGLIAR. Security Operations Center (SOC) aneb nepřeceňujte jeden článek systému (část I.) (Security Operations Center (SOC) or Don't Overestimate One Link in the System (Part I)). Data Security Management. Praha: TATE International s.r.o., 2022, XXVI, No 2, p. 32-37. ISSN 1211-8737.

KOLOUCH, Jan, Tomáš PLESNÍK, Radovan IGLIAR and Andrea KROPÁČOVÁ. Security Operations Center (SOC) aneb nepřeceňujte jeden článek systému (část II.) (Security Operations Center (SOC) or Don't Overestimate One Link in the System (Part II)). Data Security Management. Praha: TATE International s.r.o., 2022, XXVI, No 3, p. 14-20. ISSN 1211-8737.

PLESNÍK, Tomáš, Jan KOLOUCH, Radovan IGLIAR and Andrea KROPÁČOVÁ. Security Operations Center (SOC) aneb nepřeceňujte jeden článek systému (část III.) (Security Operations Center (SOC) or Don't Overestimate One Link in the System (Part III)). Data Security Management. Praha: TATE International s.r.o., 2022, XXVI, No 4, p. 24-30. ISSN 1211-8737.

RAI, Ashutosh, Matej PIVOLUSKA, Souradeep SASMAL, Manik BANIK, Sibasish GHOSH and Martin PLESCH. Self-testing quantum states via nonmaximal violation in Hardy's test of nonlocality. PHYSICAL REVIEW A. UNITED STATES: AMER PHYSICAL SOC, 2022, vol. 105, No 5, p. 1-8. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.105.052227.

PEREŠÍNI, Martin, Ivan HOMOLIAK, Kamil MALINKA, Federico Matteo BENČIĆ and Tomáš HLADKÝ. Simulations of DAG-based Blockchain Protocols and Attacks on the PHANTOM Protocol via Transaction Selection Strategies. In Sborník příspěvků z 54. konference EurOpen.CZ, 28.5.-1.6.2022. 2022, p. 173-184. ISBN 978-80-86583-34-1.

ČELEDA, Pavel, Igor IGNÁC, Boris JADUŠ, Erik KOČAMBA, Lukáš MAJDAN, Dominik PILÁR, Pavel ŠEDA and Jan VYKOPAL. Software inteligentního asistenta pro hraní bezpečnostních her (Intelligent Assistant Software for Playing Cybersecurity Games). 2022.

TOVARŇÁK, Daniel and Matúš RAČEK. Software pro integrovaný datový pohled na chráněnou infrastrukturu (Software for an integrated data view over the protected infrastructure). 2022.

TOVARŇÁK, Daniel, Vojtěch DOHNAL, Dušan TICHÝ, Benjamin KRÁL and Martin MACHÁČ. Software pro podporu orchestrace bezpečnosti a řízení životního cyklu hrozeb (Software for security orchestration support and threat life-cycle management). 2022.

ANDONIADIS, Kamil, Pavel ČELEDA, Karolína DOČKALOVÁ BURSKÁ, Igor IGNÁC, Martin JUHÁS, Erik KOČAMBA, Radek OŠLEJŠEK, Juraj PALUBA, Dominik PILÁR, Pavel ŠEDA, Michal URBAN and Jan VYKOPAL. Software pro přípravu a realizaci bezpečnostních her (Software for Preparing and Carrying Out Cybersecurity Games). 2022.

ČELEDA, Pavel, Karolína DOČKALOVÁ BURSKÁ, Igor IGNÁC, Martin JUHÁS, Erik KOČAMBA, Radek OŠLEJŠEK, Dominik PILÁR, Pavel ŠEDA and Jan VYKOPAL. Software pro sběr a vyhodnocení dat z bezpečnostních her (Software for Collecting and Evaluating Data from Cybersecurity Games). 2022.

HUSÁK, Martin and Milan ČERMÁK. SoK: Applications and Challenges of using Recommender Systems in Cybersecurity Incident Handling and Response. Online. In The 17th International Conference on Availability, Reliability and Security (ARES 2022). Vienna: ACM, 2022, p. "25:1"-"25:10", 10 pp. ISBN 978-1-4503-9670-7. Available from: https://dx.doi.org/10.1145/3538969.3538981.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL, Pavel ČELEDA, Kristián TKÁČIK and Daniel POPOVIČ. Student Assessment in Cybersecurity Training Automated by Pattern Mining and Clustering. Education and Information Technologies. Springer, 2022, vol. 27, No 7, p. 9231-9262. ISSN 1360-2357. Available from: https://dx.doi.org/10.1007/s10639-022-10954-4.

FREXIA, Francesca, Cecilia MASCIA, Rudolf WITTNER, Markus PLASS, Heimo MÜLLER, Jörg GEIGER and Petr HOLUB. The Common Provenance Model: Capturing Distributed Provenance in Life Sciences Processes. In Challenges of Trustable AI and Added-Value on Health. 2022. Available from: https://dx.doi.org/10.3233/SHTI220489.

MIHÁLIKOVÁ, Ivana, Matej PIVOLUSKA, Martin PLESCH, Martin FRIÁK, Daniel NAGAJ and Mojmír ŠOB. The Cost of Improving the Precision of the Variational Quantum Eigensolver for Quantum Chemistry. Nanomaterials. London: MDPI, 2022, vol. 12, No 2, p. 1-22. ISSN 2079-4991. Available from: https://dx.doi.org/10.3390/nano12020243.

FIRC, Anton and Kamil MALINKA. The dawn of a text-dependent society: deepfakes as a threat to speech verification systems. Online. In SAC '22: Proceedings of the 37th ACM/SIGAPP Symposium on Applied Computing. Association for Computing Machinery, 2022, p. 1646--1655. Available from: https://dx.doi.org/10.1145/3477314.3507013.

DUDOVÁ, Zdenka, Nathalie CONTE, Jeremy MASON, Dalibor STUCHLÍK, Radim PEŠA, Csaba HALMAGYI, Zinaida PEROVA, Abayomi MOSAKU, Ross THORNE, Alex FOLLETTE, Ľuboslav PIVARČ, Radim ŠAŠINKA, Muhammad USMAN, Steven NEUHAUSER, Dale A BEGLEY, Debra M KRUPKE, Massimiliano FRASSÀ, Alessandro FIORI, Riccardo CORSI, Luca VEZZADINI, Claudio ISELLA, Andrea BERTOTTI, Carol BULT, Helen PARKINSON, Enzo MEDICO, Terrence MEEHAN and Aleš KŘENEK. The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization. BMC Genomics. BioMed Central, 2022, vol. 23, No 1, p. 1-11. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-022-08367-1.

FILIPOVIČ, Jiří, Jana HOZZOVÁ, Amin NEZARAT, Jaroslav OĽHA and Filip PETROVIČ. Using hardware performance counters to speed up autotuning convergence on GPUs. Journal of Parallel and Distributed Computing. Elsevier, 2022, vol. 160, February, p. 16-35. ISSN 0743-7315. Available from: https://dx.doi.org/10.1016/j.jpdc.2021.10.003.

DOSTÁL, Otto, Jiří VÁVRA, Martin KYSELÁK, Karel SLAVÍČEK, Vladimír SCHINDLER and David GRENAR. Vyhodnocovací elektronika včetně řídícího SW (Evaluation electronics including control software). 2022.

VODOVÁ, Libuše, Kamil MALINKA and Martina JANČOVÁ. Vytváření výukových modelů pomocí technologie 3D tisku. In Mezinárodní konference EDUCO 2022, XVII.ročník. 2022.

VODOVÁ, Libuše, Kamil MALINKA and Martina JANČOVÁ. Výtvaření výukových modelů pomocí technologie 3D tisku. In Mezinárodní konference EDUCO. 2022.

VODOVÁ, Libuše, Martina JANČOVÁ, Kamil MALINKA, Lenka SOBKOVÁ and Ivo BEDNÁŘ. 3D tisk jako příležitost pro vytváření výukových modelů pro výuku přírodopisu a biologie. In Trendy v didaktice biologie. 2022.

VODOVÁ, Libuše, Martina JANČOVÁ, Kamil MALINKA, Lenka SOBKOVÁ and Ivo BEDNÁŘ. 3D tisk jako příležitost pro vytváření výukových modelů pro výuku přírodopisu a biologie. 2022.

REIHS, Robert, Rumyana PROYNOVA, Saher MAQSOOD, Maxmilian ATAIAN, Martin LABLANS, Philip R. QUINLAN, Emma LAWRENCE, Erinna BOWMAN, Esther VAN ENCKEVORT, Dominik František BUČÍK, Heimo MÜLLER and Petr HOLUB. BBMRI-ERIC Negotiator: Implementing Efficient Access to Biobanks. Biopreservation and Biobanking. NEW ROCHELLE: MARY ANN LIEBERT, INC, 2021, 8 pp. ISSN 1947-5535. Available from: https://dx.doi.org/10.1089/bio.2020.0144.

LÍŠKA, Martin, Dávid LUPTÁK, Vít STARÝ NOVOTNÝ, Michal RŮŽIČKA, Boris SHMINKE, Petr SOJKA, Michal ŠTEFÁNIK and Makarius WENZEL. CICM'21 Systems Entries. Online. In 978-3-030-81097-9. INTELLIGENT COMPUTER MATHEMATICS (CICM 2021). CHAM: SPRINGER INTERNATIONAL PUBLISHING AG, 2021, p. 245-248. ISBN 978-3-030-81096-2. Available from: https://dx.doi.org/10.1007/978-3-030-81097-9_20.

TOVARŇÁK, Daniel, Matúš RAČEK and Petr VELAN. Cloud Native Data Platform for Network Telemetry and Analytics. Online. In Müge Sayıt, Stuart Clayman. 17th International Conference on Network and Service Management. Izmir, Turkey (Virtual): IFIP Open Digital Library, IEEE Xplore, 2021, p. 394-396. ISBN 978-3-903176-36-2. Available from: https://dx.doi.org/10.23919/CNSM52442.2021.9615568.

VIŠŇOVSKÝ, Vladimír, Viktória SPIŠAKOVÁ, Jana HOZZOVÁ, Jaroslav OĽHA, Dalibor TRAPL, Vojtěch SPIWOK, Lukáš HEJTMÁNEK and Aleš KŘENEK. Complex simulation workflows in containerized high-performance environment. In Armenia S., Geril P. Proc. ESM 2021. Brusel: EUROSIS, 2021, p. 42-45. ISBN 978-94-92859-18-1.

OŠLEJŠEK, Radek, Vít RUSŇÁK, Karolína DOČKALOVÁ BURSKÁ, Valdemar ŠVÁBENSKÝ, Jan VYKOPAL and Jakub ČEGAN. Conceptual Model of Visual Analytics for Hands-on Cybersecurity Training. IEEE Transactions on Visualization and Computer Graphics. 2021, vol. 27, No 8, p. 3425-3437. ISSN 1077-2626. Available from: https://dx.doi.org/10.1109/TVCG.2020.2977336.

MALINKA, Kamil and Vladimír SCHINDLER. Current Challenges in the Educational Usage of 3D Printing in Primary and Secondary Schools. Online. In Theo Bastiaens. Proceedings of EdMedia + Innovate Learning. United States: Association for the Advancement of Computing in Education (AACE), 2021, p. 88-96. ISBN 978-1-939797-56-8.

ŠVÁBENSKÝ, Valdemar, Pavel ČELEDA, Jan VYKOPAL and Silvia BRIŠÁKOVÁ. Cybersecurity Knowledge and Skills Taught in Capture the Flag Challenges. Computers & Security. Elsevier, 2021, vol. 102, No 102154, p. 1-14. ISSN 0167-4048. Available from: https://dx.doi.org/10.1016/j.cose.2020.102154.

SLANINÁKOVÁ, Terézia, Matej ANTOL, Jaroslav OĽHA and Vlastislav DOHNAL. Data-driven Learned Metric Index: an Unsupervised Approach. In 14th International Conference on Similarity Search and Applications (SISAP 2021). Cham: Springer, 2021, p. 81-94. ISBN 978-3-030-89656-0. Available from: https://dx.doi.org/10.1007/978-3-030-89657-7_7.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL, Pavel ŠEDA and Pavel ČELEDA. Dataset of Shell Commands Used by Participants of Hands-on Cybersecurity Training. Data in Brief. Elsevier, 2021, vol. 38, September, p. 1-9. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2021.107398.

JIMÉNEZ-MORENO, Amaya, David STŘELÁK, Jiří FILIPOVIČ, José María CARAZO and Carlos Óscar S. SORZANO. DeepAlign, a 3D Alignment Method based on Regionalized Deep Learning for Cryo-EM. Journal of Structural Biology. San Diego,USA: Academic Press, 2021, vol. 213, No 2, p. "107712", 14 pp. ISSN 1047-8477. Available from: https://dx.doi.org/10.1016/j.jsb.2021.107712.

RAI, A., Matej PIVOLUSKA, Martin PLESCH, S. SASMAL, M. BANIK and S. GHOSH. Device-independent bounds from Cabello's nonlocality argument. Physical review A. New York: The American Physical Society, 2021, vol. 103, No 6, p. 1-7. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.103.062219.

PITNER, Tomáš, Otto DOSTÁL, Otto DOSTÁL, Pavel LOUTOCKÝ, František KASL and Pavel ANDRES. Dílčí projekt „CovidCareShare – Bezpečné sdílení medicínských dat v období pandemie Covid19“ Výsledek V1 – Architektura systému pro bezpečné sdílení medicínských dat (Sub-project "CovidCareShare - Secure medical data sharing in the Covid19 pandemic" Deliverable V1 - System architecture for secure medical data sharing). Brno: Neuveden, 2021, 20 pp. Dílčí projekt CovidCareShare.

PITNER, Tomáš, Otto DOSTÁL, Otto DOSTÁL, Pavel LOUTOCKÝ, František KASL and Pavel ANDRES. Dílčí projekt „CovidCareShare – Bezpečné sdílení medicínských dat v období pandemie Covid19“ Výsledek V2 – Studie proveditelnosti (Sub-project "CovidCareShare - Secure medical data sharing in the Covid19 pandemic" Deliverable V2 - Feasibility study). Brno: Neuveden, 2021, 8 pp. Dílčí projekt CovidCareShare.

WITTNER, Rudolf, Jörg GEIGER, Cecilia MASCIA, Francesca FREXIA, Heimo MULLER and Petr HOLUB. Enabling Trustworthy and Traceable Research by Non-Repudiable Opaque Provenance in a Distributed Environment. In Provenance Week 2021; Workshop on Provenance for Transparent Research. 2021.

ŠPAČEK, Stanislav, Daniel TOVARŇÁK and Pavel ČELEDA. Enriching DNS Flows with Host-Based Events to Bypass Future Protocol Encryption. In Audun Jøsang, Lynn Futcher, Janne Hagen. ICT Systems Security and Privacy Protection. 1st ed. Oslo: Springer, 2021, p. 302-316. ISBN 978-3-030-78119-4. Available from: https://dx.doi.org/10.1007/978-3-030-78120-0_20.

ČEGAN, Jakub, Pavla VIZVÁRY, Vojtěch HAMERSKÝ, Natálie VELECKÁ and Vladimír ROHEL. Framework a postupy pro vzdělávání CSIRT týmů (CSIRT educational framework and processes). 2021.

TOVARŇÁK, Daniel, Lukáš SADLEK and Pavel ČELEDA. Graph-Based CPE Matching for Identification of Vulnerable Asset Configurations. Online. In 2021 IFIP/IEEE International Symposium on Integrated Network Management (IM 2021). Washington DC, USA: IEEE, 2021, p. 986-991. ISBN 978-3-903176-32-4.

JIRSÍK, Tomáš and Petr VELAN. Host Behavior in Computer Network: One-Year Study. IEEE Transactions on Network and Service Management. 2021, vol. 18, No 1, p. 822-838. ISSN 1932-4537. Available from: https://dx.doi.org/10.1109/TNSM.2020.3036528.

DODA, M., Matej PIVOLUSKA and Martin PLESCH. Choice of mutually unbiased bases and outcome labeling affecting measurement outcome secrecy. Physical review A. New York: The American Physical Society, 2021, vol. 103, No 3, p. 032206-32213. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.103.032206.

S. SORZANO, Carlos Oscar, Amaya JIMÉNEZ-MORENO, David MALUENDA, Erney RAMÍREZ-APORTELA, Marta MARTÍNEZ, Ana CUERVO, Roberto MELERO, Jose Javier CONESA, Ruben SÁNCHEZ-GARCÍA, David STŘELÁK, Jiří FILIPOVIČ, Estrella FERNÁNDEZ-GIMÉNEZ, Federico DE ISIDRO-GÓMEZ, David HERREROS, Pablo CONESA, Laura DEL CAÑO, Yunior FONSECA, Jorge JIMÉNEZ DE LA MORENA, Jose Ramon MACÍAS, Patricia LOSANA, Roberto MARABINI and Jose-Maria CARAZO. Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods. In Structural Proteomics. Clifton, N.J.: Springer US, 2021, p. 257-289. Methods in Molecular Biology. ISBN 978-1-0716-1405-1. Available from: https://dx.doi.org/10.1007/978-1-0716-1406-8_13.

PITNER, Tomáš, Karel SLAVÍČEK, Michal RANDÁK, Lukáš GROLIG, Bacem MBAREK, Petr ČÍKA, Martin ŠTŮSEK, Petr ILGNER, Marek SIKORA, P. HAVELKA, M. BEDNÁŘ and Z. POSPÍŠIL. Implementace komunikačních rozhraní v monitorovacích systémech přenosových soustav (Implementation of communication interfaces in transmission system monitoring systems). 2021.

DOSTÁL, Otto, Karel SLAVÍČEK, Jaroslav LEDVINKA, COMIMPEX spol. s.r.o. DUŠAN PAROULEK, COMIMPEX spol. s.r.o. MICHAL STRNAD, Mediatrade s.r.o. PAVEL TÁBORSKÝ and VŠB-TUO MARTIN AUGUSTÝNEK. Integrovaný aktivní monitorovací systém pro pacienty s externími kardiostimulátory (Integrated active monitoring system for patients with external pacemakers). 2021.

WITTNER, Rudolf, Petr HOLUB, Heimo MÜLLER, Joerg GEIGER, Carole GOBLE, Stian SOILAND-REYES, Luca PIREDDU, Francesca FREXIA, Cecilia MASCIA, Elliot FAIRWEATHER, Jason R SWEDLOW, Josh MOORE, Caterina STRAMBIO, David GRUNWALD and Hiroki NAKAE. ISO 23494: Biotechnology – Provenance Information Model for Biological Specimen And Data. In Lecture Notes in Computer Science. Cham: Springer, 2021, p. 222-225. ISBN 978-3-030-80959-1. Available from: https://dx.doi.org/10.1007/978-3-030-80960-7_16.

PETROVIČ, Filip, Jiří FILIPOVIČ, David STŘELÁK, Jana HOZZOVÁ and Richard TREMBECKÝ. Kernel Tuning Toolkit 2.0. 2021.

ČEGAN, Jakub, Vladimír ROHEL, Milan ČERMÁK, Petr VELAN, Vojtěch HAMERSKÝ, Natálie VELECKÁ, Martin LEBEDA, Tomáš KACVINSKÝ and Zdeněk VYDRA. Kyberbezpečnost lékařských přístrojů (Cybersecurity of medical appliances). 2021.

ANTOL, Matej, Jaroslav OĽHA, Terézia SLANINÁKOVÁ and Vlastislav DOHNAL. Learned metric index - proposition of learned indexing for unstructured data. Information Systems. Elsevier, 2021, vol. 100, No 101774, p. 1-12. ISSN 0306-4379. Available from: https://dx.doi.org/10.1016/j.is.2021.101774.

BEÁTA SZABÓ-TAKÁCS, TAMÁS TAKÁCS and Aleš ROČEK. MeteoRead: Client Software for Inserting Observed Atmospheric Data into MySQL Database and Downloading them into Different File Format. Journal of Software Engineering and Applications. 2021, vol. 14, No 10. ISSN 1945-3116. Available from: https://dx.doi.org/10.4236/jsea.2021.1410033.

ANTOL, Matej, Miriama JÁNOŠOVÁ and Vlastislav DOHNAL. Metric hull as similarity-aware operator for representing unstructured data. Pattern Recognition Letters. Amsterdam: Elsevier, 2021, vol. 149, September 2021, p. 91-98. ISSN 0167-8655. Available from: https://dx.doi.org/10.1016/j.patrec.2021.05.011.

NEUMANN, S.P., T. SCHEIDL, M. SELIMOVIC, Matej PIVOLUSKA, B. LIU, M. BOHMANN and R. URSIN. Model for optimizing quantum key distribution with continuous-wave pumped entangled-photon sources. Physical review A. New York: The American Physical Society, 2021, vol. 104, No 2, p. 022406-22416. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.104.022406.

FAIRWEATHER, Elliot, Rudolf WITTNER, Martin CHAPMAN, Petr HOLUB and Vasa CURCIN. Non-repudiable provenance for clinical decision support systems. In Lecture Notes in Computer Science. Cham: Springer, 2021, p. 165-182. ISBN 978-3-030-80959-1. Available from: https://dx.doi.org/10.1007/978-3-030-80960-7_10.

HU, X.M., C. ZHANG, Y. GUO, F.X. WANG, W.B. XING, C.X. HUANG, B.H. LIU, Y.F. HUANG, C.F. LI, G.C. GUO, X.Q. GAO, Matej PIVOLUSKA and M. HUBER. Pathways for Entanglement-Based Quantum Communication in the Face of High Noise. Physical Review Letters. COLLEGE PK: The American Physical Society, 2021, vol. 127, No 11, p. 1-7. ISSN 0031-9007. Available from: https://dx.doi.org/10.1103/PhysRevLett.127.110505.

HORA, Tomáš, Jiří ČECH and Karel SLAVÍČEK. Prototyp IoT senzoru koncentrace CO2 (Prototype of IoT CO2 sensor). 2021.

DODA, M., M. HUBER, G. MURTA, Matej PIVOLUSKA, Martin PLESCH and C. VLACHOU. Quantum Key Distribution Overcoming Extreme Noise: Simultaneous Subspace Coding Using High-Dimensional Entanglement. PHYSICAL REVIEW APPLIED. COLLEGE PK: AMER PHYSICAL SOC, 2021, vol. 15, No 3, p. 034003-34017. ISSN 2331-7019. Available from: https://dx.doi.org/10.1103/PhysRevApplied.15.034003.

ŠEDA, Pavel, Jan VYKOPAL, Valdemar ŠVÁBENSKÝ and Pavel ČELEDA. Reinforcing Cybersecurity Hands-on Training With Adaptive Learning. Online. In 2021 IEEE Frontiers in Education Conference (FIE). New York, NY, USA: IEEE, 2021, p. 1-9. ISBN 978-1-6654-3851-3. Available from: https://dx.doi.org/10.1109/FIE49875.2021.9637252.

VYKOPAL, Jan, Pavel ČELEDA, Pavel ŠEDA, Valdemar ŠVÁBENSKÝ and Daniel TOVARŇÁK. Scalable Learning Environments for Teaching Cybersecurity Hands-on. Online. In 2021 IEEE Frontiers in Education Conference (FIE). New York, NY, USA: IEEE, 2021, p. 1-9. ISBN 978-1-6654-3851-3. Available from: https://dx.doi.org/10.1109/FIE49875.2021.9637180.

RANGEL PAMPLONA PIZARRO PINTO, José Gaspar, Ondřej VÁVRA, Sérgio Manuel MARQUES, Jiří FILIPOVIČ, David BEDNÁŘ and Jiří DAMBORSKÝ. Screening of world approved drugs against highly dynamical spike glycoprotein of SARS-CoV-2 using CaverDock and machine learning. Computational and Structural Biotechnology Journal. Amsterdam: Elsevier, 2021, vol. 19, May, p. 3187-3197. ISSN 2001-0370. Available from: https://dx.doi.org/10.1016/j.csbj.2021.05.043.

HOZZOVÁ, Jana, Jiří FILIPOVIČ, Amin NEZARAT, Jaroslav OĽHA and Filip PETROVIČ. Searching CUDA code autotuning spaces with hardware performance counters: data from benchmarks running on various GPU architectures. Data in Brief. Elsevier, 2021, vol. 39, December, p. 1-12. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2021.107631.

PIVOLUSKA, Matej, Martin PLESCH, M. FARKAS, Natália RUŽIČKOVÁ, C. FLEGEL, N.H. VALENCIA, W. MCCUTCHEON, M. MALIK and EA AGUILAR. Semi-device-independent random number generation with flexible assumptions. NPJ QUANTUM INFORMATION. BERLIN: NATURE RESEARCH, 2021, vol. 7, No 1, p. 1-12. ISSN 2056-6387. Available from: https://dx.doi.org/10.1038/s41534-021-00387-1.

MÍČ, Vladimír, Tomáš RAČEK, Aleš KŘENEK and Pavel ZEZULA. Similarity Search for an Extreme Application: Experience and Implementation. In Nora Reyes, Richard Connor, Nils Kriege, Daniyal Kazempour, Ilaria Bartolini, Erich Schubert, Jian-Jia Chen. Similarity Search and Applications: 14th International Conference, SISAP 2021, Dortmund, Germany, September 29 - October 1, 2021, Proceedings. Cham: Springer, 2021, p. 265-279. ISBN 978-3-030-89656-0. Available from: https://dx.doi.org/10.1007/978-3-030-89657-7_20.

HOZZOVÁ, Jana, Ondřej VÁVRA, David BEDNÁŘ and Jiří FILIPOVIČ. Simulation of Ligand Transport in Receptors Using CaverDock. In Flavio Ballante. Protein-Ligand Interactions and Drug Design. New York: Humana, New York, NY, 2021, p. 105-124. Methods in Molecular Biology, vol 2266. ISBN 978-1-0716-1208-8. Available from: https://dx.doi.org/10.1007/978-1-0716-1209-5_6.

PITNER, Tomáš, Petr ČÍKA, Martin ŠTŮSEK, Petr ILGNER, Marek SIKORA, Karel SLAVÍČEK, Michal RANDÁK, Bacem MBAREK, Lukáš GROLIG, Petr HAVELKA, Michal BEDNÁŘ and Zdeněk POSPÍŠIL. Software pro generování datového provozu pro monitorovací a řídicí systémy TSO na protokolech ICCP-TASE.2 a IEC 60870-5-101 (Software for data traffic generation for TSO monitoring and control systems based on ICCP-TASE.2 and IEC 60870-5-101 protocols). 2021.

ČELEDA, Pavel, Andrej TOMČI, Daniel IĽKOVIČ, Martin MADZIA, Jana ZIKOVÁ, Aleš SMRČKA, Tomáš FIEDOR, Martin HRUŠKA, Martin ŠVÉDA and Lubomír POSPÍŠIL. Software pro měření a vyhodnocení výkonnostních parametrů (Software for Measurement and Evaluation of Performance Parameters). 2021.

VELAN, Petr, Petr ŠPRINGL, Jan FRÜHBAUER, Tomáš JÁNSKÝ and Boris PARÁK. Software pro správu a řízení měření v cloudovém prostředí (Software for control and management of network monitoring in a cloud environment). 2021.

ČERMÁK, Milan and Pavel ČELEDA. Stream-Based IP Flow Analysis. Online. In Toufik Ahmed, Olivier Festor, Yacine Ghamri-Doudane, Joon-Myung Kang, Alberto E. Schaeffer-Filho, Radu State, Burkhard Stiller. IFIP/IEEE International Symposium on Integrated Network Management, IM 2021. Bordeaux, France: IFIP Open Digital Library, 2021, p. 736-741. ISBN 978-3-903176-32-4.

HUSÁK, Martin, Martin LAŠTOVIČKA and Daniel TOVARŇÁK. System for Continuous Collection of Contextual Information for Network Security Management and Incident Handling. Online. In ARES 2021: The 16th International Conference on Availability, Reliability and Security. Virtual Event: Association for Computing Machinery, 2021, p. 1-8. ISBN 978-1-4503-9051-4. Available from: https://dx.doi.org/10.1145/3465481.3470037.

CSABA, Virág, Jakub ČEGAN, Lieskovan TOMÁŠ and Merialdo MATTEO. The Current State of The Art and Future of European Cyber Range Ecosystem. Online. In 2021 IEEE International Conference on Cyber Security and Resilience (CSR). Rhodes: IEEE Xplore Digital Library, 2021, p. 390-395. ISBN 978-1-6654-0285-9. Available from: https://dx.doi.org/10.1109/CSR51186.2021.9527931.

KYSELÁK, Martin, Zdeněk VYLEŽICH, Jiří VÁVRA, David GRENAR and Karel SLAVÍČEK. The Long Fiber Optic Paths to Power the Thermal Field Disturbance Sensor. Online. In Proceedings of SPIE. San Francisco: SPIE-INT SOC OPTICAL ENGINEERING, 2021, p. 1-7. ISBN 978-1-5106-4200-3. Available from: https://dx.doi.org/10.1117/12.2575832.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL, Daniel TOVARŇÁK and Pavel ČELEDA. Toolset for Collecting Shell Commands and Its Application in Hands-on Cybersecurity Training. Online. In 2021 IEEE Frontiers in Education Conference (FIE). New York, NY, USA: IEEE, 2021, p. 1-9. ISBN 978-1-6654-3851-3. Available from: https://dx.doi.org/10.1109/FIE49875.2021.9637052.

GALANSKÁ, Katarína and Kamil MALINKA. Usable Security from IT Professional's Perspective. In Cyberspace 2021. 2021.

ČEGAN, Jakub, Tomáš KACVINSKÝ, Zdeněk VYDRA, Martin LEBEDA, Jakub Bartolomej KOŠUTH, Petr VELAN, Milan ČERMÁK, Andrej TOMČI, Ivo NUTÁR, Martin LAŠTOVIČKA, Natálie VELECKÁ, Pavla VIZVÁRY, Vojtěch HAMERSKÝ, Daniel KOUŘIL, Ondřej BUDAY, Martin KOTLÍK, Vladimír ROHEL, Jiří SÝKORA, Michal ZVÁNOVEC, Filip GRÉGR and Petr SLAVÍK. Virtualizované prostředí pro trénink CSIRT týmu (Virtual environment for training of the CSIRT teams). 2021.

MAREK, Tomáš. Vizualizace dat jako informační bariéra u nevidomých uživatelů (Data Visualization as an Information Barrier for Blind Users). ProInflow. Brno: Masarykova univerzita, 2021, vol. 13, No 2, p. 50-67. ISSN 1804-2406. Available from: https://dx.doi.org/10.5817/ProIn2021-2-4.

ROČEK, Aleš, Michal JAVORNÍK, Karel SLAVÍČEK and Otto DOSTÁL. Zero Watermarking: Critical Analysis of Its Role in Current Medical Imaging. Journal of Digital Imaging. 2021, vol. 34, No 1, p. 204-211. ISSN 0897-1889. Available from: https://dx.doi.org/10.1007/s10278-020-00396-0.

LVOVSKÁ, Leni and Kamil MALINKA. 3D tisk a jeho uplatnění na základních a středních školách (3D printing and its application in primary and secondary schools). Online. In Roman Hašek. Sborník příspěvků 10. konference Užití počítačů ve výuce matematiky. České Budějovice: Jihočeská univerzita v Českých Budějovicíc, 2021, p. 94-103. ISBN 978-80-7394-906-8.

BRÁZDIL, Tomáš, David PORTEŠ, Jiří FILIPOVIČ, Jana HOZZOVÁ, Thomas EVANGELIDIS and Konstantinos TRIPSIANES. 4D-GRAPHS. 2021.

PETROVIČ, Filip, David STŘELÁK, Jana HOZZOVÁ, Jaroslav OĽHA, Richard TREMBECKÝ, Siegfried BENKNER and Jiří FILIPOVIČ. A benchmark set of highly-efficient CUDA and OpenCL kernels and its dynamic autotuning with Kernel Tuning Toolkit. Future Generation Computer Systems. Elsevier, 2020, vol. 108, July, p. 161-177. ISSN 0167-739X. Available from: https://dx.doi.org/10.1016/j.future.2020.02.069.

ČECH, Michal, Roman CHRENŠŤ, Daniel TOVARŇÁK and Tomáš PLESNÍK. Adaptér pro systém pro správu zdrojů (Asset management adapter). 2020.

KOTT, Alexander, Paul THERON, Luigi MANCINI, Edlira DUSHKU, Agostino PANICO, Martin DRAŠAR, Benoit LEBLANC, Paul LOSIEWICZ, Alessandro GUARINO, Mauno PIHELGAS and Krzysztof RZADCA. An introductory preview of Autonomous Intelligent Cyber-defense Agent reference architecture, release 2.0. The Journal of Defense Modeling and Simulation: Applications, Methodology, Technology. THOUSAND OAKS: SAGE PUBLICATIONS INC, 2020, vol. 17, No 1, p. 51-54. ISSN 1548-5129. Available from: https://dx.doi.org/10.1177/1548512919886163.

REBOK, Tomáš, Michal BATKO, Milan ČERMÁK, Martin DRAŠAR, Daniel TOVARŇÁK, Pavel ZEZULA, Martin MACÁK, Matúš GUOTH, Matej BABEJ, Dávid BRILLA and Martin KAŽIMÍR. ANALYZA – Datový sklad (ANALYZA – Dara Warehouse). 2020.

REBOK, Tomáš, Michal BATKO, Milan ČERMÁK, Martin DRAŠAR, Jarešová MIROSLAVA, Barbora KOZLÍKOVÁ, Kristína ZÁKOPČANOVÁ, Pavel ZEZULA, Katarína FURMANOVÁ, Marko ŘEHÁČEK, Jozef BÁTRNA and Daniel PLAKINGER. ANALYZA – Vizualizační komponenta – Visilant (ANALYZA – Visualization Component – Visilant). 2020.

REBOK, Tomáš, Michal BATKO, Milan ČERMÁK, Barbora KOZLÍKOVÁ, Vladimír MÍČ, Filip NÁLEPA, David NOVÁK, Daniel TOVARŇÁK, Pavel ZEZULA, Jakub PESCHEL, Kasanič DENIS, Denisa ŠRÁMKOVÁ, Erik HRICIŠÁK, Vladimír LAZÁRIK and Kristián GUTIČ. ANALYZA – Výpočetní a orchestrační subsystém (ANALYZA – Computation and Orchestration Subsystem). 2020.

LHOTÁK, Marin, Martin DUDA, Andrea FOJTŮ, Jan HEJZL, Jan HUTAŘ, Filip KERSCH, Jana KŘÍŽOVÁ, Marek MELICHAR, Martina NEZBEDOVÁ, Miroslav PAVELKA, Eliška PAVLÁSKOVÁ, Jan POKORSKÝ, Michal PŠENIČKA, Ivana ŠLAPÁKOVÁ, Zdeněk TICHÝ, Miroslav BARTOŠEK, Jan BILWACHS, Lukáš HEJTMÁNEK, Zdeněk HRUŠKA, Václav JIROUŠEK, Pavlína KOČIŠOVÁ, Vlastimil KREJČÍŘ, Iveta LODROVÁ, Natalie OSTRÁKOVÁ, Michal RŮŽIČKA, Zdeněk VAŠEK and Petr ŽABIČKA. ARCLib. 2020.

HOMOLIAK, Ivan, Kamil MALINKA and Petr HANÁČEK. ASNM Datasets: A Collection of Network Attacks for Testing of Adversarial Classifiers and Intrusion Detectors. IEEE Access. PISCATAWAY: IEEE Xplore Digital Library, 2020, vol. 8, p. 112427-112453. ISSN 2169-3536. Available from: https://dx.doi.org/10.1109/ACCESS.2020.3001768.

DUDOVÁ, Zdenka, Alice HÁLOVÁ, Dalibor VALÍK and Petr HOLUB. BBMRI-CZ as a Partner for Personalized Medicine and Translational Medical Research. In RANK 2020. 2020. ISBN 978-80-87436-17-2.

HOLUB, Petr, Lukasz KOZERA, Francesco FLORINDI, Esther van ENCKEVORT, Morris SWERTZ, Robert REIHS, Andrea WUTTE, Dalibor VALÍK and Michaela Th MAYRHOFER. BBMRI-ERIC’s contributions to research and knowledge exchange on COVID-19. European Journal of Human Genetics. London: Nature Publishing Group, 2020, vol. 28, No 6, p. 728-731. ISSN 1018-4813. Available from: https://dx.doi.org/10.1038/s41431-020-0634-8.

VYKOPAL, Jan, Valdemar ŠVÁBENSKÝ and Ee-Chien CHANG. Benefits and Pitfalls of Using Capture The Flag Games in University Courses. Online. In Proceedings of the 51st ACM Technical Symposium on Computer Science Education (SIGCSE '20). New York, NY, USA: ACM, 2020, p. 752-758. ISBN 978-1-4503-6793-6. Available from: https://dx.doi.org/10.1145/3328778.3366893.

KYSELÁK, Martin, Jan MASCHKE, Marco PANASCI, Karel SLAVÍČEK, Otto DOSTÁL, David GRENAR, Milan ČUČKA and Miloslav FILKA. Birefringence influence on polarization changes and frequency on optical fiber. Online. In Proceedings of SPIE. online: SPIE, 2020, p. 1-13. ISBN 978-1-5106-3889-1. Available from: https://dx.doi.org/10.1117/12.2573696.

FILIPOVIČ, Jiří, Ondřej VÁVRA, Jan PLHÁK, David BEDNÁŘ, Sérgio Manuel MARQUES, Jan BREZOVSKÝ, Luděk MATYSKA and Jiří DAMBORSKÝ. CaverDock: A Novel Method for the Fast Analysis of Ligand Transport. IEEE/ACM Transactions on Computational Biology and Bioinformatics. Los Alamitos: IEEE Computer Society, 2020, vol. 17, No 5, p. 1625-1638. ISSN 1545-5963. Available from: https://dx.doi.org/10.1109/TCBB.2019.2907492.

JIRSÍK, Tomáš and Pavel ČELEDA. Cyber Situation Awareness via IP Flow Monitoring. Online. In 2020 IEEE/IFIP Network Operations and Management Symposium (NOMS 2020). Hungary: IEEE Xplore Digital Library, 2020, p. 1-6. ISBN 978-1-7281-4973-8.

HUSÁK, Martin, Martin ŽÁDNÍK, Václav BARTOŠ and Pavol SOKOL. Dataset of intrusion detection alerts from a sharing platform. Data in Brief. Elsevier, 2020, vol. 33, December, p. 1-12. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2020.106530.

JAVORNÍK, Michal, Jana KOMÁRKOVÁ, Lukáš SADLEK and Martin HUSÁK. Decision Support for Mission-Centric Network Security Management. Online. In NOMS 2020 - 2020 IEEE/IFIP Network Operations and Management Symposium. Budapest, Hungary: IEEE, 2020, p. 1-6. ISBN 978-1-7281-4973-8. Available from: https://dx.doi.org/10.1109/NOMS47738.2020.9110261.

CATCHPOOLE, Daniel R, Francesco FLORINDI, Caitlin AHERN, Debra Leiolani GARCIA, Piper MULLINS, Esther Van ENCKEVORT, Andy ZAAYENGA, Michaela Th MAYRHOFER and Petr HOLUB. Expanding the BBMRI-ERIC Directory into a Global Catalogue of COVID-19–Ready Collections: A Joint Initiative of BBMRI-ERIC and ISBER. Biopreservation and Biobanking. 2020, vol. 18, No 5, p. 479-480. Available from: https://dx.doi.org/10.1089/bio.2020.29075.drc.

HU, Xiao-Min, WB. XING, C. ZHANG, BH. LIU, Matej PIVOLUSKA, M. HUBER, YF. HUANG, CF. LI and GC. GUO. Experimental creation of multi-photon high-dimensional layered quantum states. NPJ QUANTUM INFORMATION. BERLIN: NATURE RESEARCH, 2020, vol. 6, No 1, p. 1-5. ISSN 2056-6387. Available from: https://dx.doi.org/10.1038/s41534-020-00318-6.

OĽHA, Jaroslav, Jana HOZZOVÁ, Jan FOUSEK and Jiří FILIPOVIČ. Exploiting historical data: Pruning autotuning spaces and estimating the number of tuning steps. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE. HOBOKEN: WILEY, 2020, vol. 32, No 21, p. 1-15. ISSN 1532-0626. Available from: https://dx.doi.org/10.1002/cpe.5962.

BERAN, Michal, František HRDINA, Daniel KOUŘIL, Radek OŠLEJŠEK and Kristína ZÁKOPČANOVÁ. Exploratory Analysis of File System Metadata for Rapid Investigation of Security Incidents. Online. In 2020 IEEE Symposium on Visualization for Cyber Security (VizSec). Salt Lake City, US: IEEE, 2020, p. 11-20. ISBN 978-1-7281-8262-9. Available from: https://dx.doi.org/10.1109/VizSec51108.2020.00008.

KŘENEK, Aleš, Jana HOZZOVÁ, Jaroslav OĽHA, Dalibor TRAPL and Vojtěch SPIWOK. Exploring Protein Folding Space with Neural Network Guided Simulations. In Alexandre Nketsa. MODELLING AND SIMULATION 2020. Brusel: EUROSIS-ETI, 2020, p. 305-309. ISBN 978-94-92859-12-9.

STŘELÁK, David, Jiří FILIPOVIČ, Amaya JIMÉNEZ-MORENO, Jose María CARAZO and Carlos Óscar SÁNCHEZ SORZANO. FlexAlign: An Accurate and Fast Algorithm for Movie Alignment in Cryo-Electron Microscopy. Electronics. Switzerland: MDPI, 2020, vol. 9, No 6, p. 1-25. ISSN 2079-9292. Available from: https://dx.doi.org/10.3390/electronics9061040.

KYSELÁK, Martin, Čestmír VLČEK, Jiří VÁVRA, Karel SLAVÍČEK and David GRENAR. Frequency Changes Due to Birefringence in the Optical Polarization Maintaining Fibre Sensor. Hyatt Regency Vancouver, Vancouver, Brit: OSA, 2020, p. 1-6. ISBN 978-1-943580-78-1.

HUSÁK, Martin. Graph-based models in prediction and projection of cyber attacks. In The 1st International Workshop on Graph-based network Security. 2020.

VALENCIA, N.H., V. SRIVASTAV, Matej PIVOLUSKA, M. HUBER, N. FRIIS, W. MCCUTCHEON and M. MALIK. High-Dimensional Pixel Entanglement: Efficient Generation and Certification. QUANTUM. WIEN: VEREIN FORDERUNG OPEN ACCESS PUBLIZIERENS QUANTENWISSENSCHAF, 2020, vol. 4, December, p. 376-394. ISSN 2521-327X. Available from: https://dx.doi.org/10.22331/q-2020-12-24-376.

ČELEDA, Pavel, Jan VYKOPAL, Valdemar ŠVÁBENSKÝ and Karel SLAVÍČEK. KYPO4INDUSTRY: A Testbed for Teaching Cybersecurity of Industrial Control Systems. Online. In Proceedings of the 51st ACM Technical Symposium on Computer Science Education (SIGCSE '20). New York, NY, USA: ACM, 2020, p. 1026-1032. ISBN 978-1-4503-6793-6. Available from: https://dx.doi.org/10.1145/3328778.3366908.

HRUBÁ, Marika. Library advocacy ve vysokoškolské knihovně. 2020.

FRIÁK, Martin, Dušan LAGO, Nikola KOUTNÁ, David HOLEC, Tomáš REBOK and Mojmír ŠOB. Multi-phase ELAStic Aggregates (MELASA) software tool for modeling anisotropic elastic properties of lamellar composites. Computer Physics Communications. Amsterdam: Elsevier, 2020, vol. 247, FEB 2020, p. 1-9. ISSN 0010-4655. Available from: https://dx.doi.org/10.1016/j.cpc.2019.106863.

ČELEDA, Pavel, Andrej TOMČI, Daniel IĽKOVIČ, Matěj GROMAN and Lubomír POSPÍŠIL. Nástroj pro simulaci chování průmyslových komponent (Tool for Simulating of Industrial Components). 2020.

PLESNÍK, Tomáš and Vít RUSŇÁK. Nettmap2 - Interaktivní nástroj pro zobrazení síťové topologie vizualizující data z Flowmon řešení (Nettmap2 - An interactive tool for displaying network topology using data visualization from Flowmon's solution). 2020.

LAŠTOVIČKA, Martin, Martin HUSÁK and Lukáš SADLEK. Network Monitoring and Enumerating Vulnerabilities in Large Heterogeneous Networks. Online. In NOMS 2020 - 2020 IEEE/IFIP Network Operations and Management Symposium. Budapest, Hungary: IEEE Xplore Digital Library, 2020, p. 1-6. ISBN 978-1-7281-4973-8. Available from: https://dx.doi.org/10.1109/NOMS47738.2020.9110394.

VELAN, Petr and Tomáš JIRSÍK. On the Impact of Flow Monitoring Configuration. Online. In 2020 IEEE/IFIP Network Operations and Management Symposium (NOMS 2020). Budapešť: IEEE Xplore Digital Library, 2020, p. 1-7. ISBN 978-1-7281-4973-8. Available from: https://dx.doi.org/10.1109/NOMS47738.2020.9110361.

JELÍNEK, Kamil, Jan ŠLESINGER and Michal PROCHÁZKA. Právní aspekty sdílení dat v rámci informačních technologií konceptu Smart City v dopravě a jejich dopady do práva veřejných zakázek (xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx). 1st ed. Brno: Masarykova univerzita, Právnická fakulta, 2020, 91 pp. Edice Scientia, sv. 702. ISBN 978-80-210-9777-3.

HUSÁK, Martin and Pavel ČELEDA. Predictions of Network Attacks in Collaborative Environment. Online. In NOMS 2020 - 2020 IEEE/IFIP Network Operations and Management Symposium. Budapest, Hungary: IEEE, 2020, p. 1-6. ISBN 978-1-7281-4973-8. Available from: https://dx.doi.org/10.1109/NOMS47738.2020.9110472.

HUSÁK, Martin, Tomáš BAJTOŠ, Jaroslav KAŠPAR, Elias BOU-HARB and Pavel ČELEDA. Predictive Cyber Situational Awareness and Personalized Blacklisting: A Sequential Rule Mining Approach. ACM Transactions on Management Information Systems. Association for Computing Machinery, 2020, vol. 11, No 4, p. 1-16. ISSN 2158-656X. Available from: https://dx.doi.org/10.1145/3386250.

DUDOVÁ, Zdenka, Dalibor VALÍK, Kristína GREPLOVÁ and Alice HÁLOVÁ. Představení BBMRI-CZ jako partnera pro výzkum v oblasti translační medicíny (Introduction of BBMRI-CZ as a research partner for the translational medicine). In 41. Imunoanalytické dny 2020. 2020. ISBN 978-80-88120-28-5.

THERON, Paul, Alexander KOTT, Martin DRAŠAR, Krzysztof RZADCA, Benoît LEBLANC, Mauno PIHELGAS, Luigi MANCINI and Fabio DE GASPARI. Reference Architecture of an Autonomous Agent for Cyber Defense of Complex Military Systems. Online. In Sushil Jajodia, George Cybenko, V.S. Subrahmanian, Vipin Swarup, Cliff Wang, Michael Wellman. Adaptive Autonomous Secure Cyber Systems. Cham: Springer International Publishing, 2020, p. 1-21. ISBN 978-3-030-33432-1. Available from: https://dx.doi.org/10.1007/978-3-030-33432-1_1.

OČENÁŠ, Martin, Ivan HOMOLIAK, Kamil MALINKA and Petr HANÁČEK. Security and Encryption at Modern Databases. In 2020 4TH INTERNATIONAL CONFERENCE ON CRYPTOGRAPHY, SECURITY AND PRIVACY (ICCSP 2020). NEW YORK: ASSOC COMPUTING MACHINERY, 2020, p. 19-23. Available from: https://dx.doi.org/10.1145/3377644.3377662.

MAREK, Jiří. Seminář Open Science. 2020.

DRAŠAR, Martin, Stephen MOSKAL, Shanchieh Jay YANG and Pavol ZAŤKO. Session-level Adversary Intent-Driven Cyberattack Simulator. Online. In Dusan Maga, Jiri Haek. DS-RT '20: Proceedings of the IEEE/ACM 24th International Symposium on Distributed Simulation and Real Time Applications. Praha: IEEE, 2020, p. 7-15. ISBN 978-1-7281-7343-6.

ČELEDA, Pavel, Kamil ANDONIADIS, Attila FARKAS, Jana ZIKOVÁ, Martin MADZIA, Matěj GROMAN, Andrej TOMČI and Lubomír POSPÍŠIL. Simulační prostředí pro testování průmyslových aplikací (Simulation Environment for Testing Industrial Applications). 2020.

ŠPAČEK, Stanislav and Milan ŽIARAN. Software pro aplikaci reaktivních opatření na prvcích aktivní obrany počítačové sítě (Software for the application of reactive measures on devices for active network defense). 2020.

LAŠTOVIČKA, Martin, Jakub Bartolomej KOŠUTH, Daniel FILAKOVSKÝ, Antonín DUFKA and Martin HUSÁK. Software pro evidenci zranitelností v počítačové síti (Software for enumerating vulnerabilities in a computer network). 2020.

VELAN, Petr, Petr ŠPRINGL, Jan FRÜHBAUER, Tomáš JÁNSKÝ and Boris PARÁK. Software pro generování IP toků v cloudovém prostředí (Software for IP flow generation in a cloud environment). 2020.

SADLEK, Lukáš, Michal JAVORNÍK and Martin HUSÁK. Software pro podporu rozhodování při řešení bezpečnostního incidentu (Software for the decision support in the security incident handling). 2020.

VELAN, Petr, Petr ŠPRINGL, Jan FRÜHBAUER and Miloš DOLINSKÝ. Software pro sběr dat z vestavěných monitorovacích služeb cloudových platforem (Software for data collection from built-in monitoring services of cloud platforms). 2020.

HUSÁK, Martin, Tomáš JIRSÍK and Shanchieh Jay YANG. SoK: Contemporary Issues and Challenges to Enable Cyber Situational Awareness for Network Security. Online. In Proceedings of the 15th International Conference on Availability, Reliability and Security. New York, NY, United States: Association for Computing Machinery, 2020, p. 1-10. ISBN 978-1-4503-8833-7. Available from: https://dx.doi.org/10.1145/3407023.3407062.

PLESCH, Martin, Samuel PLESNIK and Natália RUŽIČKOVÁ. The IYPT and the 'Ring Oiler' problem. European Journal of Physics. BRISTOL: Institute of Physics Publishing, 2020, vol. 41, No 3, p. 1-12. ISSN 0143-0807. Available from: https://dx.doi.org/10.1088/1361-6404/ab6414.

TOVARŇÁK, Daniel, Stanislav ŠPAČEK and Jan VYKOPAL. Traffic and Log Data Captured During a Cyber Defense Exercise. Data in Brief. 2020, vol. 31, August, p. 1-11. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2020.105784.

LAŠTOVIČKA, Martin, Stanislav ŠPAČEK, Petr VELAN and Pavel ČELEDA. Using TLS Fingerprints for OS Identification in Encrypted Traffic. Online. In 2020 IEEE/IFIP Network Operations and Management Symposium (NOMS 2020). Budapešť, Maďarsko: IEEE Xplore Digital Library, 2020, p. 1-6. ISBN 978-1-7281-4973-8. Available from: https://dx.doi.org/10.1109/NOMS47738.2020.9110319.

HRUBÁ, Marika. Úvod do library advocacy pro veřejné knihovny : e-learningový kurz. Online. 2020.

MATTA, Lukáš and Martin HUSÁK. Webová aplikace pro vizualizaci bezpečnostní situace v počítačové síti (Web application for the visualization of security situation in computer network). 2020.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL and Pavel ČELEDA. What Are Cybersecurity Education Papers About? A Systematic Literature Review of SIGCSE and ITiCSE Conferences. Online. In Proceedings of the 51st ACM Technical Symposium on Computer Science Education (SIGCSE '20). New York, NY, USA: ACM, 2020, p. 2-8. ISBN 978-1-4503-6793-6. Available from: https://dx.doi.org/10.1145/3328778.3366816.

VODÁK, Rostislav, Michal BÍL, Tomáš SVOBODA, Zuzana KŘIVÁNKOVÁ, Jan KUBEČEK, Tomáš REBOK and Petr HLINĚNÝ. A deterministic approach for rapid identification of the critical links in networks. PLOS ONE. United States: Public Library of Science, 2019, vol. 14, No 7, p. 1-18. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0219658.

STŘELÁK, David, Carlos Óscar S. SORZANO, José María CARAZO and Jiří FILIPOVIČ. A GPU acceleration of 3-D Fourier reconstruction in cryo-EM. The International Journal of High Performance Computing Applications. SAGE Publishing, 2019, vol. 33, No 5, p. 948-959. ISSN 1094-3420. Available from: https://dx.doi.org/10.1177/1094342019832958.

HUSÁK, Martin and Jaroslav KAŠPAR. AIDA Framework: Real-Time Correlation and Prediction of Intrusion Detection Alerts. Online. In Proceedings of the 14th International Conference on Availability, Reliability and Security (ARES 2019). New York: ACM, 2019, p. "81:1"-"81:8", 8 pp. ISBN 978-1-4503-7164-3. Available from: https://dx.doi.org/10.1145/3339252.3340513.

TOVARŇÁK, Daniel. An Algorithm for Message Type Discovery in Unstructured Log Data. Online. In Proceedings of the 14th International Conference on Software Technologies - Volume 1: ICSOFT. Prague: SciTePress, 2019, p. 665-676. ISBN 978-989-758-379-7. Available from: https://dx.doi.org/10.5220/0007919806650676.

VELAN, Petr and Pavel ČELEDA. Application-Aware Flow Monitoring. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 701-706. ISBN 978-1-72810-618-2.

SMERIGA, Juraj and Tomáš JIRSÍK. Behavior-Aware Network Segmentation using IP Flows. Online. In Proceedings of the 14th International Conference on Availability, Reliability and Security. New York, NY, USA: ACM, 2019, p. 1-9. ISBN 978-1-4503-7164-3. Available from: https://dx.doi.org/10.1145/3339252.3339265.

REBOK, Tomáš. Big Data - overview, basic concepts and practical use in research. In Alliance4Life 5th project meeting. 2019.

BOU-HARB, Elias, Martin HUSÁK, Mourad DEBBABI and Chadi ASSI. Big Data Sanitization and Cyber Situational Awareness: A Network Telescope Perspective. IEEE Transactions on Big Data. IEEE, 2019, vol. 5, No 4, p. 439-453. ISSN 2332-7790. Available from: https://dx.doi.org/10.1109/TBDATA.2017.2723398.

ŠTOURAČ, Jan, O. VAVRA, Piia Pauliina KOKKONEN, Jiří FILIPOVIČ, Gabriela Filipa FONSECA PINTO, Andrea SCHENKMAYEROVÁ, Jiří DAMBORSKÝ and David BEDNÁŘ. Caver web: identification of tunnels and channels in proteins and analysis of ligand transport. In European Biotechnology Congress. 2019. ISSN 0168-1656. Available from: https://dx.doi.org/10.1016/j.jbiotec.2019.05.251.

ŠTOURAČ, Jan, Ondřej VÁVRA, Piia Pauliina KOKKONEN, Jiří FILIPOVIČ, José Gaspar RANGEL PAMPLONA PIZARRO PINTO, Jan BREZOVSKÝ, Jiří DAMBORSKÝ and David BEDNÁŘ. Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport. Nucleic acids research. Oxford: Oxford University Press, 2019, vol. 47, W1, p. 414-422. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz378.

VÁVRA, Ondřej, Jiří FILIPOVIČ, Jan PLHÁK, David BEDNÁŘ, Sérgio Manuel MARQUES, Jan BREZOVSKÝ, Jan ŠTOURAČ, Luděk MATYSKA and Jiří DAMBORSKÝ. CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels. Bioinformatics. Oxford: Oxford University Press, 2019, vol. 35, No 23, p. 4986-4993. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btz386.

DRAŠAR, Martin, Ádám RUMAN, Adam SKRÁŠEK and Matúš GALBA. CEP-Server: Software pro vyhodnocování a dotazování komplexních událostí v doméně ITOA (CEP-Server: Software for evaluation and querying of complex events in the ITOA domain). 2019.

ŠPAČEK, Stanislav, Martin LAŠTOVIČKA, Martin HORÁK and Tomáš PLESNÍK. Current Issues of Malicious Domains Blocking. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC: IEEE, 2019, p. 551-556. ISBN 978-1-7281-0618-2.

POLČÁK, Radim. Datenschutz - Tschechien (Data Protection - Czech Republik). In Forgo, Helfrich, Schneider. Betrieblicher Datenschutz. 3rd ed. München: C. H. Beck, 2019, p. 1537-1543. Rechtshandbuch. ISBN 978-3-406-72579-1.

JAVORNÍK, Michal, Jana KOMÁRKOVÁ and Martin HUSÁK. Decision Support for Mission-Centric Cyber Defence. Online. In Proceedings of the 14th International Conference on Availability, Reliability and Security (ARES 2019). New York: ACM, 2019, p. "34:1"-"34:8", 8 pp. ISBN 978-1-4503-7164-3. Available from: https://dx.doi.org/10.1145/3339252.3340522.

KYSELÁK, Martin, Miloslav FILKA, DAvid GRENAR, Karel SLAVÍČEK, Čestmír VLČEK, Milan ČUČKA and Jiří VÁVRA. Defensive perimeter detection by polarization change of the fibre optic signal. In SPIE Remote Sensing Technologies and Applications in Urban Environments. Online. In SPIE Remote Sensing Technologies and Applications in Urban Environments IV. 2019. Strasbourg: SPIE, 2019, p. 1-6. ISBN 978-1-5106-3017-8. Available from: https://dx.doi.org/10.1117/12.2532529.

ŠPAČEK, Stanislav, Vít RUSŇÁK and Anna-Marie DOMBAJOVÁ. DNS Firewall Data Visualization. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC: IEEE, 2019, p. 743-744. ISBN 978-1-7281-0618-2.

ČELEDA, Pavel, Petr VELAN, Benjamin KRÁL and Ondřej KOZÁK. Enabling SSH Protocol Visibility in Flow Monitoring. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 569-574. ISBN 978-1-72810-618-2.

SLAVÍČEK, Karel and Otto DOSTÁL. Ensuring security of a telemedicine project in compliance with GDPR. 2019.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA, Pavel LOUTOCKÝ and Jan ZIBNER. European ICT law - thirteenth edition. Plzeň: Vydavatelství Aleš Čeněk, 2019.

OĽHA, Jaroslav, Jana HOZZOVÁ, Jan FOUSEK and Jiří FILIPOVIČ. Exploiting historical data: pruning autotuning spaces and estimating the number of tuning steps. In Ulrich Schwardmann, Christian Boehme, Dora B. Heras, Valeria Cardellini, Emmanuel Jeannot, Antonio Salis, Claudio Schifanella, Ravi Reddy Manumachu, Dieter Schwamborn, Laura Ricci, Oh Sangyoon, Thomas Gruber, Laura Antonelli, Stephen L. Scott. Lecture Notes in Computer Science. Cham, Switzerland: Springer, Cham, 2019, p. 295-307. ISBN 978-3-030-48339-5. Available from: https://dx.doi.org/10.1007/978-3-030-48340-1_23.

RANGEL PAMPLONA PIZARRO PINTO, José Gaspar, Ondřej VÁVRA, Jiří FILIPOVIČ, Jan ŠTOURAČ, David BEDNÁŘ and Jiří DAMBORSKÝ. Fast Screening of Inhibitor Binding/Unbinding using Novel Software Tool CaverDock. FRONTIERS IN CHEMISTRY. LAUSANNE: FRONTIERS MEDIA SA, 2019, vol. 7, OCT 29 2019, p. 1-14. ISSN 2296-2646. Available from: https://dx.doi.org/10.3389/fchem.2019.00709.

MAMULA, Ondřej, David HRYCEJ, Martin STŘELEC, Tomáš PITNER, František KASL, Václav STUPKA and Filip PROCHÁZKA. Flexibilita známá a neznámá (Flexibility known and unknown). All for Power. Praha: AF POWER agency, a.s., 2019, vol. 13, No 4, p. 57-61. ISSN 1802-8535.

HORÁK, Martin, Václav STUPKA and Martin HUSÁK. GDPR Compliance in Cybersecurity Software: A Case Study of DPIA in Information Sharing Platform. Online. In Proceedings of the 14th International Conference on Availability, Reliability and Security (ARES 2019). New York: ACM, 2019, p. "36:1"-"36:8", 8 pp. ISBN 978-1-4503-7164-3. Available from: https://dx.doi.org/10.1145/3339252.3340516.

DRAŠAR, Martin and Tomáš JIRSÍK. IT Operations Analytics: Root Cause Analysis via Complex Event Processing. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 741-742. ISBN 978-1-72810-618-2.

POLČÁK, Radim. Legitimita automatizovaného zpracování judikatury (Legitimacy of automated processing of case-law). Revue pro právo a technologie. Brno: Masarykova univerzita, 2019, vol. 10, No 20, p. 41-63. ISSN 1804-5383. Available from: https://dx.doi.org/10.5817/RPT2019-2-2.

HRUBÁ, Marika. Library advocacy– efektivní prosazování zájmů knihoven : představení e-learningového kurzu „Úvod do library advocacy pro veřejné knihovny". Praha: Sdružení knihoven ČR, 2019.

MAJOR, Juraj, František BLAHOUDEK, Jan STREJČEK, Miriama JÁNOŠOVÁ and Tatiana ZBONČÁKOVÁ. ltl3tela: LTL to Small Deterministic or Nondeterministic Emerson-Lei Automata. Online. In Yu-Fang Chen, Chih-Hong Cheng, Javier Esparza. Automated Technology for Verification and Analysis - 17th International Symposium, ATVA 2019, Taipei, Taiwan, October 28-31, 2019, Proceedings. Cham (Switzerland): Springer, 2019, p. 357-365. ISBN 978-3-030-31783-6. Available from: https://dx.doi.org/10.1007/978-3-030-31784-3_21.

DOSTÁL, Otto, Karel SLAVÍČEK and Otto DOSTÁL. MeDiMed. Elektrorevue. International Society for Science and Engineering o.s., 2019, vol. 21, No 4, p. 114-119. ISSN 1213-1539.

HORA, Tomáš, Pavel PIPERIS and Karel SLAVÍČEK. Měřící modul pro testování závislosti spektrální citlivosti fotodetektoru na prostředí (Measurement module for testing of dependency of photodetector spectral sensitivity on environment). 2019.

RŮŽIČKA, Michal, Andrea MIRANDA, Lukáš HEJTMÁNEK, Zdeněk VAŠEK, Vlastimil KREJČÍŘ and Miroslav BARTOŠEK. Metodika bitové ochrany digitálních dat (The methodology for bit-level preservation of digital dat). 2019.

HORA, Tomáš, Pavel PIPERIS and Karel SLAVÍČEK. Modul pro měření závislosti optickcýh vlastností infračervené diody na prostředí (Measurement module for testing of dependency of infrared diode transmission specta on environment). 2019.

ČELEDA, Pavel, Jakub ČEGAN, Martin MACHÁČ, Jana MEDKOVÁ, Ivo NUTÁR, Tomáš PLESNÍK, Daniel TOVARŇÁK and Martin VIZVÁRY. Nástroj pro zmírňování a potlačování útoků na kritickou informační infrastrukturu (Tool for mitigation and suppression of attacks on critical information infrastructure). 2019.

ČELEDA, Pavel, Jakub ČEGAN, Martin DRAŠAR, Ivo NUTÁR, Jiří RÁJA, Tomáš REBOK, Andrej TOMČI and Daniel TOVARŇÁK. Nástroje pro ověřování bezpečnosti SW/HW a simulaci útoků na prvky kritické informační infrastruktury (Tools for verification of SW/HW security and simulation of attacks on critical information infrastructure). 2019.

TOVARŇÁK, Daniel and Tomáš PITNER. Normalization of Unstructured Log Data into Streams of Structured Event Objects. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 671-676. ISBN 978-1-72810-618-2.

HRUBÁ, Marika. Pozvání do kurzu Úvod do library advocacy pro veřejné knihovny. Duha. Brno: Moravská zemská knihovna, 2019, vol. 33, No 4, p. 30-31. ISSN 0862-1985.

POLČÁK, Radim. Procedural and Institutional Backing of Transparency in Algorithmic Processing of Rights. Masaryk University Journal of Law and Technology. Brno: Masarykova univerzita, 2019, vol. 13, No 2, p. 401-414. ISSN 1802-5943. Available from: https://dx.doi.org/10.5817/MUJLT2019-2-11.

POLČÁK, Radim. Procesní aspekty elektronické identifikace dle nařízení eIDAS (Procedural issues in electronic identification under the eIDAS). Zpravodaj Jednoty českých právníků. Praha: Jednota českých právníků, 2019, vol. 29, No 4, p. 32-51. ISSN 2464-5982.

POLČÁK, Radim. Procesní aspekty elektronické identifikace dle nařízení eIDAS (Procedural issues in electronic identification under the eIDAS). In Karlovarské právnické dny Společnost českých, německých, slovenských a rakouských právníků, z. s. XXVII. Karlovarské právnické dny. 1st ed. Praha: Leges, 2019, p. 210-229. ISBN 978-80-7502-359-9.

LHOTÁK, Martin, Zdeněk VAŠEK and Michal RŮŽIČKA. Projekt ARCLib – vývoj open-source řešení pro dlouhodobou archivaci digitálních dokumentů pro knihovny a další paměťové instituce – aktuální stav (ARCLib – development of open source system for long-term preservation for library digital collections). In LTP 2019: Nové trendy a východiská pri budovaní LTP archívov: zborník príspevkov zo 4. medzinárodnej konferencie o dlhodobej archivácii. Bratislava: Univerzitná knižnica v Bratislave, 2019, p. 53-63. ISBN 978-80-89303-77-9.

JIRSÍK, Tomáš, Štěpán TRČKA and Pavel ČELEDA. Quality of Service Forecasting with LSTM Neural Network. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 251-260. ISBN 978-1-72810-618-2.

FRIÁK, Martin, Yvonna JIRÁSKOVÁ, David HOLEC, Nikola KOUTNÁ, Ivana MIHÁLIKOVÁ, Anton SLÁVIK, Naděžda PIZÚROVÁ, Ferdinand DOBEŠ, Petr DYMÁČEK, Petr ŠESTÁK, Jan FIKAR, Sabina KOVAŘÍKOVÁ OWEIS, Monika VŠIANSKÁ, Jana PAVLŮ, Vilma BURŠÍKOVÁ, Jörg NEUGEBAUER and Mojmír ŠOB. Quantum-mechanical study of Fe-Al-based intermetallic compounds. In Intermetallics 2019. 2019. ISBN 978-3-948023-07-2.

ČERMÁK, Milan, Martin LAŠTOVIČKA and Tomáš JIRSÍK. Real-time Pattern Detection in IP Flow Data using Apache Spark. Online. In 2019 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Washington DC, USA: IEEE, 2019, p. 521-526. ISBN 978-1-7281-0618-2.

GRENAR, David, Martin KYSELÁK and Karel SLAVÍČEK. Sensor system for measuring temperature changes using alternative detection of polarization changes. Online. In SPIE Future Sensing Technologies. Tokyo: SPIE, 2019, p. 1-3. ISBN 978-1-5106-3111-3. Available from: https://dx.doi.org/10.1117/12.2547319.

ČELEDA, Pavel, Jakub ČEGAN, Kamil ANDONIADIS, Michal BERAN, František HRDINA, Tomáš JIRSÍK, Daniel KOUŘIL, Michal MAZOUREK, Radek OŠLEJŠEK, Michal PROCHÁZKA, Daniel TOVARŇÁK, Petr VELAN, Martin VIZVÁRY, Vadim JANOVSKIJ and Kristína ZÁKOPČANOVÁ. Software pro detekci a analýzu napadení KII (Software for detection and analysis of attacks on critical information infrastructures). 2019.

HUSÁK, Martin, Jaroslav KAŠPAR and Milan ŽIARAN. Software pro inteligentní analýzu bezpečnostních událostí (iABU) (Software for the intelligent analysis of security events (iABU)). 2019.

ČELEDA, Pavel, Jakub ČEGAN, Karolína DOČKALOVÁ BURSKÁ, Jan DUDA, Martin HAMERNÍK, Miroslava JAREŠOVÁ, Erik KOČAMBA, Radek OŠLEJŠEK, Vít RUSŇÁK, Daniel TOVARŇÁK, Hai Duong TRAN, Jan VYKOPAL and Kristína ZÁKOPČANOVÁ. Software pro provádění bezpečnostních cvičení a školení (Software for realization of cybersecurity exercises and trainings). 2019.

ČELEDA, Pavel, Jakub ČEGAN, Kamil ANDONIADIS, Milan ČERMÁK, Jan DUDA, Vlastimil HOLER, Ľuboš HYŽÁK, Boris JADUŠ, Jakub KADAŠI, David LEŠKA, Martin MACHÁČ, Ivo NUTÁR, Radek OŠLEJŠEK, Dominik PILÁR, Tomáš PLESNÍK, Michal PROCHÁZKA, Tomáš REBOK, Vít RUSŇÁK, Miloslav STANĚK, Pavel ŠEDA, Valdemar ŠVÁBENSKÝ, Daniel TOVARŇÁK, Petr VELAN, Martin VIZVÁRY, Jan VYKOPAL and Tatiana ZBONČÁKOVÁ. Software pro simulaci obecných i kritických informačních infrastruktur (Software for simulation of generic and critical information infrastructures). 2019.

HUSÁK, Martin, Jana KOMÁRKOVÁ, Elias BOU-HARB and Pavel ČELEDA. Survey of Attack Projection, Prediction, and Forecasting in Cyber Security. IEEE Communications Surveys & Tutorials. IEEE, 2019, vol. 21, No 1, p. 640-660. ISSN 1553-877X. Available from: https://dx.doi.org/10.1109/COMST.2018.2871866.

BARTOŠ, Václav, Martin ŽÁDNÍK, Pavel KROBOT, Lukáš HUTÁK, Martin HUSÁK, Jaroslav KAŠPAR and Petr VELAN. Systém pro sdílení a analýzu bezpečnostních událostí (System for sharing and analysis of network security alerts). 2019.

VALÍK, Dalibor, Alice HÁLOVÁ, Kristína GREPLOVÁ and Zdenka DUDOVÁ. The Biobanking Research Infrastructure BBMRI-CZ as a Critical Tool to Enhance Translational Cancer Research. In XXXX. Imunoanalytické dny. 2019.

POLČÁK, Radim. The Digitization of czech Cultural Heritage amd New Forms of Information Exclusivity. In Mira T. Sundara Rajan. Intellectual Property in Central and Eastern Europe. Cambridge: Cambridge University Press, 2019, p. 195-207. Cambidge Handbook. ISBN 978-1-107-15636-4.

VELAN, Petr. The Future of Network Flow Monitoring. 2019.

BUDÍK, Pavel. The taming of Masaryk University websites. In EUNIS 2019 Trondheim. 2019.

ŠOB, Mojmír, Martin FRIÁK, Petr ŠESTÁK, Petr ŘEHÁK, Miroslav ČERNÝ, Monika VŠIANSKÁ, Jana PAVLŮ, Ivana MIHÁLIKOVÁ, Anton SLÁVIK, Martina MAZALOVÁ, Vojtěch KOPECKÝ and Nikola KOUTNÁ. THERMODYNAMIC STABILITY AND ELASTIC PROPERTIES OF Fe-Al-BASED SUPERALLOYS. In Karina Pešatová, Barbora Poláková, John Cawley, Zuzana Červenková. SUPERCOMPUTING IN SCIENCE AND ENGINEERING 2017–18. 1st ed. Ostrava: VSB – Technical University of Ostrava, 2019, p. 106-109. ISBN 978-80-248-4289-9.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL and Pavel ČELEDA. Towards Learning Analytics in Cybersecurity Capture the Flag Games. In Proceedings of the 50th ACM Technical Symposium on Computer Science Education (SIGCSE’19). 2019. ISBN 978-1-4503-5890-3. Available from: https://dx.doi.org/10.1145/3287324.3293816.

ČERMÁK, Milan. Trace-Share: Towards Provable Network Traffic Measurement and Analysis. 2019.

MAMULA, Ondřej, David HRYCEJ, Martin STŘELEC, Tomáš PITNER, František KASL, Václav STUPKA and Filip PROCHÁZKA. Uplatnění agregované flexibility pro PpS a na trzích s energiemi bez negativního vlivu na provozní parametry sítí (Applying aggregated flexibility for auxiliary services and energy markets without adversely affecting network operating parameters). Energetika. Praha: Český svaz zaměstnavatelů v energetice, 2019, vol. 69, No 5, p. 308-311. ISSN 0375-8842.

COLLETT, Dominika, Radim POLČÁK, Michal ŠALOMOUN and Terezie VOJTÍŠKOVÁ. Value Gap. 1. vyd. Brno: Masarykova univerzita, 2019, 52 pp. n/a.

POLČÁK, Radim, František KASL, Pavel LOUTOCKÝ, Jakub MÍŠEK and Václav STUPKA. Virtualizace právních vztahů a nové regulatorní metody v pozitivním právu (Virtualization of Legal Relations and New Regulatory Methods in Positive Law). Právník. AV ČR, Ústav státu a práva, 2019, vol. 158, No 1, p. 86-98. ISSN 0231-6625.

OŠLEJŠEK, Radek, Vít RUSŇÁK, Karolína BURSKÁ, Valdemar ŠVÁBENSKÝ and Jan VYKOPAL. Visual Feedback for Players of Multi-Level Capture the Flag Games: Field Usability Study. Online. In Gove R., Arendt D., Kohlhammer J., Angelini M., Lyn Paul, C., Bryan C. McKenna S., Prigent N., Najafi P., Sopan A. 2019 IEEE Symposium on Visualization for Cyber Security (VizSec). Vancouver, BC, Canada: IEEE, 2019, p. 1-11. ISBN 978-1-7281-3876-3. Available from: https://dx.doi.org/10.1109/VizSec48167.2019.9161386.

MORRIS, Chris, Paolo ANDREETTO, Lucia BANCI, Alexandre M J J BONVIN, Grzegorz CHOJNOWSKI, Laura del CANO, José Marıa CARAZO, Pablo CONESA, Susan DAENKE, George DAMASKOS, Andrea GIACHETTI, Natalie E C HALEY, Maarten L HEKKELMAN, Philipp HEUSER, Robbie P JOOSTEN, Daniel KOUŘIL, Aleš KŘENEK, Tomáš KULHÁNEK, Victor S LAMZIN, Nurul NADZIRIN, Anastassis PERRAKIS, Antonio ROSATO, Fiona SANDERSON, Joan SEGURA, Joerg SCHAARSCHMIDT, Egor SOBOLEV, Sergio TRALDI, Mikael E TRELLET, Sameer VELANKAR, Marco VERLATO and Martyn WINN. West-Life: A Virtual Research Environment for structural biology. Journal of Structural Biology: X. 2019, vol. 1, January - March 2019, p. 1-8. ISSN 2590-1524. Available from: https://dx.doi.org/10.1016/j.yjsbx.2019.100006.

PAZÚRIKOVÁ, Jana, Jaroslav OĽHA, Aleš KŘENEK and Vojtěch SPIWOK. Acceleration of Mean Square Distance Calculations with Floating Close Structure in Metadynamics Simulations. arXiv, 2018, 22 pp. arXiv:1801.02362.

HARAŠTA, Jakub, Jaromír ŠAVELKA, František KASL, Adéla KOTKOVÁ, Pavel LOUTOCKÝ, Jakub MÍŠEK, Daniela PROCHÁZKOVÁ, Helena PULLMANNOVÁ, Petr SEMENIŠÍN, Tamara ŠEJNOVÁ, Nikola ŠIMKOVÁ, Michal VOSINEK, Lucie ZAVADILOVÁ and Jan ZIBNER. Annotated Corpus of Czech Case Law for Reference Recognition Tasks. Online. In Sojka, P., Horák, A., Kopeček, I., Pala, K. Text, Speech, and Dialogue: 21st International Conference. Cham: Springer Nature Switzerland AG, 2018, p. 239-250. ISBN 978-3-030-00793-5. Available from: https://dx.doi.org/10.1007/978-3-030-00794-2_26.

HUSÁK, Martin, Nataliia NESHENKO, Morteza SAFAEI POUR, Elias BOU-HARB and Pavel ČELEDA. Assessing Internet-wide Cyber Situational Awareness of Critical Sectors. Online. In Proceedings of the 13th International Conference on Availability, Reliability and Security. Hamburg: ACM, 2018, p. "29:1"-"29:6", 6 pp. ISBN 978-1-4503-6448-5. Available from: https://dx.doi.org/10.1145/3230833.3230837.

LINDEN, Mikael, Michal PROCHÁZKA, Ilkka LAPPALAINEN, Dominik František BUČÍK, Pavel VYSKOČIL, Martin KUBA, Sami SILÉN, Peter BELMANN, Alexander SCZYRBA, Steven NEWHOUSE, Luděk MATYSKA and Tommi NYRÖNEN. Common ELIXIR Service for Researcher Authentication and Authorisation. F1000Research. F1000 Research Ltd., 2018, vol. 7, No 2018, p. 1-16. ISSN 2046-1402. Available from: https://dx.doi.org/10.12688/f1000research.15161.1.

KOMÁRKOVÁ, Jana, Lukáš SADLEK and Martin LAŠTOVIČKA. Community Based Platform for Vulnerability Categorization. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE Xplore Digital Library, 2018, p. nestránkováno, 2 pp. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406125.

KNÍŽEK, Jiří, Lubomír PAVLIŠKA, Václav PROCHÁZKA, Adéla VRTKOVÁ, Ladislav BERÁNEK, Pavel BOUCHAL, Bořivoj VOJTĚŠEK, Rudolf NENUTIL and Martin KUBA. Computation of Identification of a Gnostical Regression Model, Robust to Both Input and Output Disturbances with the Help of Parallel Computing–Basic Version. International Journal of Mathematics and Computation™. CESER, 2018, vol. 29, No 2, p. 29-58. ISSN 0974-5718.

KLODWIG, Jakub. Cookies nowadays situation. In Cyberspace 2018. 2018.

PORTESI, Silvia, Václav STUPKA, Philip ANDERSON, François BEAUVOIS, Efthymios LALAS, Catalin PATRASCU, Andreas SFAKIANAKIS, Silvia SIGNORATO and Koen VAN IMPE. Cooperation between CSIRTs and Law Enforcement: interaction with the Judiciary. Greece: European Union Agency for Network and Information Security, 2018, 102 pp. ISBN 978-92-9204-259-2. Available from: https://dx.doi.org/10.2824/274312.

KOMÁRKOVÁ, Jana, Martin HUSÁK, Martin LAŠTOVIČKA and Daniel TOVARŇÁK. CRUSOE: Data Model for Cyber Situation Awareness. Online. In Proceedings of the 13th International Conference on Availability, Reliability and Security. Hamburg: ACM, 2018, p. "36:1"-"36:10", 10 pp. ISBN 978-1-4503-6448-5. Available from: https://dx.doi.org/10.1145/3230833.3232798.

STŘELÁK, David and Jiří FILIPOVIČ. cuFFTAdvisor. 2018.

LOUTOCKÝ, Pavel, Jakub MÍŠEK and František KASL. Czech Republic. Online. In J.L. da Cruz Vilaça, R. L. Vasconcelos, M. Gorjão-Henriques, A. Saavedra. The internal market and the digital economy: XXVIII FIDE Congress Lisbon/Estoril (23-26 may 2018) Congress proceedings Vol. 1. Coimbra: Almedina, 2018, p. 285-315. Congress proceedings Vol. 1. ISBN 978-972-40-7478-8.

NESHENKO, Nataliia, Martin HUSÁK, Elias BOU-HARB, Pavel ČELEDA, Sameera AL-MULLA and Claude FACHKHA. Data-Driven Intelligence for Characterizing Internet-scale IoT Exploitations. Online. In 2018 IEEE Globecom Workshops. Abu Dhabi: IEEE, 2018, p. 1-7. ISBN 978-1-5386-4920-6. Available from: https://dx.doi.org/10.1109/GLOCOMW.2018.8644468.

RUSŇÁK, Vít, Caroline APPERT, Olivier CHAPUIS and Emmanuel PIETRIGA. Designing Coherent Gesture Sets for Multi-scale Navigation on Tabletops. Online. In Proceedings of the 2018 CHI Conference on Human Factors in Computing Systems. ACM, 2018, 12 pp. ISBN 978-1-4503-5620-6. Available from: https://dx.doi.org/10.1145/3173574.3173716.

ŠVÁBENSKÝ, Valdemar, Jan VYKOPAL, Milan ČERMÁK and Martin LAŠTOVIČKA. Enhancing Cybersecurity Skills by Creating Serious Games. Online. In Proceedings of the 23rd Annual ACM Conference on Innovation and Technology in Computer Science Education (ITiCSE'18). Larnaca, Cyprus: ACM, 2018, p. 194-199. ISBN 978-1-4503-5707-4. Available from: https://dx.doi.org/10.1145/3197091.3197123.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA, Pavel LOUTOCKÝ and Jan ZIBNER. European ICT Law 2018: Texts, Cases, Materials. Brno: Masarykova univerzita, 2018, 404 pp.

OŠLEJŠEK, Radek, Jan VYKOPAL, Karolína BURSKÁ and Vít RUSŇÁK. Evaluation of Cyber Defense Exercises Using Visual Analytics Process. Online. In Proceedings of the 48th IEEE Frontiers in Education Conference (FIE'18). San Jose, California, USA: IEEE, 2018, p. 1-9. ISBN 978-1-5386-1173-9. Available from: https://dx.doi.org/10.1109/FIE.2018.8659299.

SOROKIN, Dmitry, Igor PETERLÍK, Vladimír ULMAN, David SVOBODA, Tereza NEČASOVÁ, Katsiarina MORGAENKO, Lívia EISELLEOVÁ, Lenka TESAŘOVÁ and Martin MAŠKA. FiloGen: A Model-Based Generator of Synthetic 3-D Time-Lapse Sequences of Single Motile Cells with Growing and Branching Filopodia. IEEE Transactions on Medical Imaging. IEEE, 2018, vol. 37, No 12, p. 2630-2641. ISSN 0278-0062. Available from: https://dx.doi.org/10.1109/TMI.2018.2845884.

ŠVÁBENSKÝ, Valdemar and Jan VYKOPAL. Gathering Insights from Teenagers' Hacking Experience with Authentic Cybersecurity Tools. Online. In 2018 IEEE Frontiers in Education Conference (FIE). San Jose, California, USA: IEEE, 2018, p. 1414-1417. ISBN 978-1-5386-1175-3. Available from: https://dx.doi.org/10.1109/FIE.2018.8658840.

ŠVÁBENSKÝ, Valdemar and Jan VYKOPAL. Challenges Arising from Prerequisite Testing in Cybersecurity Games. Online. In Proceedings of the 49th ACM Technical Symposium on Computer Science Education (SIGCSE’18). Baltimore, Maryland, USA: ACM, 2018, p. 56-61. ISBN 978-1-4503-5103-4. Available from: https://dx.doi.org/10.1145/3159450.3159454.

VELAN, Petr. Improving Network Flow Definition: Formalization and Applicability. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE Xplore Digital Library, 2018, p. 1-5. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406203.

KREJČÍŘ, Vlastimil. Indexování a vyhledávání matematických formulí (Math formulae index and search). Online. Praha: Albertina icome Praha, 2018, 6 pp. ISSN 1801-2213.

SALOMONI, Davide, Luciano GAIDO, Isabel Campos PLASENCIA, Jesus E Marco de LUCAS, Peter SOLAGNA, Jorge GOMES, Luděk MATYSKA, P FUHRMAN, Marcus HARDT, Giacinto DONVITO, L DUTKA, Marcin Pl o CIENNIK, Roberto BARBERA, Cristina AIFTIMIEI, Ignacio BLANQUER, Andrea CECCANTI, Mario DAVID, Alvaro Lopez GARCIA, German MOLTO, P ORVIZ, Zdeněk SUSTR, M VILJOEN, Fernando AGUILAR, L ALVES, Alexandre BONVING, Riccardo BRUNO, D DAVIDOVIC, Marco FARGETTA, Yen CHEN, Sandro FIORE, Z KURKCUOGLU, L LLORET, J MARTINS, Alessandra NUZZO, Paola NASSISI, J PINA, Eva SCIACCA, Daniele SPIGA, M TANGARO, Michal URBANIAK, Bas WEGH and T ZOK. INDIGO-DataCloud: A platform to facilitate seamless access to e-infrastructures. Journal of Grid Computing. Springer Science+Business Media B.V., 2018, vol. 16, No 3, p. 381-408. ISSN 1570-7873. Available from: https://dx.doi.org/10.1007/s10723-018-9453-3.

KOTT, Alexander, Paul THERÓN, Luigi V MANCINI, Martin DRAŠAR, Edlira DUSHKU, Günther HEIKO, Markus KONT, Benoît LEBLANC, Agostino PANICO, Mauno PIHELGAS and Krzysztof RZADCA. Initial Reference Architecture of an Intelligent Autonomous Agent for Cyber Defense. 2018.

MYŠKA, Matěj, Michal KOŠČÍK and Jakub MÍŠEK. Intellectual Property On-Line - Exceptions and Limitations. 2018.

PETROVIČ, Filip, Jiří FILIPOVIČ, David STŘELÁK and Jana PAZÚRIKOVÁ. Kernel Tuning Toolkit. 2018.

PIVOLUSKA, Matej, Marcus HUBER and Mehul MALIK. Layered quantum key distribution. Physical Review A. 2018, vol. 97, No 3, p. "032312:1"-"032312:10", 10 pp. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.97.032312.

PLESCH, Martin and Matej PIVOLUSKA. Loss of information in quantum guessing game. New Journal of Physics. IOP publishing, 2018, vol. 20, 07 02 2018, p. "023018:1"-"023018:10", 10 pp. ISSN 1367-2630. Available from: https://dx.doi.org/10.1088/1367-2630/aaa5f8.

LAŠTOVIČKA, Martin, Antonín DUFKA and Jana KOMÁRKOVÁ. Machine Learning Fingerprinting Methods in Cyber Security Domain: Which one to Use?. Online. In IEEE. Proceedings of the 14th International Wireless Communications and Mobile Computing Conference. Limassol, Cyprus: IEEE Xplore Digital Library, 2018, p. 542-547. ISBN 978-1-5386-2070-0. Available from: https://dx.doi.org/10.1109/IWCMC.2018.8450406.

SZCZEPANIK, Petr, Pavel ZAHRÁDKA, Radim POLČÁK, Jakub MACEK, Ivan DAVID, Dominika GALAJDOVÁ, Johana KOTIŠOVÁ, Rudolf LEŠKA, Petr LUPAČ, Tomáš KARGER and Štěpán ŽÁDNÍK. Mapa audiovizuálního pole v České republice z hlediska digitalizace a strategie pro jednotný digitální trh (Map of the audiovisual field in the Czech Republic in terms of digitization and strategy for the digital single market). 1. vyd. Olomouc: Univerzita Palackého v Olomouci, 2018, 93 pp. ISBN 978-80-244-5450-4.

BAVARESCO, Jessica, Natalia Herrera VALENCIA, Claude KLÖCKL, Matej PIVOLUSKA, Paul ERKER, Nicolai FRIIS, Mehul MALIK and Marcus HUBER. Measurements in two bases are sufficient for certifying high-dimensional entanglement. Nature Physics. Nature Publishing Group, 2018, vol. 14, No 10, p. 1032-1040. ISSN 1745-2473. Available from: https://dx.doi.org/10.1038/s41567-018-0203-z.

POLČÁK, Radim, Leoš ŠEVČÍK, Michal KOŠČÍK, Jakub KLODWIG and Petr HOLUB. Metodika aplikace GDPR na výzkumná data v prostředí vysokých škol v ČR (Methodology of GDPR Application to Research Data in Czech Republic Universities). 1. vydání. Brno: Neuveden, 2018, 156 pp. Available from: https://dx.doi.org/10.5281/zenodo.2532860.

SOJKA, Petr, Michal RŮŽIČKA and Vít NOVOTNÝ. MIaS: Math-Aware Retrieval in Digital Mathematical Libraries. Online. In Proceedings of the 27th ACM International Conference on Information and Knowledge Management (CIKM '18). Torino, Italy: Association for Computing Machinery, 2018, p. 1923-1926. ISBN 978-1-4503-6014-2. Available from: https://dx.doi.org/10.1145/3269206.3269233.

PETERLÍK, Igor, David SVOBODA, Vladimír ULMAN, Dmitry SOROKIN and Martin MAŠKA. Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Multiple Mutually Interacting Motile Cells with Filopodia. Online. In Simulation and Synthesis in Medical Imaging. Cham: Springer, 2018, p. 71-79. ISBN 978-3-030-00535-1. Available from: https://dx.doi.org/10.1007/978-3-030-00536-8_8.

SOROKIN, Dmitry, Igor PETERLÍK, Marco TEKTONIDIS, Karl ROHR and Pavel MATULA. Non-rigid Contour-Based Registration of Cell Nuclei in 2-D Live Cell Microscopy Images Using a Dynamic Elasticity Model. IEEE Transactions on Medical Imaging. IEEE, 2018, vol. 37, No 1, p. 173-184. ISSN 0278-0062. Available from: https://dx.doi.org/10.1109/TMI.2017.2734169.

POLČÁK, Radim. Odpovědnost umělé inteligence a budoucnost průmyslu 4.0. In Docuride 2018, Praha. 2018.

POLČÁK, Radim. Odpovědnost umělé inteligence a informační útvary bez právní subjektivity (Liability of AI and information trusts). Bulletin advokacie. Česká advokátní komora, 2018, vol. 2018, No 11, p. 21-28. ISSN 1210-6348.

MÍŠEK, Jakub. Otevřená data a jejich licencování v České republice. In Licencie Creative Commons a ich vyuzitie v praxi. 2018.

MÍŠEK, Jakub. Otevřená data: Současný stav a doporučení pro otevírání. In Otevřená data a otevřené vzdělávací zdroje. 2018.

LAŠTOVIČKA, Martin, Tomáš JIRSÍK, Pavel ČELEDA, Stanislav ŠPAČEK and Daniel FILAKOVSKÝ. Passive OS Fingerprinting Methods in the Jungle of Wireless Networks. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE Xplore Digital Library, 2018, p. nestránkováno, 9 pp. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406262.

LAŠTOVIČKA, Martin and Daniel FILAKOVSKÝ. Passive OS Fingerprinting Prototype Demonstration. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE Xplore Digital Library, 2018, p. nestránkováno, 2 pp. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406128.

STŘELÁK, David and Jiří FILIPOVIČ. Performance analysis and autotuning setup of the cuFFT library. Online. In ACM International Conference Proceeding Series. Limassol, Cyprus: ACM, 2018, p. nestránkováno, 6 pp. ISBN 978-1-4503-6591-8. Available from: https://dx.doi.org/10.1145/3295816.3295817.

MAREK, Martin, Matej BADIN and Martin PLESCH. Physics of the mechanical toy Gee-Haw Whammy Diddle. Scientific Reports. 2018, vol. 8, No 1, p. 1-10. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-018-22079-1.

KLODWIG, Jakub. Právní teorie a praxe cookies. In České právo a informační technologie 2018. 2018.

POLČÁK, Radim, Matěj MYŠKA, Petr HOSTAŠ, František KASL, Tereza KYSELOVSKÁ, Tomáš LECHNER, Pavel LOUTOCKÝ, Jakub MÍŠEK, Jan TOMÍŠEK, Václav STUPKA and Miroslav UŘIČAŘ. Právo informačních technologií (Information Technology Law). Praha: Wolters Kluwer, 2018, 656 pp. Právní monografie. ISBN 978-80-7598-045-8.

MÍŠEK, Jakub. Privacy in Public Space: Conceptual and Regulatory Challenges. Timan, T.; Newell, B. C.; Koops, B.-J. (eds.). Masaryk University Journal of Law and Technology. Masarykova univerzita, 2018, vol. 12, No 1, p. 75-80. ISSN 1802-5943. Available from: https://dx.doi.org/10.5817/MUJLT2018-1-4.

MÍŠEK, Jakub and Jan TOMÍŠEK. Privacy risks of internet advertising and how they are and should be addressed by GDPR and ePrivacy. In Cyberspace 2018. 2018.

KLODWIG, Jakub. Prolomení internetové anonymity aneb Vím, kdo jsi a co máš rád (Breaking Internet anonymity or I know who you are and what you like). Brno: Právo21, z.s., 2018. ISSN 2570-8813.

GALAJDOVÁ, Dominika, František KASL, Pavel LOUTOCKÝ, Jakub MÍŠEK, Tereza NOVOTNÁ, Jan ZIBNER and Veronika ŽOLNERČÍKOVÁ. Přehled aktuální judikatury II/2018 (Overview of the Current Case Law II/2018). Brno: Masarykova univerzita, 2018, p. 65-91.

GALAJDOVÁ, Dominika, František KASL, Pavel LOUTOCKÝ, Jakub MÍŠEK, Anna ŠTEFANIDESOVÁ and Jan ZIBNER. Přehled aktuální judikatury I/2018 (Overview of the Current Case Law I/2018). Brno: Masarykova univerzita, 2018, p. 59-89.

VELAN, Petr, Martin HUSÁK and Daniel TOVARŇÁK. Rapid Prototyping of Flow-Based Detection Methods Using Complex Event Processing. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE Xplore Digital Library, 2018, p. 1-3. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406121.

KLUSÁČEK, Dalibor, Boris PARÁK, Václav CHLUMSKÝ and Lukáš HEJTMÁNEK. Real-life Experience with Private Cloud hosting Heterogeneous Scientific Workloads. Online. In 2018 IEEE/ACM INTERNATIONAL CONFERENCE ON UTILITY AND CLOUD COMPUTING COMPANION (UCC COMPANION). NEW YORK: IEEE, 2018, p. 115-120. ISBN 978-1-72810-359-4. Available from: https://dx.doi.org/10.1109/UCC-Companion.2018.00044.

JIRSÍK, Tomáš. Stream4Flow: Real-time IP Flow Host Monitoring using Apache Spark. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE, 2018, p. 1-2. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406132.

MÍŠEK, Jakub. Sui generis database right: Internal and External exceptions and limitations. In Cyberspace 2018. 2018.

ŠPAČEK, Stanislav and Pavel ČELEDA. Threat Detection Through Correlation of Network Flows and Logs. Online. In Burkhard Stiller. Proceedings of the 12th International Conference on Autonomous Infrastructure, Management and Security (AIMS 2018). Neuveden: IFIP, 2018, p. 6-10. ISBN 978-3-903176-12-6.

JIRSÍK, Tomáš, Štěpán TRČKA and Pavol ZAŤKO. Time Series Analyzer: Software for analysis of performance time series. 2018.

VYKOPAL, Jan, Radek OŠLEJŠEK, Karolína BURSKÁ and Kristína ZÁKOPČANOVÁ. Timely Feedback in Unstructured Cybersecurity Exercises. Online. In Proceedings of Special Interest Group on Computer Science Education, Baltimore, Maryland, USA, February 21–24, 2018(SIGCSE’18). New York, NY, USA: ACM, 2018, p. 173-178. ISBN 978-1-4503-5103-4. Available from: https://dx.doi.org/10.1145/3159450.3159561.

JIRSÍK, Tomáš and Pavel ČELEDA. Toward Real-time Network-wide Cyber Situational Awareness. Online. In NOMS 2018 - 2018 IEEE/IFIP Network Operations and Management Symposium. Taipei, Taiwan: IEEE, 2018, p. 1-7. ISBN 978-1-5386-3416-5. Available from: https://dx.doi.org/10.1109/NOMS.2018.8406166.

THERON, Paul, Alexander KOTT, Martin DRAŠAR, Krzysytof RZADCA, Benoît LEBLANC, Mauno PIHELGAS, Luigi MANCINI and Agostino PANICO. Towards an active, autonomous and intelligent cyber defense of military systems: The NATO AICA reference architecture. Online. In 2018 International Conference on Military Communications and Information Systems (ICMCIS). Warsaw, Poland: IEEE, 2018, p. 1-9. ISBN 978-1-5386-4559-8. Available from: https://dx.doi.org/10.1109/ICMCIS.2018.8398730.

HUSÁK, Martin and Jaroslav KAŠPAR. Towards Predicting Cyber Attacks Using Information Exchange and Data Mining. Online. In 2018 14th International Wireless Communications & Mobile Computing Conference (IWCMC). Limassol: IEEE, 2018, p. 536-541. ISBN 978-1-5386-2070-0. Available from: https://dx.doi.org/10.1109/IWCMC.2018.8450512.

ČERMÁK, Milan, Tomáš JIRSÍK, Petr VELAN, Jana KOMÁRKOVÁ, Stanislav ŠPAČEK, Martin DRAŠAR and Tomáš PLESNÍK. Towards Provable Network Traffic Measurement and Analysis via Semi-Labeled Trace Datasets. Online. In 2018 Network Traffic Measurement and Analysis Conference (TMA). Vienna, Austria: IEEE, 2018, p. 1-8. ISBN 978-3-903176-09-6. Available from: https://dx.doi.org/10.23919/TMA.2018.8506498.

POLČÁK, Radim. Zpracování osobních údajů v justici (Personal data processing in the judiciary). Zpravodaj Jednoty českých právníků. 2018, vol. 28, No 4, p. 39-51. ISSN 2464-5982.

MÍŠEK, Jakub. Zvláštní práva pořizovatele databáze a výjimka úředního díla (Sui Generis Database Right and Official Work Exception). In Konference o šedé literatuře a repozitářích. 2018.

PROYNOVA, Rumyana, Diogo ALEXANDRE, Martin LABLANS, David VAN ENCKEVORT, Sebastian MATE, Niina EKLUND, Kaisa SILANDER, Michael HUMMEL, Petr HOLUB and Frank ÜCKERT. A Decentralized IT Architecture for Locating and Negotiating Access to Biobank Samples. Stud Health Technol Inform. Netherlands: IOS Press, 2017, vol. 243, p. 75-79, 6 pp. ISSN 0926-9630. Available from: https://dx.doi.org/10.3233/978-1-61499-808-2-75.

HUSÁK, Martin and Milan ČERMÁK. A Graph-based Representation of Relations in Network Security Alert Sharing Platforms. Online. In Prosper Chemouil, Edmundo Monteiro, Marinos Charalambides, Edmundo Madeira, Paulo Simões, Stefano Secci, Luciano Paschoal Gaspary, Carlos Raniery P. dos Santos. 2017 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Lisbon: IEEE, 2017, p. 891-892. ISBN 978-3-901882-89-0. Available from: https://dx.doi.org/10.23919/INM.2017.7987399.

ŠPAČEK, Stanislav, Pavel ČELEDA, Martin DRAŠAR and Martin VIZVÁRY. Analyzing an Off-the-Shelf Surveillance Software: Hacking Team Case Study. In Jaroslav Dočkal, Milan Jirsa, Josef Kaderka. SPI 2017 - Security and Protection of Information 2017. Brno: Univerzita obrany, 2017, p. 143-158. ISBN 978-80-7231-414-0.

FILIPOVIČ, Jiří, Filip PETROVIČ and Siegfried BENKNER. Autotuning of OpenCL Kernels with Global Optimizations. Online. In 1st Workshop on Autotuning and Adaptivity Approaches for Energy Efficient HPC Systems (ANDARE'2017). Portland (USA): ACM, 2017, p. nestránkováno, 6 pp. ISBN 978-1-4503-5363-2. Available from: https://dx.doi.org/10.1145/3152821.3152877.

FILIPOVIČ, Jiří, Ondřej VÁVRA, Jan PLHÁK, David BEDNÁŘ, Sérgio Manuel MARQUES, Jan BREZOVSKÝ, Luděk MATYSKA and Jiří DAMBORSKÝ. CaverDock 1.0. 2017.

KNÍŽEK, Jiří, Ladislav BERÁNEK, Pavel BOUCHAL, Bořivoj VOJTĚŠEK, Rudolf NENUTIL, Martin KUBA, Lubomír PAVLIŠKA and Václav PROCHÁZKA. Computation of Kovanic's Expectedness Distributions with the Help of Parallel Computing - Basic Version (with Special References of Health and Environment). INTERNATIONAL JOURNAL OF ECOLOGICAL ECONOMICS & STATISTICS. UTTARAKHAND: CENTRE ENVIRONMENT SOCIAL & ECONOMIC RESEARCH PUBL-CESER, 2017, vol. 38, No 1, p. 96-119. ISSN 0973-1385.

HANYCH, Monika, Markéta ŠTĚPÁNÍKOVÁ, Michal MALANÍK, Martin ŠKOP, Terezie SMEJKALOVÁ, Pavel LOUTOCKÝ and Jakub MÍŠEK. Conference ARGUMENTATION 2017. 2017.

SÝKORA, Martin, Karel SLAVÍČEK and Štěpán GRABOVSKÝ. Dohledový systém satelitní MESH sítě (Management system for satellite MESH network). 2017.

LOUTOCKÝ, Pavel, Tomáš ABELOVSKÝ, Jakub HARAŠTA, František KASL, Alžběta KRAUSOVÁ, Tereza KYSELOVSKÁ, Jakub MÍŠEK, Matěj MYŠKA, Radim POLČÁK, Lucie STRAKOVÁ and Václav STUPKA. Dokumenty ke studiu práva informačních a komunikačních technologií. 2017.

DRAŠAR, Martin and Jana KOMÁRKOVÁ. Estimating Parameters of Target's Detection Methods. Online. In Michal Pechoucek, Alexander Kott. Proceedings of the NATO IST-152 Workshop on Intelligent Autonomous Agents for Cyber Defence and Resilience. Praha: CEUR Workshop Proceedings, 2017, p. 84-89. ISSN 1613-0073.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA and Pavel LOUTOCKÝ. European ICT Law 2017: Texts, Cases, Materials. 2017.

VÝTVAROVÁ, Eva and Jan FOUSEK. Evaluation of community detection algorithms applied to time-series connectivity networks with dynamical structure. In CompleNet'17, Dubrovnik, Croatia. 2017.

HUSÁK, Martin, Milan ČERMÁK, Martin LAŠTOVIČKA and Jan VYKOPAL. Exchanging Security Events: Which And How Many Alerts Can We Aggregate?. Online. In Prosper Chemouil, Edmundo Monteiro, Marinos Charalambides, Edmundo Madeira, Paulo Simões, Stefano Secci, Luciano Paschoal Gaspary, Carlos Raniery P. dos Santos. 2017 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Lisbon: IEEE, 2017, p. 604-607. ISBN 978-3-901882-89-0. Available from: https://dx.doi.org/10.23919/INM.2017.7987340.

RUČKA, Lukáš and Igor PETERLÍK. Fast reconstruction of image deformation field using radial basis function. Online. In 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI). Neuveden: IEEE, 2017, p. 1146-1150. ISBN 978-1-5090-1171-1. Available from: https://dx.doi.org/10.1109/ISBI.2017.7950719.

MÍŠEK, Jakub. Fialová E. Bezkontaktní čipy a ochrana soukromí. Revue pro právo a technologie. Masarykova univerzita, 2017, vol. 8, No 15, p. 109-115. ISSN 1804-5383.

VYKOPAL, Jan and Jakub ČEGAN. Finding Exercise Equilibrium: How to Support the Game Balance at the Very Beginning? 2017. ISBN 978-1-4503-4698-6. Available from: https://dx.doi.org/10.1145/3017680.3022409.

RŮŽIČKA, Michal, Vít NOVOTNÝ, Petr SOJKA, Jan POMIKÁLEK and Radim ŘEHŮŘEK. Flexible Similarity Search of Semantic Vectors Using Fulltext Search Engines. Online. In CEUR Workshop Proceedings, Vol. 1923. Vienna, Austria: Neuveden, 2017, p. 1-12. ISSN 1613-0073.

HENDRIKS, Luuk, Petr VELAN, Ricardo DE O. SCHMIDT, Pieter-Tjerk DE BOER and Aiko PRAS. Flow-Based Detection of IPv6-specific Network Layer Attacks. In Daphne Tuncer, Robert Koch, Rémi Badonnel, Burkhard Stiller. AIMS 2017 - 11th IFIP WG 6.6 International Conference on Autonomous Infrastructure, Management, and Security. Zurich, Switzerland: Springer International Publishing, 2017, p. 137-142. ISBN 978-3-319-60774-0. Available from: https://dx.doi.org/10.1007/978-3-319-60774-0_11.

JIMÉNEZ, Rafael C, Mateusz KUZAK, Monther ALHAMDOOSH, Michelle BARKER, Bérénice BATUT, Mikael BORG, Salvador CAPELLA-GUTIERREZ, Neil Chue HONG, Martin COOK, Manuel CORPAS, Madison FLANNERY, Leyla GARCIA, Josep Ll GELPÍ, Simon GLADMAN, Carole GOBLE, Montserrat González FERREIRO, Alejandra GONZALEZ-BELTRAN, Philippa C GRIFFIN, Björn GRÜNING, Jonas HAGBERG, Petr HOLUB, Rob HOOFT, Jon ISON, Daniel S KATZ, Brane LESKOŠEK, Federico López GÓMEZ, Luis J OLIVEIRA, David MELLOR, Rowland MOSBERGEN, Nicola MULDER, Yasset PEREZ-RIVEROL, Robert PERGL, Horst PICHLER, Bernard POPE, Ferran SANZ, Maria V SCHNEIDER, Victoria STODDEN, Radosław SUCHECKI, Radka SVOBODOVÁ VAŘEKOVÁ, Harry-Anton TALVIK, Ilian TODOROV, Andrew TRELOAR, Sonika TYAGI, Maarten van GOMPEL, Daniel VAUGHAN, Allegra VIA, Xiaochuan WANG, Nathan S WATSON-HAIGH and Crouch STEVE. Four simple recommendations to encourage best practices in research software. F1000Research. 2017, vol. 6, JUN, p. 876-888. ISSN 2046-1402. Available from: https://dx.doi.org/10.12688/f1000research.11407.1.

MEDKOVÁ, Jana, Martin HUSÁK, Martin VIZVÁRY and Pavel ČELEDA. Honeypot Testbed for Network Defence Strategy Evaluation. Online. In Prosper Chemouil, Edmundo Monteiro, Marinos Charalambides, Edmundo Madeira, Paulo Simões, Stefano Secci, Luciano Paschoal Gaspary, Carlos Raniery P. dos Santos. 2017 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Lisbon: IEEE, 2017, p. 887-888. ISBN 978-3-901882-89-0. Available from: https://dx.doi.org/10.23919/INM.2017.7987397.

SOKOL, Pavol, Jakub MÍŠEK and Martin HUSÁK. Honeypots and honeynets: issues of privacy. EURASIP Journal on Information Security. London: Springer Open, 2017, vol. 10, No 4, p. 1-9. ISSN 1687-4161. Available from: https://dx.doi.org/10.1186/s13635-017-0057-4.

POPOVICI, Vlad, Aleš KŘENEK and Eva BUDINSKÁ. Identification of "BRAF-Positive" Cases Based on Whole-Slide Image Analysis. Biomed Research International. New York: HINDAWI LTD, 2017, Neuveden, April, p. nestránkováno, 7 pp. ISSN 2314-6133. Available from: https://dx.doi.org/10.1155/2017/3926498.

PETERLÍK, Igor, Nazim HAOUCHINE, Lukáš RUČKA and Stéphane COTIN. Image-driven Stochastic Identification of Boundary Conditions for Predictive Simulation. Online. In Descoteaux M., Maier-Hein L., Franz A., Jannin P., Collins D., Duchesne S. Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017: 20th International Conference, Quebec City, QC, Canada, September 11-13, 2017, Proceedings, Part II. Cham: Springer, 2017, p. 548-556. ISBN 978-3-319-66184-1. Available from: https://dx.doi.org/10.1007/978-3-319-66185-8_62.

POLČÁK, Radim. Information Society Between Orwell and Zapata: A Czech Perspective on Safe Harbours. In Graeme B. Dinwoodie. Secondary Liability of Internet Service Providers. Heidelberg: Springer International Publishing, 2017, p. 255-273. Ius Comparatum - Global Studies in Comparative Law. ISBN 978-3-319-55028-2. Available from: https://dx.doi.org/10.1007/978-3-319-55030-5.

POLČÁK, Radim and Dan Jerker B. SVANTESSON. Information Sovereignty - Data Privacy, Sovereign Powers and the Rule of Law. 1st ed. Cheltenham: Edward Elgar Publishing, 2017, 268 pp. 2017936584. ISBN 978-1-78643-921-5. Available from: https://dx.doi.org/10.4337/9781786439222.

VÝTVAROVÁ, Eva, Jan FOUSEK, Michal MIKL, Irena REKTOROVÁ and Eva HLADKÁ. Investigating Community Detection Algorithms and their Capacity as Markers of Brain Diseases. Online. In International Symposium on Grids and Clouds (ISGC) 2017. Academia Sinica, Taipei, Taiwan: Proceedings of Science. Taipei; Taiwan: Sissa Medialab Srl, 2017, p. 1-14. ISSN 1824-8039. Available from: https://dx.doi.org/10.22323/1.293.0018.

MÍŠEK, Jakub. Is the Definition of Personal Data Flawed? Hyperlink as Personal Data (Processing). In Dan Svantesson, Dariusz Kloza. Trans-Atlantic Data Privacy Relations as a Challenge for Democracy. Cambridge: Intersentia, 2017, p. 331-346. European Integration and Democracy Series, 4. ISBN 978-1-78068-434-5.

MÍŠEK, Jakub and Pavel LOUTOCKÝ. Kitsch in Legal Argumentation. In Law and Literature Conference. 2017.

VYKOPAL, Jan, Radek OŠLEJŠEK, Pavel ČELEDA, Martin VIZVÁRY and Daniel TOVARŇÁK. KYPO Cyber Range: Design and Use Cases. Online. In Cardoso J.,Cardoso J.,Maciaszek L.,Maciaszek L.,van Sinderen M.,Cabello E. Proceedings of the 12th International Conference on Software Technologies - Volume 1: ICSOFT. Madrid, Spain: SciTePress, 2017, p. 310-321. ISBN 978-989-758-262-2. Available from: https://dx.doi.org/10.5220/0006428203100321.

VÝTVAROVÁ, Eva, Radek MAREČEK, Jan FOUSEK, Ondřej STRÝČEK and Ivan REKTOR. Large-scale cortico-subcortical functional networks in focal epilepsies: The role of the basal ganglia. NeuroImage-Clinical. Oxford: Elsevier BV, 2017, vol. 2017, No 14, p. 28-36. ISSN 2213-1582. Available from: https://dx.doi.org/10.1016/j.nicl.2016.12.014.

VYKOPAL, Jan, Martin VIZVÁRY, Radek OŠLEJŠEK, Pavel ČELEDA and Daniel TOVARŇÁK. Lessons Learned From Complex Hands-on Defence Exercises in a Cyber Range. Online. In 2017 IEEE Frontiers in Education Conference. Indianapolis, IN, USA: IEEE, 2017, p. 1-8. ISBN 978-1-5090-5919-5. Available from: https://dx.doi.org/10.1109/FIE.2017.8190713.

RŮŽIČKA, Michal. Math Information Retrieval for Digital Libraries. Brno: Masaryk University, Faculty of Informatics, 2017, 144 pp. Doctoral Thesis.

KREJČÍŘ, Vlastimil. Mathematics Index and Search in DSpace. In OAI10 DSpace user group meeting (Pre-conference of OAI 10 - The CERN - UNIGE Workshop on Innovations in Scholarly Communication). 2017.

SÝKORA, Martin, Karel SLAVÍČEK and Štěpán GRABOVSKÝ. MESH satelitní terminál (MESH satellite terminal). 2017.

SOROKIN, Dmitry, Igor PETERLÍK, Vladimír ULMAN, David SVOBODA and Martin MAŠKA. Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Motile Cells with Growing Filopodia. Online. In 14th IEEE International Symposium on Biomedical Imaging. Melbourne: IEEE, 2017, p. 822-826. ISBN 978-1-5090-1172-8. Available from: https://dx.doi.org/10.1109/ISBI.2017.7950644.

BARTOŠEK, Miroslav, Michal RŮŽIČKA and Václav STUPKA. Nařízení GDPR a jeho implementace na vysokých školách v ČR – jak na to (GDPR Regulation and its Implementation at Universities in the Czech Republic - how to do it). In EUNIS-CZ. Dopad zavedení novely VŠ zákona do IS vysokých škol. 1st ed. Plzeň: Západočeská univerzita v Plzni, 2017, p. 5-14. ISBN 978-80-261-0713-2.

MEDKOVÁ, Jana, Martin HUSÁK and Martin DRAŠAR. Network Defence Strategy Evaluation: Simulation vs. Live Network. Online. In Prosper Chemouil, Edmundo Monteiro, Marinos Charalambides, Edmundo Madeira, Paulo Simões, Stefano Secci, Luciano Paschoal Gaspary, Carlos Raniery P. dos Santos. 2017 IFIP/IEEE Symposium on Integrated Network and Service Management (IM). Lisbon: IEEE, 2017, p. 81-88. ISBN 978-3-901882-89-0. Available from: https://dx.doi.org/10.23919/INM.2017.7987267.

HUSÁK, Martin, Jaroslav KAŠPAR, Elias BOU-HARB and Pavel ČELEDA. On the Sequential Pattern and Rule Mining in the Analysis of Cyber Security Alerts. Online. In Proceedings of the 12th International Conference on Availability, Reliability and Security. Reggio Calabria: ACM, 2017, p. "22:1"-"22:10", 10 pp. ISBN 978-1-4503-5257-4. Available from: https://dx.doi.org/10.1145/3098954.3098981.

MÍŠEK, Jakub. Open data v. Personal data protection in Czechia. In Cyberspace 2017. 2017.

DRAŠAR, Martin and Pavel MINAŘÍK. Overview and Evaluation of Methods and Tools for Complex Event Processing. 2017, 11 pp.

MOLEK, Pavel and Radim POLČÁK. Poskytnout nebo chránit? (Provide or Protect?). Brno: Nejvyšší správní soud, 2017, 293 pp. ACA Europe. ISBN 978-80-270-1645-7.

MÍŠEK, Jakub and Jakub KLÍMEK. Poskytování otevřených dat z rejstříků osob (Open data publication from the registers of persons). In České právo a informační technologie 2017. 2017.

DOSTÁL, Otto, Otto DOSTÁL and Michal JAVORNÍK. Právní limity nakládání s údaji o zdravotním stavu. In XIII. mezinárodní kongres informačních technologií ve zdravotnictví. 2017.

STUPKA, Václav, Martin HORÁK and Martin HUSÁK. Protection of personal data in security alert sharing platforms. Online. In Proceedings of the 12th International Conference on Availability, Reliability and Security. Reggio Calabria: ACM, 2017, p. "65:1"-"65:8", 8 pp. ISBN 978-1-4503-5257-4. Available from: https://dx.doi.org/10.1145/3098954.3105822.

GALAJDOVÁ, Dominika, František KASL, Pavel LOUTOCKÝ, Jakub MÍŠEK, Helena PULLMANNOVÁ, Anna ŠTEFANIDESOVÁ and Jan ZIBNER. Přehled aktuální judikatury II/2017 (Overview of the Current Case Law II/2017). Brno: Masarykova univerzita, 2017, 15 pp. Revue pro právo a technologie, roč. 8, č. 16. ISSN 1804-5383.

KASL, František, Pavel LOUTOCKÝ, Jakub MÍŠEK, Anna SLÁNSKÁ, Lucie STRAKOVÁ and Anna ŠTEFANIDESOVÁ. Přehled aktuální judikatury I/2017 (Overview of the Current Case Law I/2017). Brno: Masarykova univerzita, 2017, 24 pp. Revue pro právo a technologie, roč. 8, č. 15. ISSN 1804-5383.

PAZÚRIKOVÁ, Jana, Aleš KŘENEK, Vojtěch SPIWOK and Mária ŠIMKOVÁ. Reducing the number of mean-square deviation calculations with floating close structure in metadynamics. Journal of Chemical Physics. Melville: American Institute of Physics, 2017, vol. 146, No 11, p. "115101:1"-"115101:8", 8 pp. ISSN 0021-9606. Available from: https://dx.doi.org/10.1063/1.4978296.

ROČEK, Aleš, Michal JAVORNÍK, Karel SLAVÍČEK and Otto DOSTÁL. Reversible Watermarking in Medical Imaging with Zero Distortion in ROI. Online. In Proceedings of 24th IEEE International Conference on Electronics, Circuits and Systems (ICECS 2017). New York: IEEE, 2017, p. 356-359. ISBN 978-1-5386-1911-7. Available from: https://dx.doi.org/10.1109/ICECS.2017.8292071.

HARAŠTA, Jakub, Jakub MÍŠEK, Monika HANYCH, Pavel LOUTOCKÝ, Michal MALANÍK, Jaromír ŠAVELKA, Markéta ŠTĚPÁNÍKOVÁ and Matěj MYŠKA. Rozměry citací v právu a anotační konvence (Citations in law and convention for annotations). Revue pro právo a technologie. Masarykova univerzita, 2017, vol. 8, No 15, p. 51-73. ISSN 1804-5383. Available from: https://dx.doi.org/10.5817/RPT2017-1-4.

RYGL, Jan, Jan POMIKÁLEK, Radim ŘEHŮŘEK, Michal RŮŽIČKA, Vít NOVOTNÝ and Petr SOJKA. Semantic Vector Encoding and Similarity Search Using Fulltext Search Engines. Online. In Proceedings of the 2nd Workshop on Representation Learning for NLP, RepL4NLP 2017 c/o ACL 2017. Vancouver, Canada: Association for Computational Linguistics, ACL, 2017, p. 81-90. ISBN 978-1-945626-62-3. Available from: https://dx.doi.org/10.18653/v1/W17-2611.

KLUSÁČEK, Dalibor, Boris PARÁK and Lukáš HEJTMÁNEK. Scheduling Challenges in a Shared Private Cloud Infrastructure. CGW Workshop'17 Proceedings. 2017, vol. 2017, No 1, p. 23-24.

LAŠTOVIČKA, Martin and Pavel ČELEDA. Situational Awareness: Detecting Critical Dependencies and Devices in a Network. In Daphne Tuncer, Robert Koch, Rémi Badonnel, Burkhard Stiller. AIMS 2017 - 11th IFIP WG 6.6 International Conference on Autonomous Infrastructure, Management, and Security. Zurich (Switzerland): Springer, 2017, p. 173-178. ISBN 978-3-319-60773-3. Available from: https://dx.doi.org/10.1007/978-3-319-60774-0_17.

POLČÁK, Radim. Stock Exchange Interconnections and Legal Issues in Data Exchange. Masaryk University Journal of Law and Technology. 2017, vol. 7, No 1, p. 351-362. ISSN 1802-5943. Available from: https://dx.doi.org/10.5817/MUJLT2017-2-7.

ŽÁDNÍK, Martin, Jan WRONA, Pavel KROBOT, Pavel MINAŘÍK, Jan BARIENČÍK, Tomáš JIRSÍK, Milan ČERMÁK and Daniel TOVARŇÁK. Systém pro sběr, uchování a analýzu síťových dat velkého rozsahu (System for collecting, storing and analysis of large IP flow data). 2017.

VÝTVAROVÁ, Eva, Jan FOUSEK, Marek BARTOŇ, Radek MAREČEK, Martin GAJDOŠ, Martin LAMOŠ, Marie NOVÁKOVÁ, Tomáš SLAVÍČEK, Igor PETERLÍK and Michal MIKL. The Impact of Diverse Preprocessing Pipelines on Brain Functional Connectivity. Online. In 25th European Signal Processing Conference (EUSIPCO), Kos, Greece. Kos, Greece: IEEE, 2017, p. 2644-2648. ISBN 978-0-9928626-7-1. Available from: https://dx.doi.org/10.23919/EUSIPCO.2017.8081690.

HENDRIKS, Luuk, Petr VELAN, Ricardo DE O SCHMIDT, Pieter-Tjerk DE BOER and Aiko PRAS. Threats and Surprises behind IPv6 Extension Headers. Online. In 2017 Network Traffic Measurement and Analysis Conference (TMA). Dublin, Ireland: IEEE Xplore Digital Library, 2017, p. 1-9. Available from: https://dx.doi.org/10.23919/TMA.2017.8002912.

JIRSÍK, Tomáš, Milan ČERMÁK, Daniel TOVARŇÁK and Pavel ČELEDA. Toward Stream-Based IP Flow Analysis. IEEE Communications Magazine. IEEE, 2017, vol. 55, No 7, p. 70-76. ISSN 0163-6804. Available from: https://dx.doi.org/10.1109/MCOM.2017.1600972.

PITNER, Tomáš, Jan MINISTR, Daniel TOVARŇÁK, Filip KŠENZULIAK and Adam KUČERA. Towards a Common Logging and Monitoring Framework for Critical Infrastructures. In Radek Němec, Lucie Chytilová. Strategic Management and its Support by Information Systems (SMSIS). Ostrava: VŠB - Technical University of Ostrava, 2017, p. 488-495. ISBN 978-80-248-4046-8.

KOŠČÍK, Michal, Radim POLČÁK, Matěj MYŠKA and Jakub HARAŠTA. Výzkumná data a výzkumné databáze. Právní rámec zpracování a sdílení vědeckých poznatků (Research data and research databases. Legal framework for the processing and sharing of scientific findings). 1st ed. Praha: Wolters Kluwer, 2017, 164 pp. Právní monografie. ISBN 978-80-7552-952-7.

PLESCH, Martin, Marcin PAWLOWSKI and Matej PIVOLUSKA. 1-out-of-2 oblivious transfer using a flawed bit-string quantum protocol. Physical Review A. 2017, vol. 95, No 4, p. "042324-1"-"042324-6", 6 pp. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.95.042324.

ROČEK, Aleš, Karel SLAVÍČEK, Otto DOSTÁL and Michal JAVORNÍK. A new approach to fully-reversible watermarking in medical imaging with breakthrough visibility parameters. Biomedical Signal Processing and Control. Elsevier, 2016, vol. 29, No 7, p. 44-52. ISSN 1746-8094. Available from: https://dx.doi.org/10.1016/j.bspc.2016.05.005.

ČERMÁK, Milan, Daniel TOVARŇÁK, Martin LAŠTOVIČKA and Pavel ČELEDA. A Performance Benchmark of NetFlow Data Analysis on Distributed Stream Processing Systems. In Sema Oktug, Mehmet Ulema, Cicek Cavdar, Lisandro Zambenedetti Granville, Carlos Raniery P. dos Santos. NOMS 2016 - 2016 IEEE/IFIP Network Operations and Management Symposium. Istanbul, Turkey: IEEE Xplore Digital Library, 2016, p. 919-924. ISBN 978-1-5090-0223-8. Available from: https://dx.doi.org/10.1109/NOMS.2016.7502926.

FILIPOVIČ, Jiří, Jana PAZÚRIKOVÁ, Aleš KŘENEK and Vojtěch SPIWOK. Accelerated RMSD Calculation for Molecular Metadynamics. In José Évora-Gómez and José Juan Hernandéz-Cabrera. Proceedings of the 2016 European Simulation and Modelling Conference. Ghent, Belgie: EUROSIS - ETI, 2016, p. 278-280. ISBN 978-90-77381-95-3.

POLČÁK, Radim, Jakub MÍŠEK, Pavel LOUTOCKÝ, Jakub HARAŠTA, Václav STUPKA and Tomáš ABELOVSKÝ. Access to Telecommunication Data in Criminal Justice in Czech Republic and Slovakia. In Sieber, U., von zur Mühlen, N (eds.) Access to Telecommunication Data in Criminal Justice. 1st ed. Berlin: Duncker & Humblot, 2016, p. 247-435. Strafrechtliche Forschungsberichte. ISBN 978-3-428-15143-1.

FOUSEK, Jan, Eva VÝTVAROVÁ, Adam MERTEL, Aleš CHALUPA and Eva HLADKÁ. Agent-Based Modelling And Simulation For The Geospatial Network Model Of The Roman World. Online. In International Symposium on Grids and Clouds (ISGC) 2016. Taipei, Taiwan: Proceedings of Science, 2016, p. 1-9. ISSN 1824-8039.

STUPKA, Václav. AMM and Legal Implications for the Electricity Market. Online. In Björn Johansson, Filip Vencovský. BIR 2016 Workshops and Doctoral Consortium. 1684th ed. CEUR-WS.org, 2016. ISSN 1613-0073.

PIVOLUSKA, Matej and Martin PLESCH. An explicit classical strategy for winning a CHSHq game. New Journal of Physics. IOP publishing, 2016, vol. 18, FEB 11 2016, p. nestránkováno, 10 pp. ISSN 1367-2630. Available from: https://dx.doi.org/10.1088/1367-2630/18/2/025013.

STUPKA, Václav. Analýza datového provozu jako prevence kybernetických bezpečnostních incidentů (Analysis of data traffic as a cyber security incidents prevention). Data Security Management. Praha: TATE International s.r.o., 2016, vol. 2016, No 3, p. 44-48. ISSN 1211-8737.

MAYRHOFER, Michaela Th., Petr HOLUB, Andrea WUTTE and Jan-Eric LITTON. BBMRI-ERIC: the novel gateway to biobanks. Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz. 2016, vol. 2016, p. 1-6. ISSN 1437-1588. Available from: https://dx.doi.org/10.1007/s00103-015-2301-8.

LOUTOCKÝ, Pavel and Kamil MALINKA. Bezpečnost ICT ve vnitřních předpisech a školení zaměstnanců (ICT Security in the Internal Regulations and Training of the Employees). Revue pro právo a technologie. Masarykova univerzita, 2016, vol. 7, No 14, p. 45-64. ISSN 1804-5383.

VÝTVAROVÁ, Eva, Radek MAREČEK, Jan FOUSEK and Ivan REKTOR. Combining network and partial least square analyses: epilepsy case study. In 12. Mezinárodní workshop funkční magnetické rezonance, Olomouc. 2016.

RUSŇÁK, Vít, Pavel TROUBIL, Svatoslav ONDRA, Tomáš SKLENÁK, Desana DAXNEROVÁ, Eva HLADKÁ, Pavel KAJABA, Matej MINÁRIK, Peter NOVÁK, Christoph DAMM and Jaromír KALA. CoUnSiL: Collaborative Universe for Remote Interpreting of Sign Language in Higher Education. Online. In Klaus Miesenberger. Computers Helping People with Special Needs: 15th International Conference, ICCHP 2016, Linz, Austria, July 13-15, 2016, Proceedings, Part II. ICCHP 2016. Neuveden: Springer International Publishing, 2016, p. 392-399. ISBN 978-3-319-41267-2. Available from: https://dx.doi.org/10.1007/978-3-319-41267-2_55.

RUSŇÁK, Vít. CoUnSiL: Videoconferencing Environment for Remote Interpreting of Sign Language in Higher Education (Videoconferencing Environment for Remote Interpreting of Sign Language in Higher Education). In Sign Languages in Tertiary Education and Scholarly Publications in Sign Languages. 2016.

KOUKAL, Pavel and Radim POLČÁK. Česko-slovenské symposium Ochranné známky a průmyslové vzory (Czech-Slowak Symposion on the Trademarks and Industrial Designs Protection). 2016.

ČERMÁK, Milan and Pavel ČELEDA. Detecting Advanced Network Threats Using a Similarity Search. In Badonnel, Rémi and Koch, Robert and Pras, Aiko and Drašar, Martin and Stiller, Burkhard. Management and Security in the Age of Hyperconnectivity. 9701st ed. Munich, Germany: Springer International Publishing, 2016, p. 137-141. ISBN 978-3-319-39813-6. Available from: https://dx.doi.org/10.1007/978-3-319-39814-3_14.

KŘENEK, Aleš, Tomáš RAČEK and Jana PAZÚRIKOVÁ. Direct SAXS Curve Fitting with an Ensable of Conformations. In Molecular Machines 2016. 2016.

VÝTVAROVÁ, Eva, Jan FOUSEK and Michal MIKL. Dynamic connectivity. In Educational course NeuroImaging: Mapping the function and structure of brain, Brno. 2016.

MIKL, Michal, Eva VÝTVAROVÁ, Jan FOUSEK, Marek BARTOŇ, Martin GAJDOŠ, Martin LAMOŠ, Tomáš SLAVÍČEK and Radek MAREČEK. Effect of Preprocessing Pipeline on Functional Connectivity Analysis. In 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM), Geneva, Switzerland. 2016.

KOŠČÍK, Michal, Radim POLČÁK, Václav STUPKA, Matěj MYŠKA, Pavel LOUTOCKÝ and Libor KYNCL. European ICT Law 2016: Texts, Cases, Materials. 2016.

VELAN, Petr. EventFlow: Network Flow Aggregation Based on User Actions. In Sema Oktug, Mehmet Ulema, Cicek Cavdar, Lisandro Zambenedetti Granville, Carlos Raniery P. dos Santos. IEEE/IFIP Network Operations and Management Symposium 2016 (NOMS 2016). Istanbul, Turkey: IEEE Xplore Digital Library, 2016, p. 767-771. ISBN 978-1-5090-0222-1. Available from: https://dx.doi.org/10.1109/NOMS.2016.7502895.

PAZÚRIKOVÁ, Jana, Aleš KŘENEK and Luděk MATYSKA. Guided Optimization Method for Fast and Accurate Atomic Charges Computation. In José Évora-Gómez and José Juan Hernandéz-Cabrera. Proceedings of the 2016 European Simulation and Modelling Conference. Ghent, Belgicko: EUROSIS - ETI, 2016, p. 267-274. ISBN 978-90-77381-95-3.

KABÁT, Milan, Vojtěch DAVID, Petr HOLUB and Martin PULEC. High-performance forward error correction: Enabling multi-gigabit flows and beyond on commodity GPU and CPU hardware in presence of packet loss. Future Generation Computer Systems. Amsterdam, The Netherlands: Elsevier Science, 2016, vol. 54, No 1, p. 326 - 335. ISSN 0167-739X. Available from: https://dx.doi.org/10.1016/j.future.2015.04.007.

HUSÁK, Martin, Milan ČERMÁK, Tomáš JIRSÍK and Pavel ČELEDA. HTTPS Traffic Analysis and Client Identification Using Passive SSL/TLS Fingerprinting. EURASIP Journal on Information Security. 2016, vol. 2016, No 1, p. 1-14. ISSN 2510-523X. Available from: https://dx.doi.org/10.1186/s13635-016-0030-7.

GAJDOŠ, Martin, Michal MIKL, Eva VÝTVAROVÁ and Jan FOUSEK. Impact of ROI coverage on representative signals in atlas based parcellations. In 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM), Geneva, Switzerland. 2016.

POLČÁK, Radim. Informace a data v právu (Information and Data in Law). Revue pro právo a technologie. Masarykova univerzita, 2016, vol. 7, No 13, p. 67-91. ISSN 1804-5383.

POLČÁK, Radim, Jakub MÍŠEK, Václav STUPKA, Pavel LOUTOCKÝ and Tomáš ABELOVSKÝ. Interception of electronic communications in the Czech Republic and Slovakia. 1st ed. Brno: Masaryk University, Faculty of Law, 2016, 241 pp. Publications of the Masaryk University, theoretical series, edition Scientia, File No. 573. ISBN 978-80-210-8423-0.

POLČÁK, Radim, Jakub MÍŠEK, Václav STUPKA, Pavel LOUTOCKÝ and Tomáš ABELOVSKÝ. Interception of electronic communications in the Czech Republic and Slovakia. 1st ed. Brno: Masarykova univerzita, 2016, 241 pp. Spisy Právnické fakulty MU (řada teoretická), č. 573. ISBN 978-80-210-8423-0.

HELÁN, Radek, František URBAN and Karel SLAVÍČEK. Jednotka pro vyhodnocování optického inklinometru (Fiber optic inclinometer interrogation unit). 2016.

VÝTVAROVÁ, Eva, Jan FOUSEK and Michal MIKL. Komunitní struktura a předzpracování v sítích funkční konektivity. In 63. Společný sjezd české a slovenské společnosti pro klinickou neurofyziologii, Praha. 2016.

STUPKA, Václav. Kybernetická bezpečnost a ochrana kritických energetických infrastruktur. In 13. Letní škola aplikované informatiky Bedřichov. 2016.

KOZEL, Jiří, Andrea KÝNOVÁ, Petr KOVÁCS, Pavel BOHUMEL and Jan SIKORA. Mapová knihovna munimap (Munimap mapping library). 2016.

RŮŽIČKA, Michal, Petr SOJKA and Martin LÍŠKA. Math Indexer and Searcher under the Hood: Fine-Tuning Query Expansion and Unification Strategies. Online. In Noriko Kando and Kazuaki Kishida and Makoto P. Kato and Shuhei Yamamoto. Proceedings of the 12th NTCIR Conference on Evaluation of Information Access Technologies. Tokyo: National Institute of Informatics, 2-1-2 Hitotsubashi, Chiyoda-ku, Tokyo 101-8430 Japan, 2016, p. 331-337. ISBN 978-4-86049-071-3.

KREJČÍŘ, Vlastimil. Memento – cestování časem na webu (Memento: Time Travel for the Web). Online. In INFORUM 2016: 22. ročník konference o profesionálních informačních zdrojích. Praha: Albertina icome Praha, 2016, p. nestránkováno, 11 pp. ISSN 1801-2213.

RAČEK, Tomáš, Radka SVOBODOVÁ VAŘEKOVÁ, Aleš KŘENEK, Jana PAZÚRIKOVÁ, Stanislav GEIDL and Jaroslav KOČA. NEEMP – nástroj pro parametrizaci EEM. In ENBIK2016. 2016. ISBN 978-80-7080-960-0.

RAČEK, Tomáš, Jana PAZÚRIKOVÁ, Radka SVOBODOVÁ VAŘEKOVÁ, Stanislav GEIDL, Aleš KŘENEK, Francesco Luca FALGINELLA, Vladimír HORSKÝ, Václav HEJRET and Jaroslav KOČA. NEEMP: software for validation, accurate calculation and fast parameterization of EEM charges. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2016, vol. 8, October, p. nestránkováno, 14 pp. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/s13321-016-0171-1.

POLČÁK, Radim. Nejdůležitější dopady všeobecného nařízení o ochraně osobních údajů (GDPR) (Most significant impact of the GDPR into the Czech law). Data Security Management. TATE International s.r.o., 2016, vol. 2016, No 4, p. 22-26. ISSN 1211-8737.

MEDKOVÁ, Jana and Pavel ČELEDA. Network Defence Using Attacker-Defender Interaction Modelling. In Badonnel, R., Koch, R., Pras, A., Drašar, M., Stiller, B. IFIP International Conference on Autonomous Infrastructure, Management and Security. Munich, Germany: Springer International Publishing, 2016, p. 127-131. ISBN 978-3-319-39813-6. Available from: https://dx.doi.org/10.1007/978-3-319-39814-3_12.

VELAN, Petr, Jana MEDKOVÁ, Tomáš JIRSÍK and Pavel ČELEDA. Network Traffic Characterisation Using Flow-Based Statistics. In Sema Oktug, Mehmet Ulema, Cicek Cavdar, Lisandro Zambenedetti Granville, Carlos Raniery P. dos Santos. IEEE/IFIP Network Operations and Management Symposium 2016 (NOMS 2016). Istanbul, Turkey: IEEE Xplore Digital Library, 2016, p. 907-912. ISBN 978-1-5090-0223-8. Available from: https://dx.doi.org/10.1109/NOMS.2016.7502924.

SEDLÁŘ, Milan, Bin JI, Tomáš KRÁTKÝ, Tomáš REBOK and Rostislav HUZLÍK. Numerical and experimental investigation of three-dimensional cavitating flow around the straight NACA2412 hydrofoil. Ocean Engineering. Elsevier Ltd., 2016, vol. 123, No 123, p. 357-382. ISSN 0029-8018. Available from: https://dx.doi.org/10.1016/j.oceaneng.2016.07.030.

JIRSÍK, Tomáš, Milan ČERMÁK and Pavel ČELEDA. On Information Value of Top N Statistics. In 2016 6th International Conference on IT Convergence and Security (ICITCS). USA: Institute of Electrical and Electronic Engineers, 2016, p. 255-259. ISBN 978-1-5090-3764-3. Available from: https://dx.doi.org/10.1109/ICITCS.2016.7740357.

VYKOPAL, Jan and Miloš BARTÁK. On the Design of Security Games: From Frustrating to Engaging Learning. 2016.

PAZÚRIKOVÁ, Jana, Tomáš RAČEK, Stanislav GEIDL, Radka SVOBODOVÁ VAŘEKOVÁ and Aleš KŘENEK. Parametrizace ekvalizace elektronegativity metodou diferenciální evoluce (Parametrization of Electronegativity Equalization Method through Differential Evolution). In ENBIK 2016. 2016.

PLANTEFÈVE, Rosalie, Igor PETERLÍK, Nazim HAOUCHINE and Stéphane COTIN. Patient-Specific Biomechanical Modeling for Guidance During Minimally-Invasive Hepatic Surgery. ANNALS OF BIOMEDICAL ENGINEERING. NEW YORK: SPRINGER, 2016, vol. 44, No 1, p. 139-153. ISSN 0090-6964. Available from: https://dx.doi.org/10.1007/s10439-015-1419-z.

STUPKA, Václav. Pojetí počítačového systému v trestním právu a jeho důsledky pro zajišťování elektronických důkazů (Definition of computer system and its relevance for collection of electronic evidence). In Vybrané aspekty kybernetické kriminality. 2016.

TOVARŇÁK, Daniel. Practical Multi-pattern Matching Approach for Fast and Scalable Log Abstraction. In ICSOFT-EA 2016 - Proceedings of the 11th International Joint Conference on Software Technologies. Lisbon, Portugal: SCITEPRESS, 2016, p. 319-329. ISBN 978-989-758-194-6. Available from: https://dx.doi.org/10.5220/0006006603190329.

POLČÁK, Radim. Práva k datům spravovaným veřejnými knihovnami ve světle změn informačního zákona (Rights to Data Administered by Public Libraries in the Light of the Amendments of the Information Act). Knihovna. Praha: Národní knihovna ČR, 2016, vol. 27, No 1, p. 61-73. ISSN 1801-3252.

MALINKA, Kamil and Jakub HARAŠTA. Právní aspekty sledování využití výpočetní techniky zaměstnancem (Legal issues of monitoring employees' use of ICT). Data Security Management. Praha: Tate International, 2016, vol. 2016, No 4, p. 44-49. ISSN 1211-8737.

POLČÁK, Radim, Jakub HARAŠTA and Václav STUPKA. Právní problémy kybernetické bezpečnosti (Legal issues of cyber security). 1st ed. Brno: Masarykova univerzita, Právnická fakulta, 2016, 215 pp. Spisy PF MU, řada teoretická, Editio Scientia; sv. č. 576. ISBN 978-80-210-8426-1.

POLČÁK, Radim, Jakub HARAŠTA and Václav STUPKA. Právní problémy kybernetické bezpečnosti (Legal issues of cyber security). 1st ed. Brno: Masarykova univerzita, 2016. Spisy PF MU, řada teoretická, Editio Scientia; sv. č. 576. ISBN 978-80-210-8426-1.

HAMZÉ, Noura, Igor PETERLÍK, Stéphane COTIN and Caroline ESSERT. Preoperative trajectory planning for percutaneous procedures in deformable environments. Computerized Medical Imaging and Graphics. Elsevier, 2016, vol. 47, No 1, p. 16-28. ISSN 0895-6111. Available from: https://dx.doi.org/10.1016/j.compmedimag.2015.10.002.

MELICHAR, Marek, Jan HUTAŘ, Michal RŮŽIČKA, Zdeněk HRUŠKA, Zdeněk VAŠEK, Miroslav BARTOŠEK and Martin LHOTÁK. Projekt ArcLib – budování systému pro dlouhodobou archivaci digitálních dat v českých knihovnách (ArcLib Project: Designing Solution for Long-term Preservation in Czech Libraries). IT lib. Bratislava: Centrum vedecko-technických informácií SR, 2016, vol. 20, No 2, p. 13-17. ISSN 1335-793X.

KAČINETZ, Alan and Karel SLAVÍČEK. Prototyp virtualizovatelné řídící platformy (Virtualization capable control platform). 2016.

ČERMÁK, Milan, Tomáš JIRSÍK and Martin LAŠTOVIČKA. Real-time Analysis of NetFlow Data for Generating Network Traffic Statistics using Apache Spark. In Sema Oktug, Mehmet Ulema, Cicek Cavdar, Lisandro Zambenedetti Granville, Carlos Raniery P. dos Santos. NOMS 2016 - 2016 IEEE/IFIP Network Operations and Management Symposium. Istanbul, Turkey: IEEE Xplore Digital Library, 2016, p. 1019-1020. ISBN 978-1-5090-0223-8. Available from: https://dx.doi.org/10.1109/NOMS.2016.7502952.

ROČEK, Aleš, Karel SLAVÍČEK and Michal JAVORNÍK. RONI Size and another Attributes of Representative Sample of Medical Images in Common Hospital Operation, Related to Securing by Watermarking Methods. In Prof. Osama Mohamed Mohamed Ahamed. International Conference on Image Processing, Production and Computer Science (ICIPCS'16). London: URENG, 2016, p. 44-51. ISBN 978-93-84422-62-2.

RYGL, Jan, Petr SOJKA, Michal RŮŽIČKA and Radim ŘEHŮŘEK. ScaleText: The Design of a Scalable, Adaptable and User-Friendly Document System for Similarity Searches : Digging for Nuggets of Wisdom in Text. In Aleš Horák, Pavel Rychlý, Adam Rambousek. Proceedings of the Tenth Workshop on Recent Advances in Slavonic Natural Language Processing, RASLAN 2016. Brno: Tribun EU, 2016, p. 79-87. ISBN 978-80-263-1095-2.

JIRSÍK, Tomáš, Milan ČERMÁK, Daniel TOVARŇÁK, Jakub Samuel PAULOVIČ and Michal ŠTEFÁNIK. Stream4Flow: Software for mining and analysis of the large volumes of network traffic. 2016.

PITNER, Tomáš, Zbyněk KOCUR, Tomáš HÉGR, Václav STUPKA and Barbora BÜHNOVÁ. Studie pro bezpečné poskytování dat z elektroměru zákazníkovi v místě spotřeby (Study for the secure delivery of data from the meter to the customer at the point of consumption). 1st ed. Brno: Česká sdružení regulovaných energetických společností, 2016, 88 pp. (není).

SÝKORA, Martin and Karel SLAVÍČEK. Systém detekce polohy (Posilitioning system). 2016.

SÝKORA, Martin and Karel SLAVÍČEK. Systém orientace antény satelitního terminálu (Satellite terminal antenna orientation system). 2016.

MACHAČ, Zdeněk, Petr LÁZNICKÝ, Jaromír OCELKA and Pavel BOHUMEL. Telefonní síť MU (MU Telephone Network). 2016.

KNÍŽEK, Jiří, Pavel BOUCHAL, Vendula PÁRALOVÁ, Bořivoj VOJTĚŠEK, Rudolf NENUTIL, Ladislav BERÁNEK and Martin KUBA. Tests of Hypotheses in a Set of LC-MS Profiles. International Journal of Engineering and Future Technology. 2016, vol. 2, No 1, p. 45-54. ISSN 2455-6432.

KNÍŽEK, Jiří, Jiří ŠINDELÁŘ, Pavel BOUCHAL, Bořivoj VOJTĚŠEK, Rudolf NENUTIL, Ladislav BERÁNEK and Martin KUBA. Tests of Hypotheses in a Set of Spectral Courses Alias Marker Statistics. Int J Stat Econ. 2016, vol. 17, No 1, p. 50-72. ISSN 0975-556X.

VÝTVAROVÁ, Eva, Jan FOUSEK, Radek MAREČEK, Martin GAJDOŠ, Marek BARTOŇ, Martin LAMOŠ, Tomáš SLAVÍČEK and Michal MIKL. The effects of different preprocessing pipelines on network measures of functional connectivity. In Resting State and Brain Connectivity, Austria, Vienna. 2016.

ŠŤAVOVÁ, Vlasta, Václav MATYÁŠ and Kamil MALINKA. The Challenge of Increasing Safe Response of Antivirus Software Users. In Jan Kofroň, Tomáš Vojnar. Mathematical and Engineering Methods in Computer Science. Švýcarsko: Springer International Publishing,, 2016, p. 133-143. ISBN 978-3-319-29816-0. Available from: https://dx.doi.org/10.1007/978-3-319-29817-7_12.

PIVOLUSKA, Matej, Marcin PAWLOWSKI and Martin PLESCH. Tight bound on the classical value of generalized Clauser-Horne-Shimony-Holt games. Physical Review A. 2016, vol. 94, No 2, p. 022338-22342. ISSN 2469-9926. Available from: https://dx.doi.org/10.1103/PhysRevA.94.022338.

RUSŇÁK, Vít, Lukáš RUČKA and Petr HOLUB. Toward Natural Multi-User Interaction in Advanced Collaborative Display Environments. Future Generation Computer Systems. Amsterdam, The Netherlands: Elsevier Science, 2016, vol. 54, January 2016, p. 313-325. ISSN 0167-739X. Available from: https://dx.doi.org/10.1016/j.future.2015.03.019.

MERINO-MARTINEZ, Roxana, Loreana NORLIN, David VAN ENCKEVORT, Gabriele ANTON, Simone SCHUFFENHAUER, Kaisa SILANDER, Linda MOOK, Petr HOLUB, Raffael BILD, Morris SWERTZ and Jan-Eric LITTON. Towards Global Biobank Integration by Implementation of the Minimum Information About Biobank data Sharing (MIABIS 2.0 Core). Biopreservation and Biobanking. 2016. ISSN 1947-5535. Available from: https://dx.doi.org/10.1089/bio.2015.0070.

BARTOŠEK, Miroslav. Uchování digitálního dědictví a systém Archivematica (Preservation of Digital Heritage and System Archivematica). ITlib. Infotmačné technológie a knižnice. Bratislava: Centrum vedecko-technických informácií SR, 2016, vol. 2016, No 2, p. 32-35. ISSN 1335-793X.

JAKUBIČKA, Martin and Michal PROCHÁZKA. Univerzitní systém pro správu osobních digitálních certifikátů. Plzeň, Česká republika: Západočeská univerzita v Plzni, 2016, p. 10-18, 8 pp. ISBN 978-80-261-0625-8.

BARTOŠEK, Miroslav. Vývoj postoje k vědeckým informacím a modelu otevřeného přístupu (Evolution of the attitude to scholarly information and open access model). In Petra Dědičová, Pavla Rygelová, Jiří Marek, Jan Skůpa. Otevřený přístup k vědeckým informacím : současný stav v České republice a ve světě. První vydání. Brno: Nakladatelství VUTIUM, 2016, p. 14-22. ISBN 978-80-214-5282-4.

STUPKA, Václav. Zajištění a uchování dat (Expedited preservation of data). In České právo a informační technologie 2016. 2016.

VELAN, Petr, Milan ČERMÁK, Pavel ČELEDA and Martin DRAŠAR. A Survey of Methods for Encrypted Traffic Classification and Analysis. International Journal of Network Management. John Wiley & Sons, Ltd., 2015, vol. 25, No 5, p. 355-374. ISSN 1055-7148. Available from: https://dx.doi.org/10.1002/nem.1901.

KŘENEK, Aleš, Karel KUBÍČEK, Richard ŠTEFL and Jiří FILIPOVIČ. Accurate Fitting SAXS Curves with NMR Structure Ensembles. Online. In Simon Lin, Vicky Huang. Proceedings of International Symposium on Grids and Clouds 2015. Pissa: Proceedings of Science, 2015, p. nestránkováno, 9 pp. ISSN 1824-8039.

VYKOPAL, Jan. Break your network. Responsibly. 2015.

STACHOŇ, Zdeněk, Jiří KOZEL and Jan RUSSNÁK. Certifikovaná metodika pro tvorbu metadat pro indexy mapových děl (Certified methodology for metadata of indexed map sheets). 2015.

SOKOL, Pavol, Martin HUSÁK and František LIPTÁK. Deploying Honeypots and Honeynets: Issue of Privacy. In 2015 10th International Conference on Availability, Reliability and Security. Toulouse: IEEE, 2015, p. 397-403. ISBN 978-1-4673-6590-1. Available from: https://dx.doi.org/10.1109/ARES.2015.91.

BARTÁK, Miloš and Jan VYKOPAL. Detekce zranitelností a útoků pomocí NetFlow dat, validace zranitelností na systému FlowMon (Vulnerability and attack detection using NetFlow, vulnerability testing of FlowMon system). Brno: INVEA-TECH a.s., 2015, 25 pp. 20151113.

KOZEL, Jiří, Pavel BOHUMEL, Petr KOVÁCS and Andrea KÝNOVÁ. GIS of Traditional Folk Culture. Geomatics Workbooks. Politecnico di Milano, 2015, vol. 12, July 2015, p. 113-120. ISSN 1591-092X.

PUŠ, Viktor, Petr VELAN, Lukáš KEKELY, Jan KOŘENEK and Pavel MINAŘÍK. Hardware Accelerated Flow Measurement of 100G Ethernet. Online. In Remi Badonnel, Jin Xiao, Shingo Ata, Filip De Turck, Voicu Groza, Carlos Raniery P. dos Santos. IFIP/IEEE International Symposium on Integrated Network Management (IM 2015). Ottawa, Canada: IEEE Xplore Digital Library, 2015, p. 1147-1148. ISBN 978-3-901882-76-0.

VELAN, Petr and Viktor PUŠ. High-Density Network Flow Monitoring. Online. In Remi Badonnel, Jin Xiao, Shingo Ata, Filip De Turck, Voicu Groza, Carlos Raniery P. dos Santos. IFIP/IEEE International Symposium on Integrated Network Management (IM 2015). Ottawa, Canada: IEEE Xplore Digital Library, 2015, p. 996-1001. ISBN 978-3-901882-76-0.

GEIDL, Stanislav, Tomáš BOUCHAL, Tomáš RAČEK, Radka SVOBODOVÁ VAŘEKOVÁ, Václav HEJRET, Aleš KŘENEK, Ruben ABAGYAN and Jaroslav KOČA. High-quality and universal empirical atomic charges for chemoinformatics applications. Journal of Cheminformatics. London: BIOMED CENTRAL LTD, 2015, vol. 7, DEC, p. 1-10. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/s13321-015-0107-1.

TOMÁŠ, Martin, Tomáš REBOK and Christos EFSTATHIOU. Iterative Optimization of a Multi-compartmental Air Quality Modelling System. In Jan Kofroň and Tomáš Vojnar. Tenth Doctoral Workshop on Mathematical and Engineering Methods in Computer Science (MEMICS 2015). první. Brno: MEMICS 2015, 2015, p. 70-81. ISBN 978-80-214-5254-1.

ČELEDA, Pavel, Jakub ČEGAN, Jan VYKOPAL and Daniel TOVARŇÁK. KYPO – A Platform for Cyber Defence Exercises. Online. In STO-MP-MSG-133: M&S Support to Operational Tasks Including War Gaming, Logistics, Cyber Defence. Munich (Germany): NATO Science and Technology Organization, 2015, p. nestránkováno, 12 pp. ISBN 978-92-837-2020-1. Available from: https://dx.doi.org/10.14339/STO-MP-MSG-133-08-doc.

ČEGAN, Jakub, Pavel ČELEDA, Tomáš JIRSÍK, Tomáš PLESNÍK, Michal PROCHÁZKA, Petr VELAN, Jan VYKOPAL, Martin VIZVÁRY, Radek OŠLEJŠEK, Zdenek EICHLER, Dalibor TOTH, Milan ČERMÁK, Jan SOUKAL, Tomáš REBOK, Václav RAČANSKÝ, Ivo NUTÁR and Dušan LAGO. KYPO - Kybernetický polygon (KYPO - Cybernetic Proving Ground). 2015.

DOSTÁL, Otto, Otto DOSTÁL and Michal JAVORNÍK. Legislativní aspekty dalšího rozvoje v oblasti telemedicíny. In XI. mezinárodní kongres informačních technologií ve zdravotnictví. 2015.

ČEGAN, Jakub and Martin VIZVÁRY. Lessons Learned from KYPO – Cyber Exercise & Research Platform Project. Online. In Milan Jirsa, Josef Kaderka, Ladislav Hagara, Jaroslav Dočkal. Security and Protection of Information. Brno: University of Defence, 2015, p. 15-26. ISSN 2336-5587.

MALACH, Roman, Daniel DRÁPALA, Roman DOUŠEK, Alena KŘÍŽOVÁ, Martina PAVLICOVÁ, Miroslav VÁLKA, Jitka SPURNÁ, Andrea KÝNOVÁ, Petr KOVÁCS, Pavel BOHUMEL, Jiří KOZEL, Jana MALECKÁ, Marie NOVOTNÁ, Terézia GABRHELOVÁ, Anna HORÁKOVÁ, Daniela KOSTRHOUNOVÁ, Veronika KUTHANOVÁ, Barbora MACHOVÁ, Eva ŠIPÖCZOVÁ and Barbora VALEŠOVÁ. Mapa bibliografických informací tradiční lidové kultury (Map of bibliographic information of traditional folk culture). 2015.

TROUBIL, Pavel, Hana RUDOVÁ and Petr HOLUB. Multicast Routing for High-Quality Multimedia Environments: Deployment and New Problems. Online. In Ingo Schwab, Leo van Moergestel, Gil Gonçalves. INTELLI 2015, The Fourth International Conference on Intelligent Systems and Applications. USA: IARIA, 2015, p. 61-65. ISBN 978-1-61208-437-4.

RUSŇÁK, Vít, Lukáš RUČKA, Pavel KAJABA, Desana DAXNEROVÁ, Matej MINÁRIK, Jiří KAREŠ, Michal BÁBEL and Petr HOLUB. MUSE framework 2.0. 2015.

HUSÁK, Martin, Milan ČERMÁK, Tomáš JIRSÍK and Pavel ČELEDA. Network-based HTTPS Client Identification Using SSL/TLS Fingerprinting. In 2015 10th International Conference on Availability, Reliability and Security. Toulouse: IEEE, 2015, p. 389-396. ISBN 978-1-4673-6590-1. Available from: https://dx.doi.org/10.1109/ARES.2015.35.

SPIWOK, Vojtěch, Pavel OBORSKÝ, Jana PAZÚRIKOVÁ, Aleš KŘENEK and Blanka KRÁLOVÁ. Nonlinear vs. linear biasing in Trp-cage folding simulations. Journal of the chemical society. Faraday transactions II, Journal of chemical physics. London: Chemical society, 2015, vol. 142, No 11, p. nestránkováno, 8 pp. ISSN 0021-9606. Available from: https://dx.doi.org/10.1063/1.4914828.

HELÁN, Radek, František URBAN and Karel SLAVÍČEK. Optický vláknový inklinometr s Braggovými mřížkami (Fiber optic inclinometer with fiber Bragg gratings). 2015.

FILIPOVIČ, Jiří, Matúš MADZIN, Jan FOUSEK and Luděk MATYSKA. Optimizing CUDA code by kernel fusion: application on BLAS. The Journal of Supercomputing. Springer US, 2015, vol. 71, No 10, p. 3934-3957. ISSN 0920-8542. Available from: https://dx.doi.org/10.1007/s11227-015-1483-z.

POLČÁK, Radim, Zdeněk ŘÍHA and Kamil MALINKA. Právní aspekty interních instrukcí – část II. (Legal aspects of internal directives - part II.). Data Security Management. Praha: TATE International s.r.o., 2015, XIX., 3., p. 36-38. ISSN 1211-8737.

POLČÁK, Radim, Zdeněk ŘÍHA and Kamil MALINKA. Právní aspekty interních směrnic – část I. (Legal aspects of internal directives - part I.). Data Security Management. Praha: TATE International s.r.o., 2015, XIX., 2., p. 36-39. ISSN 1211-8737.

PROCHÁZKA, Filip, Tomáš REBOK and Aleš FARDA. První návrh cílové infrastruktury pro provoz systému IRIS (First draft of the target infrastructure for the IRIS system operation). 2015.

NGUYEN, Filip, Tomáš REBOK, Richard LUDVIGH and Václav TUNKA. Ruby Benchmark Suite using Docker. Online. In M. Ganzha, L. Maciaszek, M. Paprzycki. Annals of Computer Science and Information Systems, Volume 5. 2015th ed. Poland: IEEE, 2015, p. 947-952. ISBN 978-83-60810-66-8. Available from: https://dx.doi.org/10.15439/2015F99.

HUSÁK, Martin, Petr VELAN and Jan VYKOPAL. Security Monitoring of HTTP Traffic Using Extended Flows. In 2015 10th International Conference on Availability, Reliability and Security. Toulouse: IEEE, 2015, p. 258-265. ISBN 978-1-4673-6590-1. Available from: https://dx.doi.org/10.1109/ARES.2015.42.

ČEGAN, Jakub, Pavel ČELEDA, Tomáš JIRSÍK, Tomáš PLESNÍK, Michal PROCHÁZKA, Petr VELAN, Jan VYKOPAL, Martin VIZVÁRY, Milan ČERMÁK, Jan SOUKAL, Tomáš REBOK, Ivo NUTÁR and Dušan LAGO. Software pro konfiguraci a monitorování virtuálního prostředí KYPO (Software for configuration and monitoring of KYPO environment). 2015.

OŠLEJŠEK, Radek, Zdenek EICHLER, Dalibor TOTH, Pavel ČELEDA, Jakub ČEGAN, Tomáš JIRSÍK, Tomáš PLESNÍK, Michal PROCHÁZKA, Petr VELAN, Martin VIZVÁRY and Jan VYKOPAL. Software pro vizualizaci virtuálního prostředí KYPO (Software for visualization of KYPO environment). 2015.

STACHOŇ, Zdeněk, Milan KONEČNÝ and Jiří KOZEL. Specializovaná mapa s odborným obsahem - Klady listů vybraných mapových děl na území ČR (Specialized Map with expert content - Map sheet layout of the selected map series in the Czech Republic). 2015.

PAVOL, Sokol, Kleinová LENKA and Martin HUSÁK. Study of attack using honeypots and honeynets lessons learned from time-oriented visualization. Online. In EUROCON 2015 - International Conference on Computer as a Tool (EUROCON), IEEE. Salamanca, Spain: IEEE, 2015, p. 225-230. ISBN 978-1-4799-8569-2. Available from: https://dx.doi.org/10.1109/EUROCON.2015.7313713.

JANČA, Radim, Kamil MALINKA and Vlasta ŠŤAVOVÁ. Systém pro distribuci dotazníků v počítačových učebnách (The system for questionnaire distribution in computer study rooms). 2015.

KOUŘIL, Daniel, Marcel POUL and Michal PROCHÁZKA. Using PKI to Provide Credential Delegation in non Web-based Federations. In Proceedings of the International Conference on Information Science and Applications, Lecture Notes in Electrical Engineering. Pattaya, Thailand: Springer Berlin Heidelberg, 2015, p. 525-532. ISBN 978-3-662-46577-6. Available from: https://dx.doi.org/10.1007/978-3-662-46578-3_62.

PŘENOSIL, Václav, František CVACHOVEC, Pavel ČELEDA and Martin VEŠKRNA. Uspořádání vícecestného dvouparametrického spektrometrického systému (Arrangement of two-parameter multipath spectrometric system). 2015.

SLOVÁK, Petr, Petr HOLUB and Pavel TROUBIL. Videokonferenční prostředí pro komunikaci vzdálených skupin a způsob komunikace vzdálených skupin v systému videokonferenčního prostředí (Videoconferencing Environment for Remote Group Collaboration and Communication Mode of Remote Groups in a Videoconferencnig System Environment). 2015.

DOSTÁL, Otto and Petr BĚLÍK. Výzkum a vývoj integrace kamerových systémů do medicínského prostředí (C-MED) (Research, development and integration of CCTV systems into medical environment (C-MED)). 2015.

DOSTÁL, Otto and Petr BĚLÍK. Výzkum a vývoj integrace kamerových systémů do medicínského prostředí (C-MED) (Research, development and integration of CCTV systems into medical environment (C-MED) (). 2015.

JAVORNÍK, Michal, Otto DOSTÁL and Aleš ROČEK. Watermarking in Regional Medical Imaging. Online. In Valeri Mladenov, Elias Giacoumidis, Jinlong Wei. Proceedings of the 13th International Conference on Data Networks, Communications, Computers. Hungary: World Scientific and Engineering Academy and Society, 2015, p. 222-226. ISBN 978-1-61804-355-9.

PROCHÁZKA, Michal. Závěrečná zpráva STORK e-Academia pilot (STORK e-Academia pilot final report). Brno: Masarykova univerzita, 2015, 29 pp.

JIRSÍK, Tomáš, Martin HUSÁK, Pavel ČELEDA and Zdenek EICHLER. Cloud-based Security Research Testbed: A DDoS Use Case. In Hanan Lutfiyya and Piotr Cholda. Proceedings of the Network Operations and Management Symposium (NOMS 2014). Krakow, Poland: IEEE Xplore Digital Library, 2014, p. 1-2. ISBN 978-1-4799-0912-4. Available from: https://dx.doi.org/10.1109/NOMS.2014.6838272.

KOUŘIL, Daniel, Tomáš REBOK, Tomáš JIRSÍK, Jakub ČEGAN, Martin DRAŠAR, Martin VIZVÁRY and Jan VYKOPAL. Cloud-based Testbed for Simulation of Cyber Attacks. In Hanan Lutfiyya and Piotr Cholda. Proceedings of the Network Operations and Management Symposium (NOMS 2014). Krakow, Poland: IEEE Xplore Digital Library, 2014, p. 1-6. ISBN 978-1-4799-0913-1. Available from: https://dx.doi.org/10.1109/NOMS.2014.6838298.

ČERMÁK, Milan, Pavel ČELEDA and Jan VYKOPAL. Detection of DNS Traffic Anomalies in Large Networks. In Yvon Kermarrec. Advances in Communication Networking, Lecture Notes in Computer Science, Vol. 8846. Heidelberg: Springer International Publishing, 2014, p. 215-226. ISBN 978-3-319-13487-1. Available from: https://dx.doi.org/10.1007/978-3-319-13488-8_20.

PIVOLUSKA, Matej and Martin PLESCH. Device Independent Random Number Generation. Acta physica slovaca. Bratislava: Institute of Physics, SAS, 2014, vol. 64, No 6, p. 601-665. ISSN 0323-0465. Available from: https://dx.doi.org/10.2478/apsrt-2014-0006.

PLESCH, Martin and Matej PIVOLUSKA. Device-independent randomness amplification with a single device. Physics Letters A. Elsevier, 2014, vol. 378, No 40, p. 2938-2944. ISSN 0375-9601. Available from: https://dx.doi.org/10.1016/j.physleta.2014.08.007.

BOUDA, Jan, M. PAWLOWSKI, Matej PIVOLUSKA and Martin PLESCH. Device-independent randomness extraction for arbitrarily weak min-entropy source. Online. In Gruneisen, MT Dusek, M Rarity, JG Lewis, KL Hollins, RC Merlet, TJ Toet, A. EMERGING TECHNOLOGIES IN SECURITY AND DEFENCE II AND QUANTUM-PHYSICS-BASED INFORMATION SECURITY III. BELLINGHAM: SPIE-INT SOC OPTICAL ENGINEERING, 2014, p. "SPIE"-"5", 6 pp. ISBN 978-1-62841-317-5. Available from: https://dx.doi.org/10.1117/12.2071568.

BOUDA, Jan, Marcin PAWLOWSKI, Matej PIVOLUSKA and Martin PLESCH. Device-independent randomness extraction from an arbitrarily weak min-entropy source. Phys. Rev. A. USA: The American Physical Society, 2014, vol. 90, No 3, p. 032313-32318. ISSN 1050-2947. Available from: https://dx.doi.org/10.1103/PhysRevA.90.032313.

SLAVÍČEK, Karel, Otto DOSTÁL and Vladimír SCHINDLER. DWY Time Series Decomposition Model. In International Conference on Software, Electronics & Industrial Engineering. Pattaya, Thailand: Planetary Scientific Research Centre, 2014, p. 27-30. ISBN 978-93-84468-10-1.

DRAŠAR, Martin, Tomáš JIRSÍK and Martin VIZVÁRY. Enhancing Network Intrusion Detection by Correlation of Modularly Hashed Sketches. In Sperotto, Anna and Doyen, Guillaume and Latré, Steven and Charalambides, Marinos and Stiller, Burkhard. Monitoring and Securing Virtualized Networks and Services, Lecture Notes in Computer Science, Vol. 8508. Berlin: Springer Berlin Heidelberg, 2014, p. 160-172. ISBN 978-3-662-43861-9. Available from: https://dx.doi.org/10.1007/978-3-662-43862-6_19.

JIRSÍK, Tomáš and Pavel ČELEDA. Enhancing Network Security: Host Trustworthiness Estimation. In Anna Sperotto, Guillaume Doyen, Steven Latré, Marinos Charalambides, Burkhard Stiller. Monitoring and Securing Virtualized Networks and Services, Lecture Notes in Computer Science, Vol. 8508. Heidelberg: Springer Berlin / Heidelberg, 2014, p. 63-68. ISBN 978-3-662-43861-9. Available from: https://dx.doi.org/10.1007/978-3-662-43862-6_8.

HOFSTEDE, Rick, Pavel ČELEDA, Brian TRAMMELL, Idilio DRAGO, Ramin SADRE, Anna SPEROTTO and Aiko PRAS. Flow Monitoring Explained: From Packet Capture to Data Analysis With NetFlow and IPFIX. IEEE COMMUNICATIONS SURVEYS AND TUTORIALS. PISCATAWAY: IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC, 2014, vol. 16, No 4, p. 2037-2064. ISSN 1553-877X. Available from: https://dx.doi.org/10.1109/COMST.2014.2321898.

PLESCH, Martin, Oscar DAHLSTEN, John GOOLD and Vlatko VEDRAL. Maxwell's Daemon: Information versus Particle Statistics. Scientific Reports. LONDON: Nature Publishing Group, 2014, vol. 4, No 1, p. 1-20, 7 pp. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/srep06995.

VELAN, Petr and Pavel ČELEDA. Next Generation Application-Aware Flow Monitoring. In Anna Sperotto, Guillaume Doyen, Steven Latré, Marinos Charalambides, Burkhard Stiller. Monitoring and Securing Virtualized Networks and Services, Lecture Notes in Computer Science, Vol. 8508. Heidelberg: Springer Berlin / Heidelberg, 2014, p. 173-178. ISBN 978-3-662-43861-9. Available from: https://dx.doi.org/10.1007/978-3-662-43862-6_20.

DRAŠAR, Martin, Martin VIZVÁRY and Jan VYKOPAL. Similarity as a central approach to flow-based anomaly detection. International Journal of Network Management. John Wiley & Sons, Ltd., 2014, vol. 24, No 4, p. 318-336. ISSN 1055-7148. Available from: https://dx.doi.org/10.1002/nem.1867.

GHAFIR, Ibrahim, Jakub SVOBODA and Václav PŘENOSIL. Tor-based Malware and Tor Connection Detection. In Proceedings of International Conference on Frontiers of Communications, Networks and Applications. Kuala Lumpur, Malaysia: IET, 2014, p. 1-6. ISBN 978-1-78561-072-1. Available from: https://dx.doi.org/10.1049/cp.2014.1411.

SLAVÍČEK, Karel, Otto DOSTÁL, Michal JAVORNÍK, Aleš ROČEK, Vladimír ZATLOUKAL and Petr SEDLÁK. Zálohovací a dohledový systém pro InstantPACS (Backup and monitoring system for InstantPACS). 2014.

DOSTÁL, Otto, Karel SLAVÍČEK, Vladimír SCHINDLER, Daniel TOVARŇÁK, Filip PROCHÁZKA and Miroslav GURIČAN. Analýza vývoje telekomunikací pro ČEZ Distribuční služby, s.r.o. (Analysis of the development of telecommunications for CEZ Distribution Services Ltd.). Brno: ČEZ Distribuční služby, s.r.o., 2013, 55 pp. Výzkumná zpráva 112013.

PLESCH, Martin, Oscar DAHLSTEN, John GOOLD and Vlatko VEDRAL. Comment on “Quantum Szilard Engine”. Physical Review Letters. New York: American Physical Society, 2013, vol. 111, No 18, p. 188901. ISSN 0031-9007. Available from: https://dx.doi.org/10.1103/PhysRevLett.111.188901.

JAVORNÍK, Michal, Karel SLAVÍČEK and Otto DOSTÁL. Integration Concept in Regional Medical Imaging. In Joyce deng. Koncept integrace regionálního zpracování medicínských obrazových informací. Singapore: IACSIT Press, 2013, p. 26-31. ISBN 978-981-07-8391-4.

SLAVÍČEK, Karel, Vladimír SCHINDLER, Otto DOSTÁL and Martin SÝKORA. Kalman filter improvement for gyroscopic mouse movement smoothing. In Z. Thaweesak, P.S. Sandhu. IIE Int'l Proceedings of International Conference on Research in Science, Engineering and Technology. Kuala Lumpur: International Institute of Engineers, 2013, p. 43-48. ISBN 978-93-82242-47-5.

SLAVÍČEK, Karel, Michal JAVORNÍK and Otto DOSTÁL. MEDIMED Shared Regional PACS Center. In Dongqing Wang. COMPUTED TOMOGRAPHY. 1st ed. Croatia: InTech, 2013, p. 43-62. ISBN 978-953-51-1102-3.

BOUDA, Jan, Matej PIVOLUSKA, Martin PLESCH and Colin WILMOTT. Encryption with weakly random keys using a quantum ciphertext. In Proceedings of The 12th Asian Conference on Quantum Information Science (AQIS 2012), 2012. 2012.

SLAVÍČEK, Karel, Michal JAVORNÍK and Otto DOSTÁL. Extension of the Shared Regional PACS CenterMeDiMed to Smaller Healthcare Institutions. In Pascal Lorenz; Tibor Gyires; Iwona Pozniak-Koszalka. The Eleventh International Conference on Networks. Saint Gilles, Reunion Island: IARIA, 2012, p. 83-87. ISBN 978-1-61208-183-0.

DOSTÁL, Otto, Karel SLAVÍČEK, Michal JAVORNÍK and Pavel BUDIŠ. ICT Systems Monitoring. Saarbrucken: LAMBERT Academic Publishing, 2012, 167 pp. ISBN 978-3-8473-7231-8.

BOUDA, Jan, Matej PIVOLUSKA and Martin PLESCH. Improving the Hadamard extractor. Theoretical Computer Science. Amsterdam: Elsevier, 2012, vol. 459, 9 Nov 2012, p. 69-76. ISSN 0304-3975. Available from: https://dx.doi.org/10.1016/j.tcs.2012.07.030.

JAVORNÍK, Michal, Karel SLAVÍČEK and Otto DOSTÁL. Sharing of knowledge and resources in regional medical imaging. In 2nd International Conference on Biomedical Engineering & Assistive Technologies. Jalandhar: Dr. B. R. AMBEDKAR NATIONAL INSTITUTE OF TECHNOLOGY JALANDHAR – 144 011, India, 2012, p. 304-308. ISBN 978-81-925454-1-7.

BOUDA, Jan, Matej PIVOLUSKA, Martin PLESCH and Colin WILMOTT. Weak randomness completely trounces the security of QKD. In Proceedings of The 12th Asian Conference on Quantum Information Science (AQIS 2012). 2012.

BOUDA, Jan, Matej PIVOLUSKA, Martin PLESCH and Colin WILMOTT. Weak randomness seriously limits the security of quantum key distribution. Physical Review A. New York: American physical society, 2012, vol. 86, No 6, p. 0623081-0623085. ISSN 1050-2947. Available from: https://dx.doi.org/10.1103/PhysRevA.86.062308.