Publication Records

KHAN, Rayyan Tariq, Petra POKORNÁ, Jan DVORSKÝ, Simeon BORKO, Ihor AREFIEV, Joan PLANAS IGLESIAS, Adam DOBIÁŠ, José Gaspar RANGEL PAMPLONA PIZARRO PINTO, Veronika SZOTKOWSKÁ, Jaroslav ŠTĚRBA, Ondřej SLABÝ, Jiří DAMBORSKÝ, Stanislav MAZURENKO and David BEDNÁŘ. A computational workflow for analysis of missense mutations in precision oncology. JOURNAL OF CHEMINFORMATICS. ENGLAND: BMC, 2024, vol. 16, No 1, p. 1-10. ISSN 1758-2946. Available from: https://dx.doi.org/10.1186/s13321-024-00876-3.

ŠTIKA, Jiří, Michaela PEŠOVÁ, Kateřina STAŇO KOZUBÍK, Magdalena SKALNÍKOVÁ, Lenka DOSTÁLOVÁ, Tomas LOJA, Lenka RADOVÁ, Veronika PALUŠOVÁ, Kamila RÉBLOVÁ, Zuzana VRZALOVÁ, Ivona BLAHÁKOVÁ, Jakub TRIZULJAK, Stjepan ULDRIJAN, Jan BLATNÝ, Michal ŠMÍDA, Šárka POSPÍŠILOVÁ and Michael DOUBEK. A novel thrombocytopenia-4-causing CYCS gene variant decreases caspase activity: Three-generation study. British journal of haematology. Hoboken: Wiley-Blackwell, 2024, 9 pp. ISSN 0007-1048. Available from: https://dx.doi.org/10.1111/bjh.19694.

METTE-TRIIN, Purde, Jovana CUPOVIC, Yannick A PALMOWSKI, Ahmad MAKKY, Sarah SCHMIDT, Alexander ROCHWARGER, Fabienne HARTMANN, Felix STEMESEDER, Alexander LERCHER, Abdou MARIE-THERESE, David BOMZE, Lenka BEŠŠE, Fiamma BERNER, Thomas TÜTING, Michael HÖLZEL, Andreas BERGTHALER, Stefan KOCHANEK, Burkhard LUDEWIG, Henning LAUTERBACH, Klaus K ORLINGER, Tobias BALD, Andrea SCHIETINGER, Christian SCHÜRCH, Sandra S RING and Lukas FLATZ. A replicating LCMV-based vaccine for the treatment of solid tumors. Molecular Therapy. CAMBRIDGE: CELL PRESS, 2024, vol. 32, No 2, p. 426-439. ISSN 1525-0016. Available from: https://dx.doi.org/10.1016/j.ymthe.2023.11.026.

JABANDŽIEV, Petr, Jaroslav Alois HUBACEK, Michalek JAROSLAV, Martin JOUZA, Jan PAPEŽ, Jakub PECL, Kateřina SLABÁ, Ondřej SLABÝ, Milan URÍK, Štefánia AULICKÁ, Lumír KUNOVSKÝ, Michalek JAROSLAV, Petr DOMINIK, Milan KRATOCHVÍL, Jozef KLUČKA and Petr ŠTOURAČ. A Tagging Polymorphism in Fat Mass and Obesity-Associated (FTO) Gene Is Associated with Sepsis Status in Children. ROMANIAN JOURNAL OF INTERNAL MEDICINE. WARSAW: SCIENDO, 2024, vol. 62, No 3, p. 279-285, 18 pp. ISSN 1582-3296. Available from: https://dx.doi.org/10.2478/rjim-2024-0008.

FADRUS, Pavel, Václav VYBÍHAL, Ivana ROŠKOVÁ, Iveta SELINGEROVÁ, Martin SMRČKA, Radim JANČÁLEK, Jiří ŠÁNA, Ondřej SLABÝ, Petr POSPÍŠIL, Ludmila HYNKOVÁ, Jan GARCIC, Renata BELANOVÁ, Jan KRISTEK, Andrea ŠPRLÁKOVÁ-PUKOVÁ, Zdeněk MACKERLE, Vilém JURÁŇ, Marek SOVA, Eduard NEUMAN, Hana VALEKOVÁ, Radek LAKOMÝ, Miloš HOLÁNEK, Roman HRSTKA, Michaela ŠVAJDOVÁ, Kateřina POLÁCHOVÁ, Ivana KOLOUŠKOVÁ, Pavel ŠLAMPA and Tomáš KAZDA. Adjuvant radiotherapy after brain metastasectomy: analysis of consecutive cohort of 118 patients from real world practice. Reports of Practical Oncology and Radiotherapy. GDANSK: VIA MEDICA, 2024, vol. 29, No 1, p. 30-41. ISSN 1507-1367. Available from: https://dx.doi.org/10.5603/rpor.99362.

BUDINSKÁ, Eva, Martina ČARNOGURSKÁ, Tina CATELA IVKOVIĆ, Táňa MACHÁČKOVÁ, Marie BOUDNÁ, Lucie PIFKOVÁ, Ondřej SLABÝ, Beatrix BENCSIKOVA and Vlad POPOVICI. An invasion front gene expression signature for higher-risk patient selection in stage IIA MSS colon cancer. Frontiers in Oncology. LAUSANNE: FRONTIERS MEDIA SA, 2024, vol. 14, April 2024, p. 1-8. ISSN 2234-943X. Available from: https://dx.doi.org/10.3389/fonc.2024.1367231.

BOBROWICZ, Malgorzata, Aleksandra KUSOWSKA, Marta KRAWCZYK, Andriy ZHYLKO, Christopher FORCADOS, Aleksander SLUSARCZYK, Joanna BARANKIEWICZ, Joanna DOMAGALA, Matylda KUBACZ, Michal ŠMÍDA, Lenka DOSTALOVÁ KOPEČNÁ, Katsiaryna MARHELAVA, Klaudyna FIDYT, Monika PEPEK, Iwona BARANOWSKA, Anna SZUMERA-CIECKIEWICZ, Else Marit INDERBERG, Sebastien WALCHLI, Monika GRANICA, Agnieszka GRACZYK-JARZYNKA, Martyna MAJCHRZAK, Marcin POREBA, Carina Lynn GEHLERT, Matthias PEIPP, Malgorzata FIRCZUK, Monika PROCHOREC-SOBIESZEK and Magdalena WINIARSKA. CD20 expression regulates CD37 levels in B-cell lymphoma - implications for immunotherapies. Oncoimmunology. Philadelphia: Taylor & Francis, 2024, vol. 13, No 1, p. 1-12. ISSN 2162-402X. Available from: https://dx.doi.org/10.1080/2162402X.2024.2362454.

SEÑA, Arlene C, Mitch M MATOGA, Ligang YANG, Eduardo LOPEZ-MEDINA, Farhang AGHAKHANIAN, Jane S CHEN, Everton B BETTIN, Melissa J CAIMANO, Wentao CHEN, Jonny A GARCIA-LUNA, Christopher M HENNELLY, Edward JERE, Yinbo JIANG, Jonathan J JULIANO, Petra POSPÍŠILOVÁ, Lady RAMIREZ, David ŠMAJS, Joseph D TUCKER, Fabio Vargas CELY, Heping ZHENG, Irving F HOFFMAN, Bin YANG, M Anthony MOODY, Kelly L HAWLEY, Juan C SALAZAR, Justin D RADOLF and Jonathan B PARR. Clinical and genomic diversity of Treponema pallidum subspecies pallidum to inform vaccine research: an international, molecular epidemiology study. The Lancet Microbe. AMSTERDAM: ELSEVIER, 2024, vol. 5, No 9, p. 1-13. ISSN 2666-5247. Available from: https://dx.doi.org/10.1016/S2666-5247(24)00087-9.

MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Lucy N JOHN, Camila GONZÁLEZ-BEIRAS, Oriol MITJÀ and David ŠMAJS. Coinfection of a yaws patient with two closely related Treponema pallidum subsp. pertenue strains: A rare event with potential evolutionary implications. Acta Tropica. AMSTERDAM: ELSEVIER, 2024, vol. 256, August 2024, p. 1-6. ISSN 0001-706X. Available from: https://dx.doi.org/10.1016/j.actatropica.2024.107254.

DE LA BOURDONNAYE, Gabin, Tereza GHAZALOVÁ, Petr FOJTÍK, Katerina KUTALKOVA, David BEDNÁŘ, Jiří DAMBORSKÝ, Vladimír ROTREKL, Veronika STEPANKOVA and Radka CHALOUPKOVÁ. Computer-aided engineering of stabilized fibroblast growth factor 21. Computational and Structural Biotechnology Journal. Elsevier, 2024, vol. 23, December 2024, p. 942-951. ISSN 2001-0370. Available from: https://dx.doi.org/10.1016/j.csbj.2024.02.001.

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ and Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae453.

GARCIA-BORJA, Elena, František SIEGL, Rosana MATEU, Ondřej SLABÝ, Aleksi SEDO, Petr BUSEK and Jiří ŠÁNA. Critical appraisal of the piRNA-PIWI axis in cancer and cancer stem cells. BIOMARKER RESEARCH. LONDON: BMC, 2024, vol. 12, No 1, p. 1-24. ISSN 2050-7771. Available from: https://dx.doi.org/10.1186/s40364-024-00563-3.

NAVRÁTILOVÁ, Polina, Markéta VEJVODOVÁ, Tomáš VACULOVIČ, Iva SLANINOVÁ, Jan EMMER, Tomáš TOMÁŠ, Luděk RYBA, Jan BURDA and Monika PÁVKOVÁ GOLDBERGOVÁ. Cytotoxic effects and comparative analysis of Ni ion uptake by osteoarthritic and physiological osteoblasts. Scientific Reports. BERLIN: NATURE PORTFOLIO, 2024, vol. 14, No 1, p. 1-15. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-024-67157-9.

JUGAS, Robin, Petra POKORNÁ, Soňa ADAMCOVÁ, Kateřina KOŽELKOVÁ, Dana KNOFLÍČKOVÁ, Hana PÁLOVÁ, Jaroslav ŠTĚRBA and Ondřej SLABÝ. Dataset of DNA methylation profiles of 189 pediatric central nervous system, soft tissue, and bone tumors. Data in Brief. Amsterdam: Elsevier, 2024, vol. 55, August 2024, p. 1-8. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2024.110590.

JUŘÍKOVÁ, Lenka, Lucia MASÁROVÁ, Roman PANOVSKÝ, Martin PEŠL, Kamila ŽONDRA REVENDOVÁ, Ondřej VOLNÝ, Věra FEITOVÁ, Tomáš HOLEČEK, Vladimír KINCL, Pavlína DANHOFER, Stanislav VOHÁŇKA, Jana HABERLOVÁ and Podolská KAROLÍNA. Decreased quality of life in Duchenne muscular disease patients related to functional neurological and cardiac impairment. Frontiers in Neurology. LAUSANNE: FRONTIERS MEDIA SA, 2024, vol. 15, February 2024, p. 1-11. ISSN 1664-2295. Available from: https://dx.doi.org/10.3389/fneur.2024.1360385.

NĚMEC, Václav, Marek REMEŠ, Petr BEŇOVSKÝ, Michael Christopher BÖCK, Eliška ŠRANKOVÁ, Jong Fu WONG, Cros JULIEN, Eleanor WILLIAMS, Lap Hang TSE, David SMIL, Deeba ENSAN, Methvin B ISAAC, Rima AL-AWAR, Regína GOMOLKOVÁ, Vlad-Constantin URSACHI, Bohumil FAFÍLEK, Zuzana KAHOUNOVA, Rachel VICHOVA, Ondrej VACEK, Benedict-Tilman BERGER, Carrow I WELLS, Cesear R CORONA, James D VASTA, Matthew B ROBERS, Pavel KREJČÍ, Karel SOUČEK, Alex N BULLOCK, Stefan KNAPP and Kamil PARUCH. Discovery of Two Highly Selective Structurally Orthogonal Chemical Probes for Activin Receptor-like Kinases 1 and 2. Journal of Medicinal Chemistry. Washington: American Chemical Society, 2024, vol. 67, No 15, p. 12632-12659. ISSN 0022-2623. Available from: https://dx.doi.org/10.1021/acs.jmedchem.4c00629.

NIRO, Francesco, Soraia FERNANDES, Marco CASSANI, Monica APOSTOLICO, Jorge Oliver-De La CRUZ, Daniel PEREIRA DE SOUSA, Stefania PAGLIARI, Vladimir VINARSKY, Zbyněk ZDRÁHAL, David POTĚŠIL, Václav PUSTKA, Giulio POMPILIO, Elena SOMMARIVA, Davide ROVINA, Angela Serena MAIONE, Luca BERSANINI, Malin BECKER, Marco RASPONI and Giancarlo FORTE. Fibrotic extracellular matrix impacts cardiomyocyte phenotype and function in an iPSC-derived isogenic model of cardiac fibrosis. Translational Research. NEW YORK: ELSEVIER SCIENCE INC, 2024, vol. 273, November 2024, p. 58-77. ISSN 1931-5244. Available from: https://dx.doi.org/10.1016/j.trsl.2024.07.003.

KOSEČKOVÁ MICENKOVÁ, Lenka, Kristýna BRODÍKOVÁ, Soňa SMETANOVÁ, Juraj BOSÁK, David ŠMAJS, Petr ANDRLA and Eva BUDINSKÁ. High colonisation by probiotic Escherichia coli A0 34/86 strain is associated with a less diverse microbiome related to children’s age. Beneficial Microbes. Wageningen Academic, 2024, vol. 15, No 1, p. 5-17. ISSN 1876-2883. Available from: https://dx.doi.org/10.1163/18762891-20220049.

KNAUF, Sascha, Linda HISGEN, Erik O. ÅGREN, Alexander M BARLOW, Marcus FAEHNDRICH, Ulrich VOIGT, Luisa FISCHER, Linda GRILLOVÁ, Luisa K HALLMAIER-WACKER, Marja J L KIK, Jana C KLINK, Jitka KŘENOVÁ, Antonio LAVAZZA, Simone LÜERT, Markéta NOVÁKOVÁ, Darina ČEJKOVÁ, Carlo PACIONI, Tiziana TROGU, David ŠMAJS and Christian ROOS. High prevalence and genetic diversity of Treponema paraluisleporidarum isolates in European lagomorphs. Microbiology spectrum. WASHINGTON: AMER SOC MICROBIOLOGY, 2024, vol. 12, No 1, p. 1-15. ISSN 2165-0497. Available from: https://dx.doi.org/10.1128/spectrum.01774-23.

BEŠŠE, Andrej, Lenka SEDLAŘÍKOVÁ, Lorina BUECHLER, Marianne KRAUS, Chieh-Hsiang YANG, Nicol STRAKOVA, Karel SOUCEK, Jiří NAVRÁTIL, Marek SVOBODA, Alana L WELM, Markus JOERGER, Christoph DRIESSEN and Lenka BEŠŠE. HIV-protease inhibitors potentiate the activity of carfilzomib in triple-negative breast cancer. British journal of cancer. LONDON: NATURE PUBLISHING GROUP, 2024, 13 pp. ISSN 0007-0920. Available from: https://dx.doi.org/10.1038/s41416-024-02774-9.

KLIMOVIČ, Šimon, Deborah BECKEROVÁ, Jakub VĚŽNÍK, Daniil KABANOV, Karel LACINA, Šárka JELÍNKOVÁ, Jaromír GUMULEC, Vladimír ROTREKL and Jan PŘIBYL. Hyaluronic acid-based hydrogels with tunable mechanics improved structural and contractile properties of cells. Biomaterials Advances. Elsevier B.V., 2024, vol. 159, May 2024, p. 1-12. ISSN 2772-9508. Available from: https://dx.doi.org/10.1016/j.bioadv.2024.213819.

TAMIZHSELVAN, Prashanth, Sharmila MADHAVAN, Christian CONSTAN-AGUILAR, Eman ELREFAAY, Jie LIU, Ales PENCIK, Ondrej NOVAK, Albert CAIRO, Monika HRTYAN, Markus GEISLER and Vanesa Beatriz TOGNETTI. Chloroplast Auxin Efflux Mediated by ABCB28 and ABCB29 Fine-Tunes Salt and Drought Stress Responses in Arabidopsis. PLANTS-BASEL. BASEL: MDPI, 2024, vol. 13, No 1, p. 1-26. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants13010007.

ŠUSTR, Filip, Táňa MACHÁČKOVÁ, Martin PEŠL, Jana SVAČINOVÁ, Karolína TRACHTOVÁ, Zdeněk STÁREK, Bohuslav KIANIČKA, Ondřej SLABÝ and Jan NOVÁK. Identification of Plasmatic microRNA-206 as New Predictor of Early Recurrence of Atrial Fibrillation after Catheter Ablation Using Next-generation Sequencing. MOLECULAR DIAGNOSIS & THERAPY. AUCKLAND: ADIS INT LTD, 2024, vol. 28, No 3, p. 1-10. ISSN 1177-1062. Available from: https://dx.doi.org/10.1007/s40291-024-00698-x.

EID, Michal, Jakub TRIZULJAK, Renata TASLEROVÁ, Martin GRYC, Jakub VLAŽNÝ, Sára VILMANOVÁ, Martina JELÍNKOVÁ, Alena HOMOLOVÁ, Štěpán TUČEK, Jan HLAVSA, Tomáš GROLICH, Zdeněk KALA, Zdeněk KRÁL and Ondřej SLABÝ. Incidental Germline Findings During Comprehensive Genomic Profiling of Pancreatic and Colorectal Cancer: Single-center, Molecular Tumor Board Experience. Mutagenesis. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0267-8357. Available from: https://dx.doi.org/10.1093/mutage/geae014.

KE, Bo-Jun, Saeed ABDURAHIMAN, Francesca BISCU, Gaia ZANELLA, Gabriele DRAGONI, Sneha SANTHOSH, De Simone VERONICA, Anissa ZOUZAF, van Baarle LIES, Michelle STAKENBORG, Veronika BOSÁKOVÁ, Van Rymenant YENTL, Emile VERHULST, Sare VERSTOCKT, Elliott KLEIN, Gabriele BISLENGHI, Albert WOLTHUIS, Jan FRIČ, Christine BREYNAERT, Andre D'HOORE, van der Veken PIETER, De Meester INGRID, Sara LOVISA, Lukas J A C HAWINKELS, Bram VERSTOCKT, De Hertogh GERT, Severine VERMEIRE and Gianluca MATTEOLI. Intercellular interaction between FAP+ fibroblasts and CD150+inflammatory monocytes mediates fibrostenosis in Crohn's disease. Journal of Clinical Investigation. Ann Arbor: AMER SOC CLINICAL INVESTIGATION INC, 2024, vol. 134, No 16, p. 1-19. ISSN 0021-9738. Available from: https://dx.doi.org/10.1172/JCI173835.

BOUDNÁ, Marie, Táňa MACHÁČKOVÁ, Petra VYCHYTILOVÁ, Karolína TRACHTOVÁ, Renata BARTOŠOVÁ, Tina CATELA IVKOVIĆ, Dagmar AL TUKMACHI, Robin JUGAS, Lucie PIFKOVÁ, Jana ORLÍČKOVÁ, Jan KOTOUČEK, Marketa PAVLIKOVA, Milana ŠACHLOVÁ, Lucia BOHOVICOVÁ, Teodor STANĚK, Jana HALÁMKOVÁ, Igor KISS, Tomáš GROLICH, Martin SVOBODA, Zdeněk KALA, Kamila SOUČKOVÁ and Ondřej SLABÝ. Investigation of long non-coding RNAs in extracellular vesicles from low-volume blood serum specimens of colorectal cancer patients. CLINICAL AND EXPERIMENTAL MEDICINE. MILAN: SPRINGER-VERLAG ITALIA SRL, 2024, vol. 24, No 1, p. 1-14. ISSN 1591-8890. Available from: https://dx.doi.org/10.1007/s10238-024-01323-1.

KARL, Kelly, Del Piccolo NUALA, Taylor LIGHT, Tanaya ROY, Pooja DUDEJA, Vlad-Constantin URSACHI, Bohumil FAFÍLEK, Pavel KREJČÍ and Kalina HRISTOVA. Ligand bias underlies differential signaling of multiple FGFs via FGFR1. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2024, vol. 12, April 2024, p. 1-28. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.88144.

MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Maria Paula M MADRUGA, Lucy N JOHN, Camila G BEIRAS, Linda GRILLOVÁ, Jan OPPELT, Arka BANERJEE, Marti VALL-MAYANS, Oriol MITJA and David ŠMAJS. Low genetic diversity of Treponema pallidum ssp. pertenue (TPE) isolated from patients’ ulcers in Namatanai District of Papua New Guinea: Local human population is infected by three TPE genotypes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2024, vol. 18, No 1, p. 1-17. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0011831.

VRBOVÁ, Eliška, Petra POSPÍŠILOVÁ, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Filip ROB, Vladimír VAŠKŮ, Petra MOSIO, Radim STRNADEL, Olga FAUSTMANNOVA, Ivana KUKLOVA, Monika DVOŘÁKOVÁ HEROLDOVÁ, Hana ZAKOUCKA and David ŠMAJS. Majority of Treponema pallidum ssp. pallidum MLST allelic profiles in the Czech Republic (2004–2022) belong to two SS14-like clusters. Scientific Reports. BERLIN: NATURE RESEARCH, 2024, vol. 14, No 1, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-024-68656-5.

AKITA, Masaki, Paul GIRVAN, Mário ŠPÍREK, Jiří NOVÁČEK, David RUEDA, Zbyněk PROKOP and Lumír KREJČÍ. Mechanism of BCDX2-mediated RAD51 nucleation on short ssDNA stretches and fork DNA. Nucleic acids research. Oxford: Oxford University Press, 2024, 15 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae770.

JONAS, Katharina, Felix PRINZ, Manuela FERRACIN, Katarina KRAJINA, Alexander DEUTSCH, Tobias MADL, Beate RINNER, Ondřej SLABÝ, Christiane KLEC and Martin PICHLER. MiR-4646-5p Acts as a Tumor-Suppressive Factor in Triple Negative Breast Cancer and Targets the Cholesterol Transport Protein GRAMD1B. Non-coding RNA. Švýcarsko: MDPI, 2024, vol. 10, No 1, p. 1-24. ISSN 2311-553X. Available from: https://dx.doi.org/10.3390/ncrna10010002.

ISIK, Esin, Kaustubh SHUKLA, Michaela POSPÍŠILOVÁ, Christiane KÖNIG, Martin ANDRS, Satyajeet RAO, Vinicio ROSANO, Jana DOBROVOLNA, Lumír KREJČÍ and Pavel JANSCAK. MutSβ-MutLβ-FANCJ axis mediates the restart of DNA replication after fork stalling at cotranscriptional G4/R-loops. Science advances. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2024, vol. 10, No 6, p. 1-16. ISSN 2375-2548. Available from: https://dx.doi.org/10.1126/sciadv.adk2685.

BOHOŠOVÁ, Júlia, Nida Sarosh ASHRAF, Ondřej SLABÝ and George A CALIN. Non-Coding RNAs in Peritoneal Carcinomatosis: From Bench to Bedside. Cancers. BASEL: MDPI, 2024, vol. 16, No 17, p. 1-12. ISSN 2072-6694. Available from: https://dx.doi.org/10.3390/cancers16172961.

VYCHYTILOVÁ, Petra, Sára VILMANOVÁ, Lucie PIFKOVÁ, Tina CATELA IVKOVIĆ, Marie MĄDRZYK, Robin JUGAS, Táňa MACHÁČKOVÁ, Jan KOTOUČEK, Milana ŠACHLOVÁ, Lucia BOHOVICOVÁ, Teodor STANĚK, Jana HALÁMKOVÁ, Igor KISS and Ondřej SLABÝ. Optimized procedure for high-throughput transcriptome profiling of small extracellular vesicles isolated from low volume serum samples. Clinical Chemistry and Laboratory Medicine. Berlin: WALTER DE GRUYTER, 2024, vol. 62, No 1, p. 157-167. ISSN 1434-6621. Available from: https://dx.doi.org/10.1515/cclm-2023-0610.

SILVA, Elsa D, Daniel PEREIRA DE SOUSA, Francisco RIBEIRO-COSTA, Rui CERQUEIRA, Francisco J ENGUITA, Rita N GOMES, João DIAS-FERREIRA, Cassilda PEREIRA, Ana CASTANHEIRA, Perpétua PINTO-DO-Ó, Adelino F LEITE-MOREIRA and Diana S NASCIMENTO. Pericardial Fluid Accumulates microRNAs That Regulate Heart Fibrosis after Myocardial Infarction. International Journal of Molecular Sciences. Basel: MDPI, 2024, vol. 25, No 15, p. 1-18. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms25158329.

ANDREJČINOVÁ, Ivana, Gabriela BLAZKOVA, Ioanna PAPATHEODOROU, Kamila BENDÍČKOVÁ, Veronika BOSÁKOVÁ, Monika SKOTAKOVA, Roman PANOVSKÝ, Lukáš OPATŘIL, Ondřej VYMAZAL, Petra KOVAČOVICOVÁ, Vladimír ŠRÁMEK, Martin HELÁN, Marcela HORTOVÁ KOHOUTKOVÁ and Jan FRIČ. Persisting IL-18 levels after COVID-19 correlate with markers of cardiovascular inflammation reflecting potential risk of CVDs development. Heliyon. OXFORD: ELSEVIER SCI LTD, 2024, vol. 10, No 4, p. 1-13. ISSN 2405-8440. Available from: https://dx.doi.org/10.1016/j.heliyon.2024.e25938.

KÝR, Michal, Peter MÚDRY, Kristýna POLÁŠKOVÁ, Lenka ZDRAŽILOVÁ DUBSKÁ, Regina DEMLOVÁ, Jana KUBÁTOVÁ, Eva HLAVÁČKOVÁ, Kateřina ČERNÁ PILÁTOVÁ, Pavel MAZANEK, Klára VEJMĚLKOVÁ, Vítězslav DUŠEK, Pavel TINKA, Martin BALÁŽ, Tomáš MERTA, Zuzana KUTTNEROVÁ, Terézia TUREKOVÁ, Zdeněk PAVELKA, Petra POKORNÁ, Hana PÁLOVÁ, Marie MLNAŘÍKOVÁ, Marta JEŽOVÁ, Renata KELLNEROVÁ, Sarka KOZAKOVA, Ondřej SLABÝ, Dalibor VALÍK and Jaroslav ŠTĚRBA. Personalized dendritic cell vaccine in multimodal individualized combination therapy improves survival in high-risk pediatric cancer patients. International journal of cancer. HOBOKEN: WILEY, 2024, vol. 155, No 8, p. 1443-1454. ISSN 0020-7136. Available from: https://dx.doi.org/10.1002/ijc.35062.

SLANINA, Peter, Julie ŠTÍCHOVÁ, Veronika BOSÁKOVÁ, Iva STANICZKOVÁ ZAMBO, Marcela HORTOVÁ KOHOUTKOVÁ, Petra LÁZNIČKOVÁ, Zita CHOVANCOVÁ, Jiří LITZMAN, Terezie STEJSKALOVÁ, Jan FRIČ and Marcela VLKOVÁ. Phenotype and oxidative burst of low-density neutrophil subpopulations are altered in common variable immunodeficiency patients. CYTOMETRY PART B-CLINICAL CYTOMETRY. UNITED STATES: WILEY, 2024, vol. 106, No 2, p. 99-112. ISSN 1552-4949. Available from: https://dx.doi.org/10.1002/cyto.b.22150.

AITHAL, Rakesh, Kuldeep NANGALIA, Mário ŠPÍREK, Doris CHEN, Franz KLEIN and Lumír KREJČÍ. Physical interaction with Spo11 mediates the localisation of Mre11 to chromatin in meiosis and promotes its nuclease activity. Nucleic acids research. Oxford: Oxford University Press, 2024, vol. 52, No 8, p. 4328-4343. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae111.

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KRZYSCIK, Mateusz A, Kelly KARL, Pooja DUDEJA, Pavel KREJČÍ and Kalina HRISTOVA. Quantitative and qualitative differences in the activation of a fibroblast growth factor receptor by different FGF ligands. CYTOKINE & GROWTH FACTOR REVIEWS. London: ELSEVIER SCI LTD, 2024, vol. 78, August 2024, p. 77-84. ISSN 1359-6101. Available from: https://dx.doi.org/10.1016/j.cytogfr.2024.07.002.

MEDAPPA, Monica, Petra POSPÍŠILOVÁ, Lucy N JOHN, Camila GONZÁLEZ-BEIRAS, Marti VALL-MAYANS, Oriol MITJÀ and David ŠMAJS. Sequence typing of Haemophilus ducreyi isolated from patients in the Namatanai region of Papua New Guinea: Infections by Class I and Class II strain types differ in ulcer duration and resurgence of infection after azithromycin treatment. PLOS Neglected Tropical Diseases. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024, vol. 18, No 8, p. 1-16. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0012398.

BOUDNÁ, Marie, Andres DELGADO CAMPOS, Petra VYCHYTILOVÁ, Táňa MACHÁČKOVÁ, Ondřej SLABÝ and Kamila SOUČKOVÁ. Strategies for labelling of exogenous and endogenous extracellular vesicles and their application for in vitro and in vivo functional studies. Cell Communication and Signaling. LONDON: BMC, 2024, vol. 22, No 1, p. 1-15. ISSN 1478-811X. Available from: https://dx.doi.org/10.1186/s12964-024-01548-3.

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BOSÁK, Juraj, Lenka MIKALOVÁ, Matěj HRALA, Petra POSPÍŠILOVÁ, Martin FALDYNA and David ŠMAJS. Treponema pallidum subsp. pallidum strains DAL-1 and Philadelphia 1 differ in generation times in vitro as well as during experimental rabbit infection. Plos One. SAN FRANCISCO: PUBLIC LIBRARY SCIENCE, 2024, vol. 19, No 5, p. 1-12. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0304033.

SEREME, Youssouf, Sandra Madariaga ZARZA, Hacène MEDKOUR, Soraya MEZOUAR, Laia DOTRAS, Amanda BARCIELA, R Adriana HERNANDEZ-AGUILAR, Joana VITTE, David ŠMAJS, Meriem LOUNI, Baptiste MULOT, Antoine LECLERC, Guéry JEAN-PASCAL, Nicolas ORAIN, Georges DIATTA, Cheikh SOKHNA, Didier RAOULT, Bernard DAVOUST, Florence FENOLLAR and Oleg MEDIANNIKOV. Treponematosis in critically endangered Western chimpanzees (Pan troglodytes verus) in Senegal. One Health. AMSTERDAM: ELSEVIER, 2024, vol. 18, June 2024, p. 1-9. ISSN 2352-7714. Available from: https://dx.doi.org/10.1016/j.onehlt.2024.100694.

DAĎOVÁ, Petra, Antónia MIKULOVÁ, Radim JAROUŠEK, Michaela CHORVÁTOVÁ, Stjepan ULDRIJAN and Lukáš KUBALA. A forskolin-mediated increase in cAMP promotes T helper cell differentiation into the Th1 and Th2 subsets rather than into the Th17 subset. International Immunopharmacology. Elsevier, 2023, vol. 125, December, p. 1-15. ISSN 1567-5769. Available from: https://dx.doi.org/10.1016/j.intimp.2023.111166.

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KOHUTOVÁ, Aneta, Dita MÜNZOVÁ, Martin PEŠL and Vladimír ROTREKL. a(1)-Adrenoceptor agonist methoxamine inhibits base excision repair via inhibition of apurinic/apyrimidinic endonuclease 1 (APE1). Acta Pharmaceutica. WARSAW: SCIENDO, 2023, vol. 73, No 2, p. 281-291. ISSN 1330-0075. Available from: https://dx.doi.org/10.2478/acph-2023-0012.

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BRATOVÁ, Monika, Kristián BRAT, Zdeněk PAVLOVSKÝ, Jiří ŠÁNA and Ondřej SLABÝ. Driver and actionable mutations in younger patients with lung cancer-are we searching properly? Biomedical Papers, Olomouc: Palacky University. Olomouc: Palacky University, 2023, vol. 167, No 2, p. 152-156. ISSN 1213-8118. Available from: https://dx.doi.org/10.5507/bp.2023.012.

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JONAS, Katharina, Felix PRINZ, Manuela FERRACIN, Katarina KRAJINA, Barbara PASCULLI, Alexander DEUTSCH, Tobias MADL, Beate RINNER, Ondřej SLABÝ, Christiane KLEC and Martin PICHLER. MiR-4649-5p acts as a tumor-suppressive microRNA in triple negative breast cancer by direct interaction with PIP5K1C, thereby potentiating growth-inhibitory effects of the AKT inhibitor capivasertib. Breast Cancer Research. London, Great Britain: BIOMED CENTRAL LTD, 2023, vol. 25, No 1, p. 1-17. ISSN 1465-5411. Available from: https://dx.doi.org/10.1186/s13058-023-01716-2.

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MARINI PALOMEQUE, María Victoria, Fedor NIKULENKOV, Pounami SAMADDER, Sissel JUUL, Birgitta R. KNUDSEN and Lumír KREJČÍ. MUS81 cleaves TOP1‑derived lesions and other DNA-protein cross‑links. BMC Biology. London: BMC, 2023, vol. 21, No 1, p. 1-16. ISSN 1741-7007. Available from: https://dx.doi.org/10.1186/s12915-023-01614-1.

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KULÍŠKOVÁ, Petra, Lucie VAŠÁTKOVÁ and Iva SLANINOVÁ. Quaternary Benzophenanthridine Alkaloids Act as Smac Mimetics and Overcome Resistance to Apoptosis. International Journal of Molecular Sciences. BASEL: MDPI, 2023, vol. 24, No 20, p. 1-16. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms242015405.

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STANÍKOVÁ, Andrea, Martin JOUZA, Júlia BOHOŠOVÁ, Ondřej SLABÝ and Petr JABANDŽIEV. Role of the microbiome in pathophysiology of necrotising enterocolitis in preterm neonates. BMJ Paediatrics Open. LONDON: BMJ PUBLISHING GROUP, 2023, vol. 7, No 1, p. 1-8. ISSN 2399-9772. Available from: https://dx.doi.org/10.1136/bmjpo-2023-002172.

LÁTROVÁ, Klara, Tereza DOLEJŠOVÁ, Lucia MOTLOVÁ, Gabriela MIKUŠOVÁ, Juraj BOSÁK, Kateřina SNOPKOVÁ, David ŠMAJS, Ivo KONOPÁSEK and Radovan FIŠER. R-Type Fonticins Produced by Pragia fontium Form Large Pores with High Conductance. JOURNAL OF BACTERIOLOGY. WASHINGTON: AMER SOC MICROBIOLOGY, 2023, vol. 205, No 1, p. 1-15. ISSN 0021-9193. Available from: https://dx.doi.org/10.1128/jb.00315-22.

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MRKVOVÁ, Zuzana, Michaela PORTEŠOVÁ and Iva SLANINOVÁ. Loss of FADD and Caspases Affects the Response of T-Cell Leukemia Jurkat Cells to Anti-Cancer Drugs. International Journal of Molecular Sciences. Basel: MDPI, 2021, vol. 22, No 5, p. 1-16. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms22052702.

HRUBÁ, Eva, Michaela KAVKOVÁ, Linda DALECKÁ, Miloš MACHOLÁN, Tomáš ZIKMUND, Miroslav VAŘECHA, Michaela BOSÁKOVÁ, Jozef KAISER, Pavel KREJČÍ, Mária HOVOŘÁKOVÁ and Marcela BUCHTOVÁ. Loss of Sprouty Produces a Ciliopathic Skeletal Phenotype in Mice Through Upregulation of Hedgehog Signaling. Journal of Bone and Mineral Research. American Society for Bone and Mineral Research, 2021, vol. 36, No 11, p. 2258-2274. ISSN 0884-0431. Available from: https://dx.doi.org/10.1002/jbmr.4427.

NOVÁK, Jan, Táňa MACHÁČKOVÁ, Jan KREJČÍ, Julie DOBROVOLNÁ and Ondřej SLABÝ. MicroRNAs as theranostic markers in cardiac allograft transplantation: from murine models to clinical practice. Theranostics. Lake Haven: Ivyspring International Publisher, 2021, vol. 11, No 12, p. 6058-6073. ISSN 1838-7640. Available from: https://dx.doi.org/10.7150/thno.56327.

JABANDŽIEV, Petr, Tatsuhiko KAKISAKA, Júlia BOHOŠOVÁ, Tereza PINKASOVÁ, Lumír KUNOVSKÝ, Ondřej SLABÝ and Ajay GOEL. MicroRNAs in Colon Tissue of Pediatric Ulcerative Pancolitis Patients Allow Detection and Prognostic Stratification. Journal of Clinical Medicine. Basel: MDPI, 2021, vol. 10, No 6, p. 1-11. ISSN 2077-0383. Available from: https://dx.doi.org/10.3390/jcm10061325.

BOHOŠOVÁ, Júlia, Jiří VAJČNER, Petr JABANDŽIEV, Hana OŠLEJŠKOVÁ, Ondřej SLABÝ and Štefánia AULICKÁ. MicroRNAs in the development of resistance to antiseizure drugs and their potential as biomarkers in pharmacoresistant epilepsy. Epilepsia. Hoboken: Wiley-Blackwell, 2021, vol. 62, No 11, p. 2573-2588. ISSN 0013-9580. Available from: https://dx.doi.org/10.1111/epi.17063.

RAFFAELE, Marco, Kristína KOVAČOVICOVÁ, Jan FROHLICH, Oriana LO RE, Sebastiano GIALLONGO, J. A. OBEN, Martin FALDYNA, Lenka LEVA, Antonino Giulio GIANNONE, Daniela CABIBI and Manlio VINCIGUERRA. Mild exacerbation of obesity- and age-dependent liver disease progression by senolytic cocktail dasatinib plus quercetin. Cell Communication and Signaling. LONDON: BMC, 2021, vol. 19, No 1, p. 1-9. ISSN 1478-811X. Available from: https://dx.doi.org/10.1186/s12964-021-00731-0.

PERESTRELO, A. R., A. C. SILVA, J. OLIVER-DE LA CRUZ, Fabiana MARTINO, Vladimir HORVATH, Guido CALUORI, Ondrej POLANSKY, Vladimir VINARSKY, G. AZZATO, G. DE MARCO, Víta ŽAMPACHOVÁ, Petr SKLÁDAL, S. PAGLIARI, A. RAINER, P. PINTO-DO-O, A. CARAVELLA, Kamila KOCI, D. S. NASCIMENTO and Giancarlo FORTE. Multiscale Analysis of Extracellular Matrix Remodeling in the Failing Heart. Circulation research. Dallas: American Heart Association, 2021, vol. 128, No 1, p. 24-38. ISSN 0009-7330. Available from: https://dx.doi.org/10.1161/CIRCRESAHA.120.317685.

SLABÁ, Kateřina, Hana PÁLOVÁ, Petra VESELÁ, Štefánia AULICKÁ, Petra KONEČNÁ, Martin ŠTĚRBA, Petr JABANDŽIEV, Ondřej SLABÝ and Dagmar PROCHÁZKOVÁ. Neurovývojová porucha s mentální retardací spojená s genem PPP2R5D - první případ v České republice (PPP2R5D-related intellectual disability and neurodevelopmental delay - the first case in the Czech Republic). Československá neurologie a neurochirurgie. Prague: CZECH MEDICAL SOC, 2021, vol. 84, No 2, p. 205-207. ISSN 1210-7859. Available from: https://dx.doi.org/10.48095/cccsnn2021205.

TIDU, Federico, Marco DE ZUANI, Shyam Sushama JOSE, Kamila BENDICKOVA, Lukáš KUBALA, Frank CARUSO, Francesca CAVALIERI, Giancarlo FORTE and Jan FRIČ. NFAT signaling in human mesenchymal stromal cells affects extracellular matrix remodeling and antifungal immune responses. iSCIENCE. CAMBRIDGE: CELL PRESS, 2021, vol. 24, No 6, p. 1-24. ISSN 2589-0042. Available from: https://dx.doi.org/10.1016/j.isci.2021.102683.

BOSÁK, Juraj, Matěj HRALA, Lenka MICENKOVÁ and David ŠMAJS. Non-antibiotic antibacterial peptides and proteins ofEscherichia coli: efficacy and potency of bacteriocins. EXPERT REVIEW OF ANTI-INFECTIVE THERAPY. ABINGDON: TAYLOR & FRANCIS LTD, 2021, vol. 19, No 3, p. 309-322. ISSN 1478-7210. Available from: https://dx.doi.org/10.1080/14787210.2020.1816824.

PAPEŽ, Jan, Jiří ŠTARHA, Kateřina SLABÁ, Jaroslav A. HUBACEK, Jakub PECL, Štefánia AULICKÁ, Milan URÍK, Serdar CEYLANER, Petra POKORNÁ, Ondřej SLABÝ and Petr JABANDŽIEV. Novel mutations in TRPM6 gene associated with primary hypomagnesemia with secondary hypocalcemia. Case report. Biomedical Papers, Olomouc: Palacky University. Olomouc: Palacky University, 2021, vol. 165, No 4, p. 454-457. ISSN 1213-8118. Available from: https://dx.doi.org/10.5507/bp.2021.027.

ŠPÍREK, Mário, M. R. G. TAYLOR, Ondrej BELÁŇ, S. J. BOULTON and Lumír KREJČÍ. Nucleotide proofreading functions by nematode RAD51 paralogs facilitate optimal RAD51 filament function. Nature Communications. London: Nature Publishing Group, 2021, vol. 12, No 1, p. 1-12. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-021-25830-x.

KANDIMALLA, R., W. WANG, F. YU, N. X. ZHOU, F. GAO, M. SPILLMAN, Lucie MOUKOVÁ, Ondřej SLABÝ, B. SALHIA, S. T. ZHOU, X. WANG and A. GOEL. OCaMIR-A Noninvasive, Diagnostic Signature for Early-Stage Ovarian Cancer: A Multi-cohort Retrospective and Prospective Study. Clinical cancer research. Philadelphia: AMER ASSOC CANCER RESEARCH, 2021, vol. 27, No 15, p. 4277-4286. ISSN 1078-0432. Available from: https://dx.doi.org/10.1158/1078-0432.CCR-21-0267.

NITA, Alexandru, Sara POOVAKULATHU ABRAHAM, Pavel KREJČÍ and Michaela BOSÁKOVÁ. Oncogenic FGFR Fusions Produce Centrosome and Cilia Defects by Ectopic Signaling. Cells. Basel: MDPI, 2021, vol. 10, No 6, p. 1-25. ISSN 2073-4409. Available from: https://dx.doi.org/10.3390/cells10061445.

SOUIDI, M., Y. SLEIMAN, Ivana AĆIMOVIĆ, Jan PŘIBYL, A. CHARRABI, V. BAECKER, V. SCHEUERMANN, Martin PEŠL, Šárka JELÍNKOVÁ, Petr SKLÁDAL, Petr DVOŘÁK, A. LACAMPAGNE, Vladimír ROTREKL and A. C. MELI. Oxygen Is an Ambivalent Factor for the Differentiation of Human Pluripotent Stem Cells in Cardiac 2D Monolayer and 3D Cardiac Spheroids. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2021, vol. 22, No 2, p. 1-19. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms22020662.

BOSÁK, Juraj, Matej LEXA, Kristýna FIEDOROVÁ, Darshak Chandulal GADARA, Lenka MICENKOVÁ, Zdeněk SPÁČIL, Jiří LITZMAN, Tomáš FREIBERGER and David ŠMAJS. Patients With Common Variable Immunodeficiency (CVID) Show Higher Gut Bacterial Diversity and Levels of Low-Abundance Genes Than the Healthy Housemates. Frontiers in Immunology. LAUSANNE: FRONTIERS MEDIA SA, 2021, vol. 12, May 2021, p. 1-13. ISSN 1664-3224. Available from: https://dx.doi.org/10.3389/fimmu.2021.671239.

JEKL, Vladimír, Markéta NOVÁKOVÁ, Edita JEKLOVÁ, Petra POSPÍŠILOVÁ, Jitka KŘENOVÁ, Martin FALDYNA, Miša ŠKORIČ and David ŠMAJS. Penicillin Treatment Failure in Rabbit Syphilis Due to the Persistence of Treponemes (Treponema paraluisleporidarum Ecovar Cuniculus) in the Focus of Infection. Frontiers in Veterinary Science. Lausanne: Frontiers Media SA, 2021, vol. 8, June, p. "675631", 8 pp. ISSN 2297-1769. Available from: https://dx.doi.org/10.3389/fvets.2021.675631.

GIALLONGO, Sebastiano, Oriana LO RE, Gabriela LOCHMANOVÁ, Luca PARCA, Francesco PETRIZZELLI, Zbyněk ZDRÁHAL, Tommaso MAZZA and Vinciguerra MANLIO. Phosphorylation within Intrinsic Disordered Region Discriminates Histone Variant macroH2A1 Splicing Isoforms-macroH2A1.1 and macroH2A1.2. Biology. Basel: MDPI, 2021, vol. 10, No 7, p. 1-13. ISSN 2079-7737. Available from: https://dx.doi.org/10.3390/biology10070659.

HORTOVÁ KOHOUTKOVÁ, Marcela, Marco ZUANI DE, Petra LÁZNIČKOVÁ, Kamila BENDICKOVA, Ondřej MRKVA, Ivana ANDREJČINOVÁ, Alexandra MÝTNIKOVÁ, Ondrej POLANSKY, Kamila KOCI, Veronika TOMÁŠKOVÁ, Vladimír ŠRÁMEK, Martin HELÁN and Jan FRIČ. Polymorphonuclear Cells Show Features of Dysfunctional Activation During Fatal Sepsis. Frontiers in Immunology. LAUSANNE: FRONTIERS MEDIA SA, 2021, vol. 12, December 2021, p. 1-12. ISSN 1664-3224. Available from: https://dx.doi.org/10.3389/fimmu.2021.741484.

CAPOOR, M. N., Anna KONIECZNA, A. MCDOWELL, Filip RŮŽIČKA, Martin SMRČKA, Radim JANČÁLEK, Karel MÁCA, Michael LUJC, Fatima AHMED, C. BIRKENMAIER, S. DUDLI and Ondřej SLABÝ. Pro-Inflammatory and Neurotrophic Factor Responses of Cells Derived from Degenerative Human Intervertebral Discs to the Opportunistic Pathogen Cutibacterium acnes. International Journal of Molecular Sciences. Basel: MDPI, 2021, vol. 22, No 5, p. 1-16. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms22052347.

PANOVSKÝ, Roman, Martin PEŠL, Jan MÁCHAL, Tomáš HOLEČEK, Věra FEITOVÁ, Lenka JUŘÍKOVÁ, Lucia MASÁROVÁ, Eva PEŠLOVÁ, Lukáš OPATŘIL, Mary Luz MOJICA-PISCIOTTI and Vladimír KINCL. Quantitative assessment of left ventricular longitudinal function and myocardial deformation in Duchenne muscular dystrophy patients. Orphanet Journal of Rare Diseases. London: BMC, 2021, vol. 16, No 1, p. 1-9. ISSN 1750-1172. Available from: https://dx.doi.org/10.1186/s13023-021-01704-9.

ROMANO, Roberta, Matteo CALCAGNILE, Azzurra MARGIOTTA, Lorenzo FRANCI, Mario CHIARIELLO, Pietro ALIFANO and Cecilia BUCCI. RAB7A Regulates Vimentin Phosphorylation through AKT and PAK. Cancers. Basel: MDPI, 2021, vol. 13, No 9, p. 1-22. ISSN 2072-6694. Available from: https://dx.doi.org/10.3390/cancers13092220.

GIALLONGO, Sebastiano, Daniela ŘEHÁKOVÁ, Marco RAFFAELE, Oriana LO RE, Irena KOUTNÁ and Manlio VINCIGUERRA. Redox and Epigenetics in Human Pluripotent Stem Cells Differentiation. ANTIOXIDANTS & REDOX SIGNALING. NEW ROCHELLE: MARY ANN LIEBERT, INC, 2021, vol. 34, No 4, p. 335-349. ISSN 1523-0864. Available from: https://dx.doi.org/10.1089/ars.2019.7983.

CERMAK, Vladimir, Aneta SKARKOVA, Ladislav MERTA, Veronika KOLOMAZNIKOVA, Veronika PALUŠOVÁ, Stjepan ULDRIJAN, Daniel ROSEL and Jan BRABEK. RNA-seq Characterization of Melanoma Phenotype Switch in 3D Collagen after p38 MAPK Inhibitor Treatment. Biomolecules. BASEL: MDPI, 2021, vol. 11, No 3, p. 1-13. ISSN 2218-273X. Available from: https://dx.doi.org/10.3390/biom11030449.

MARGIOTTA, Azzurra. Role of SNAREs in Neurodegenerative Diseases. Cells. Basel: MDPI, 2021, vol. 10, No 5, p. 1-15. ISSN 2073-4409. Available from: https://dx.doi.org/10.3390/cells10050991.

MARQUES, Sérgio Manuel, Lucie ŠUPOLÍKOVÁ, Lenka MOLČANOVÁ, Karel ŠMEJKAL, David BEDNÁŘ and Iva SLANINOVÁ. Screening of Natural Compounds as P-Glycoprotein Inhibitors against Multidrug Resistance. BIOMEDICINES. BASEL: MDPI, 2021, vol. 9, No 4, p. 1-22. ISSN 2227-9059. Available from: https://dx.doi.org/10.3390/biomedicines9040357.

XUE, C. Y., Lucia MOLNÁROVÁ, J. B. STEINFELD, W. X. ZHAO, C. J. MA, Mário ŠPÍREK, K. KANIECKI, Y. KWON, Ondrej BELAN, Kateřina KREJČÍ, S. J. BOULTON, P. SUNG, E. C. GREENE and Lumír KREJČÍ. Single-molecule visualization of human RECQ5 interactions with single-stranded DNA recombination intermediates. Nucleic acids research. Oxford: Oxford University Press, 2021, vol. 49, No 1, p. 285-305. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkaa1184.

BARTOS, M., František SIEGL, Alena KOPKOVÁ, Lenka RADOVÁ, Jan OPPELT, Marek VEČEŘA, Tomáš KAZDA, Radim JANČÁLEK, Michal HENDRYCH, Markéta HERMANOVÁ, P. KASPAROVA, Z. PLESKACOVA, Václav VYBÍHAL, P. FADRUS, M. SMRCKA, R. LAKOMY, R. LIPINA, T. CESAK, Ondřej SLABÝ and Jiří ŠÁNA. Small RNA Sequencing Identifies PIWI-Interacting RNAs Deregulated in Glioblastoma-piR-9491 and piR-12488 Reduce Tumor Cell Colonies In Vitro. Frontiers in Oncology. Lausanne: Frontiers Media S.A., 2021, vol. 11, AUG, p. 1-11. ISSN 2234-943X. Available from: https://dx.doi.org/10.3389/fonc.2021.707017.

PAPEŽ, Jan, Jiří ŠTARHA, Pavel ZERHAU, Denisa PAVLOVSKÁ, Marta JEŽOVÁ, Tomáš JUŘENČÁK, Kateřina SLABÁ, Martin ŠTĚRBA, Arpád KEREKES, Tomáš MERTA, Terézia HALUŠKOVÁ, Hana PÁLOVÁ, Ondřej SLABÝ, Jaroslav ŠTĚRBA and Petr JABANDŽIEV. Spindle Cell Hemangioma and Atypically Localized Juxtaglomerular Cell Tumor in a Patient with Hereditary BRIP1 Mutation: A Case Report. Genes. Basel: MDPI, 2021, vol. 12, No 2, p. 1-8. ISSN 2073-4425. Available from: https://dx.doi.org/10.3390/genes12020220.

FRANEK, Michal, Agata Magdalena KILAR, Petr FOJTÍK, Marie OLSINOVA, Ales BENDA, Vladimír ROTREKL, Martina DVOŘÁČKOVÁ and Jiří FAJKUS. Super-resolution microscopy of chromatin fibers and quantitative DNA methylation analysis of DNA fiber preparations. Journal of Cell Science. Cambridge: Company of Biologists Ltd., 2021, vol. 134, No 15, p. 1-14. ISSN 0021-9533. Available from: https://dx.doi.org/10.1242/jcs.258374.

GADARA, Darshak Chandulal, Kateřina COUFALÍKOVÁ, Juraj BOSÁK, David ŠMAJS and Zdeněk SPÁČIL. Systematic Feature Filtering in Exploratory Metabolomics: Application toward Biomarker Discovery. Analytical chemistry. WASHINGTON: AMER CHEMICAL SOC, 2021, vol. 93, No 26, p. 9103-9110. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.1c00816.

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HISGEN, L., L. ABEL, L. HALLMAIER-WACKER, S. LUERT, A. LAVAZZA, T. TROGU, R. VELARDE, Markéta NOVÁKOVÁ, M. GYURANECZ, E. AGREN, A. BARLOW, David ŠMAJS and S. KNAUF. The distribution of lagomorph syphilis caused by Treponema paraluisleporidarum in Europe. European Journal of Wildlife Research. NEW YORK: Springer, 2021, vol. 67, No 5, p. 1-6. ISSN 1612-4642. Available from: https://dx.doi.org/10.1007/s10344-021-01535-w.

EID, Michal, Paraskevi KAROUSI, Lumír KUNOVSKÝ, Štěpán TUČEK, Dagmar BRANČÍKOVÁ, Zdeněk KALA, Ondřej SLABÝ, Jiří MAYER, Christos K. KONTOS and Jan TRNA. The Role of Circulating MicroRNAs in Patients with Early-Stage Pancreatic Adenocarcinoma. Biomedicines. Basel: MDPI, 2021, vol. 9, No 10, p. 1-17. ISSN 2227-9059. Available from: https://dx.doi.org/10.3390/biomedicines9101468.

MEDRANO, J. V., Ivana AĆIMOVIĆ, A. NAVARRO-GOMEZLECHON, I. NOGUERA, A. PELLICER, M. M. ANDRES and E. NOVELLA-MAESTRE. Timing of spermatogonial stem cell transplantation affects the spermatogenic recovery outcome in mice. IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL. NEW YORK: SPRINGER, 2021, vol. 57, No 1, p. 21-29. ISSN 1071-2690. Available from: https://dx.doi.org/10.1007/s11626-020-00531-9.

PROCHÁZKOVÁ, Dagmar, Romana BORSKÁ, Lenka FAJKUSOVÁ, Petra KONEČNÁ, Eliška HLOUŠKOVÁ, Zdeněk PAVLOVSKÝ, Ondřej SLABÝ and Šárka POSPÍŠILOVÁ. Two Novel Mutations in the JAG1 Gene in Pediatric Patients with Alagille Syndrome: The First Case Series in Czech Republic. Diagnostics. Basel: MDPI, 2021, vol. 11, No 6, p. 1-7. ISSN 2075-4418. Available from: https://dx.doi.org/10.3390/diagnostics11060983.

PAGLIARI, S., Vladimir VINARSKY, Fabiana MARTINO, A. R. PERESTRELO, J. O. DE LA CRUZ, Guido CALUORI, Jan VRBSKY, P. MOZETIC, A. POMPEIANO, A. ZANCLA, Sri Ranjani GANJI, Petr SKLÁDAL, Dan KYTYR, Zbyněk ZDRÁHAL, G. GRASSI, M. SAMPAOLESI, A. RAINER and G. FORTE. YAP-TEAD1 control of cytoskeleton dynamics and intracellular tension guides human pluripotent stem cell mesoderm specification. Cell Death and Differentiation. London: Springer Nature, 2021, vol. 28, No 4, p. 1193-1207. ISSN 1350-9047. Available from: https://dx.doi.org/10.1038/s41418-020-00643-5.

SERNA, I. M. R., I. ROMITO, A. MAUGERI, Oriana LO RE, Sebastiano GIALLONGO, G. MAZZOCCOLI, J. A. OBEN, G. LI VOLTI, T. MAZZA, A. ALISI and Manlio VINCIGUERRA. A Lipidomic Signature Complements Stemness Features Acquisition in Liver Cancer Cells. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2020, vol. 21, No 22, p. 1-17. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms21228452.

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CALUORI, Guido, Eva ODEHNALOVÁ, Tomasz JADCZYK, Martin PEŠL, Iveta PAVLOVÁ, Lucia VALÍKOVÁ, Steffen HOLZINGER, Veronika NOVOTNÁ, Vladimír ROTREKL, Aleš HAMPL, Michal CRHA, Dalibor ČERVINKA and Zdeněk STÁREK. AC Pulsed Field Ablation Is Feasible and Safe in Atrial and Ventricular Settings: A Proof-of-Concept Chronic Animal Study. Frontiers in bioengineering and biotechnology. Laussane: Frontiers Media S.A., 2020, vol. 8, DEC 2020, p. 1-14. ISSN 2296-4185. Available from: https://dx.doi.org/10.3389/fbioe.2020.552357.

MICENKOVÁ, Lenka, Juraj BOSÁK, Stanislav SMATANA, Adam NOVOTNÝ, Eva BUDINSKÁ and David ŠMAJS. Administration of the Probiotic Escherichia coli Strain A0 34/86 Resulted in a Stable Colonization of the Human Intestine During the First Year of Life. Probiotics and Antimicrobial Proteins. New York: Springer New York LLC, 2020, vol. 12, No 2, p. 343-350. ISSN 1867-1306. Available from: https://dx.doi.org/10.1007/s12602-019-09548-3.

BOOTH, James Alexander, Mário ŠPÍREK, Tekle Airgecho LOBIE, Kirsten SKARSTAD, Lumír KREJČÍ and Magnar BJORAS. Antibiotic-induced DNA damage results in a controlled loss of pH homeostasis and genome instability. Scientific reports. London: Nature Publishing Group, 2020, vol. 10, No 1, p. 1-18. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-020-76426-2.

KOHOUTOVA, Darina, Miroslava FORSTLOVA, Paula MORAVKOVA, Jiri CYRANY, Juraj BOSÁK, David ŠMAJS, Stanislav REJCHRT and Jan BURES. Bacteriocin production by mucosal bacteria in current and previous colorectal neoplasia. BMC Cancer. LONDON: BMC, 2020, vol. 20, No 1, p. 1-7. ISSN 1471-2407. Available from: https://dx.doi.org/10.1186/s12885-020-6512-5.

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CHEN, B. Q., M. P. DRAGOMIR, L. FABRIS, R. BAYRAKTAR, E. KNUTSEN, X. LIU, C. Y. TANG, Y. F. LI, T. SHIMURA, Tina CATELA IVKOVIĆ, M. C. DE LOS SANTOS, S. ANFOSSI, M. SHIMIZU, M. Y. SHAH, H. LING, P. SHEN, A. S. MULTANI, B. PARDINI, J. K. BURKS, H.. KATAYAMA, L. C. REINEKE, L. F. HUO, M. SYED, S. M. SONG, M. FERRACIN, E. OKI, B. FROMM, C. IVAN, K. BHUVANESHWAR, Y. GUSEV, K. MIMORI, D. MENTER, S. SEN, T. MATSUYAMA, H. UETAKE, C. VASILESCU, S. KOPETZ, J. PARKER-THORNBURG, A. TAGUCHI, S. M. HANASH, L. GIRNITA, Ondřej SLABÝ, A. GOEL, G. VARANI, M. GAGEA, C. L. LI, J. A. AJANI and G. A. CALIN. The Long Noncoding RNA CCAT2 Induces Chromosomal Instability Through BOP1-AURKB Signaling. Gastroenterology. Philadelphia: W B Saunders co-Elsevier Inc, 2020, vol. 159, No 6, p. 2146-2195. ISSN 0016-5085. Available from: https://dx.doi.org/10.1053/j.gastro.2020.08.018.

KO, Jun Ho, Mi Young SON, Qing ZHOU, Lucia MOLNÁROVÁ, Lambert SONG, Jarmila MLCOUSKOVA, Atis JEKABSONS, Cristina MONTAGNA, Lumír KREJČÍ and Paul HASTY. TREX2 Exonuclease Causes Spontaneous Mutations and Stress-Induced Replication Fork Defects in Cells Expressing RAD51(K133A). Cell Reports. Cambridge: Cell Press, 2020, vol. 33, No 12, p. 1-18. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2020.108543.

MIKALOVÁ, Lenka, Klára JANEČKOVÁ, Markéta NOVÁKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, K. N. HARPER and David ŠMAJS. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Iraq B: A subpopulation of bejel treponemes contains full-length tprF and tprG genes similar to those present in T. p. subsp. pertenue strains. Plos One. San Francisco: Public Library Science, 2020, vol. 15, No 4, p. 1-16. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0230926.

GRILLOVÁ, Linda, Keith JOLLEY, David ŠMAJS and Mathieu PICARDEAU. A public database for the new MLST scheme for Treponema pallidum subsp. pallidum: surveillance and epidemiology of the causative agent of syphilis. PeerJ. London: PEERJ INC, 2019, vol. 6, JAN 9 2019, p. 1-13. ISSN 2167-8359. Available from: https://dx.doi.org/10.7717/peerj.6182.

KOSZTYU, Pavlína, Iva SLANINOVÁ, Barbora VALČÍKOVÁ, Amandine VERLANDE, Petr MÜLLER, Jan PALEČEK and Stjepan ULDRIJAN. A Single Conserved Amino Acid Residue as a Critical Context-Specific Determinant of the Differential Ability of Mdm2 and MdmX RING Domains to Dimerize. Frontiers in Physiology. Lausanne: Frontiers Media, 2019, vol. 10, APR 9 2019, p. 1-14. ISSN 1664-042X. Available from: https://dx.doi.org/10.3389/fphys.2019.00390.

NODA, Angel A., Islay RODRIGUEZ, Linda GRILLOVÁ, Philipp P. BOSSHARD and Reto LIENHARD. Accuracy of PCR and serological testing for the diagnosis of primary syphilis: Both tests are necessary. INTERNATIONAL JOURNAL OF STD & AIDS. LONDON: SAGE PUBLICATIONS LTD, 2019, vol. 30, No 11, p. 1087-1094. ISSN 0956-4624. Available from: https://dx.doi.org/10.1177/0956462419859764.

FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Juraj BOSÁK, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Pavlina KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Iva KOTÁSKOVÁ, Matej LEXA, Jiří LITZMAN, David ŠMAJS and Tomáš FREIBERGER. Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype. Frontiers in Immunology. LAUSANNE: FRONTIERS MEDIA SA, 2019, vol. 10, No 1914, p. 1-14. ISSN 1664-3224. Available from: https://dx.doi.org/10.3389/fimmu.2019.01914.

MRKVOVÁ, Zuzana, Stjepan ULDRIJAN, Antonio POMBINHO, Petr BARTUNEK and Iva SLANINOVÁ. Benzimidazoles Downregulate Mdm2 and MdmX and Activate p53 in MdmX Overexpressing Tumor Cells. Molecules. BASEL: Mayer und Muller, 2019, vol. 24, No 11, p. 1-14. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules24112152.

PANOVSKÝ, Roman, Martin PEŠL, Tomáš HOLEČEK, Jan MÁCHAL, Věra FEITOVÁ, Lenka MRÁZOVÁ, Jana HABERLOVÁ, Alžběta SLABÁ, Pavel VÍT, Veronika STARÁ and Vladimír KINCL. Cardiac profile of the Czech population of Duchenne muscular dystrophy patients: a cardiovascular magnetic resonance study with T1 mapping. ORPHANET JOURNAL OF RARE DISEASES. LONDON: BMC, 2019, vol. 14, No 10, p. 1-10. ISSN 1750-1172. Available from: https://dx.doi.org/10.1186/s13023-018-0986-0.

DOLEJSOVA, Tereza, Albert SOKOL, Juraj BOSÁK, David ŠMAJS, Ivo KONOPASEK, Gabriela MIKUSOVA and Radovan FISER. Colicin U from Shigella boydii Forms Voltage-Dependent Pores. Journal of Bacteriology. Washington: American Society for Microbiology, 2019, vol. 201, No 24, p. 1-16. ISSN 0021-9193. Available from: https://dx.doi.org/10.1128/JB.00493-19.

MICENKOVÁ, Lenka, Juraj BOSÁK, Jiří KUČERA, Matěj HRALA, Tereza DOLEJSOVA, Ondrej ŠEDO, Dirk LINKE, Radovan FISER and David ŠMAJS. Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, JUL 31 2019, p. 1-12. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-47488-8.

CALUORI, Guido, Adam WOJTASZCZYK, Omar YASIN, Martin PEŠL, Jiří WOLF, Silvie BĚLAŠKOVÁ, Michal CRHA, Alan SUGRUE, Vaibhav R. VAIDYA, Niyada NAKSUK, Christopher V. DESIOMONE, Ammar M. KILLU, Deepak PADMANABHAN, Samuel J. ASIRVATHAM and Zdeněk STÁREK. Comparing the incidence of ventricular arrhythmias during epicardial ablation in swine versus canine models. PACE - Pacing and Clinical Electrophysiology. Hoboken: Wiley-Blackwell, 2019, vol. 42, No 7, p. 862-867. ISSN 0147-8389. Available from: https://dx.doi.org/10.1111/pace.13698.

KREJČÍ, Pavel. C-Type Natriuretic Peptide Analogue Therapy in Children with Achondroplasia. New England Journal of Medicine. Waltham: Massachussetts Medical Society, 2019, vol. 381, No 13, p. 1291. ISSN 0028-4793. Available from: https://dx.doi.org/10.1056/NEJMc1910394.

BERESHCHENKO, Oxana, Oriana LO RE, Fedor NIKULENKOV, Sara FLAMINI, Jana KOTAŠKOVÁ, Tommaso MAZZA, Marguerite-Mari LE PANNERER, Marcus BUSCHBECK, Cesarina GIALLONGO, Giuseppe PALUMBO, Giovanni LI VOLTI, Valerio PAZIENZA, Libor ČERVINEK, Carlo RICCARDI, Lumír KREJČÍ, Šárka POSPÍŠILOVÁ, A. Francis STEWART and Manlio VINCIGUERRA. Deficiency and haploinsufficiency of histone macroH2A1.1 in mice recapitulate hematopoietic defects of human myelodysplastic syndrome. CLINICAL EPIGENETICS. LONDON: BMC, 2019, vol. 11, No 1, p. 1-14. ISSN 1868-7075. Available from: https://dx.doi.org/10.1186/s13148-019-0724-z.

GRILLOVÁ, Linda, Jan OPPELT, Lenka MIKALOVÁ, Markéta NOVÁKOVÁ, LLorenzo GIACANI, Anežka NIESNEROVÁ, Angel A. NODA, Ariel E. MECHALY, Petra POSPÍŠILOVÁ, Darina CEJKOVA, Philippe A. GRANGE, Nicolas DUPIN, Radim STRNADEL, Marcus CHEN, Ian DENHAM, Natasha ARORA, Mathieu PICARDEAU, Christopher WESTON, R. Allyn FORSYTH and David ŠMAJS. Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2019, vol. 10, JUL 31 2019, p. 1-14. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2019.01691.

JELÍNKOVÁ, Šárka, Aneta KOHUTOVÁ, Petr FOJTÍK, Miriama KRUTÁ, Aleksandra VILOTIĆ, Martin PEŠL, Jan VRBSKÝ, Renata GAILLYOVÁ, Iveta VALÁŠKOVÁ, Ivan FRÁK, Giancarlo FORTE, Petr DVOŘÁK, Albano MELI, Vladimír ROTREKL, Lenka MARKOVÁ, Tereza JURÁKOVÁ and Alain LACAMPAGNE. Dystrophin Deficiency Leads to Genomic Instability in Human Pluripotent Stem Cells via NO Synthase-Induced Oxidative Stress. Cells. Basel: MDPI, 2019, vol. 8, No 1, p. 1-22. ISSN 2073-4409. Available from: https://dx.doi.org/10.3390/cells8010053.

BOSÁKOVÁ, Michaela, Alexandru NITĂ, Tomáš GREGOR, Miroslav VAŘECHA, Iva GUDERNOVÁ, Bohumil FAFÍLEK, Tomáš BÁRTA, Neha BASHEER, Sara POOVAKULATHU ABRAHAM, Lukáš BÁLEK, Markéta TOMANOVÁ, Jana FIALOVÁ KUČEROVÁ, Juraj BOSÁK, David POTĚŠIL, Jennifer ZIEBA, Jieun SONG, Peter KONIK, Sohyun PARK, Ivan DURAN, Zbyněk ZDRÁHAL, David ŠMAJS, Gert JANSEN, Zheng FU, Hyuk Wan KO, Aleš HAMPL, Lukáš TRANTÍREK, Deborah KRAKOW and Pavel KREJČÍ. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2019, vol. 116, No 10, p. 4316-4325. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1800338116.

NOVÁKOVÁ, Markéta, David NAJT, Lenka PAŠTĚKOVÁ, Marcela KOSTKOVA, Eliška VRBOVÁ, Michal STROUHAL, Annika POSAUTZ, Sascha KNAUF and David ŠMAJS. First report of hare treponematosis seroprevalence of European brown hares (Lepus europaeus) in the Czech Republic: seroprevalence negatively correlates with altitude of sampling areas. BMC Veterinary Research. LONDON: BIOMED CENTRAL LTD, 2019, vol. 15, No 1, p. 1-7. ISSN 1746-6148. Available from: https://dx.doi.org/10.1186/s12917-019-2086-3.

VÁŇOVÁ, Tereza, Jan RAŠKA, Pavel BABICA, Iva SOVADINOVÁ, Michaela BOSÁKOVÁ, Petr DVOŘÁK, Luděk BLÁHA and Vladimír ROTREKL. Freshwater Cyanotoxin Cylindrospermopsin Has Detrimental Stage-specific Effects on Hepatic Differentiation From Human Embryonic Stem Cells. Toxicological sciences. OXFORD: Academic Press, 2019, vol. 168, No 1, p. 241-251. ISSN 1096-6080. Available from: https://dx.doi.org/10.1093/toxsci/kfy293.

NĚMEC, Václav, Michaela HYLSOVÁ, Lukáš MAIER, Jana FLEGEL, Sonja SIEVERS, Slava ZIEGLER, Martin SCHRÖDER, Benedict-Tilman BERGER, Apirat CHAIKUAD, Barbora VALČÍKOVÁ, Stjepan ULDRIJAN, Stanislav DRÁPELA, Karel SOUČEK, Hebert WALDMANN, Stefan KNAPP and Kamil PARUCH. Furo[3,2-b]pyridine: A Privileged Scaffold for Highly Selective Kinase Inhibitors and Effective Modulators of the Hedgehog Pathway. Angewandte Chemie International Edition. Weinheim: Wiley-VCH, 2019, vol. 58, No 4, p. 1062-1066. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.201810312.

GRILLOVÁ, Linda and David ŠMAJS. Genetic Stability of the Typing Loci Used in the Multilocus Sequence Typing and Enhanced CDC Typing of Syphilis Treponemes. Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2019, vol. 46, No 6, p. "E70"-"E70", 1 pp. ISSN 0148-5717. Available from: https://dx.doi.org/10.1097/OLQ.0000000000000981.

KOUTSOULAS, Antonios, Martina ČARNECKÁ, Jiří SLANINA, Jaroslav TOTH and Iva SLANINOVÁ. Characterization of Phenolic Compounds and Antiproliferative Effects of Salvia pomifera and Salvia fruticosa Extracts. Molecules. Basel: MDPI, 2019, vol. 24, No 16, p. 1-18. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules24162921.

MADERANKOVA, Denisa, Lenka MIKALOVÁ, Michal STROUHAL, Simon VADJAK, Ivana KUKLOVA, Petra POSPÍŠILOVÁ, Lenka KRBKOVÁ, Pavlina KOSCOVA, Ivo PROVAZNIK and David ŠMAJS. Identification of positively selected genes in human pathogenic treponemes: Syphilis-, yaws-, and bejel-causing strains differ in sets of genes showing adaptive evolution. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2019, vol. 13, No 6, p. 1-18. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0007463.

KOHUTOVÁ, Aneta, Jan RAŠKA, Miriama KRUTÁ, Monika ŠENEKLOVÁ, Tomáš BÁRTA, Petr FOJTÍK, Tereza JURÁKOVÁ, Christi A. WALTER, Aleš HAMPL, Petr DVOŘÁK and Vladimír ROTREKL. Ligase 3-mediated end-joining maintains genome stability of human embryonic stem cells. Faseb Journal. BETHESDA: FEDERATION AMER SOC EXP BIOL, 2019, vol. 33, No 6, p. 6778-6788. ISSN 0892-6638. Available from: https://dx.doi.org/10.1096/fj.201801877RR.

GIALLONGO, Sebastiano, Oriana LO RE and Manlio VINCIGUERRA. Macro Histone Variants: Emerging Rheostats of Gastrointestinal Cancers. Cancers. BASEL: MDPI, 2019, vol. 11, No 5, p. 1-16. ISSN 2072-6694. Available from: https://dx.doi.org/10.3390/cancers11050676.

VRBOVÁ, Eliška, Linda GRILLOVÁ, Lenka MIKALOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA and David ŠMAJS. MLST typing of Treponema pallidum subsp. pallidum in the Czech Republic during 2004-2017: Clinical isolates belonged to 25 allelic profiles and harbored 8 novel allelic variants. Plos one. San Francisco: Public Library of Science, 2019, vol. 14, No 5, p. 1-15. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0217611.

GRILLOVÁ, Linda, Angel A. NODA, Reto LIENHARD, Orestes BLANCO, Islay RODRIGUEZ and David ŠMAJS. Multilocus Sequence Typing of Treponema pallidum subsp. pallidum in Cuba From 2012 to 2017. The Journal of Infectious Diseases. Chicago: University of Chicago Press, 2019, vol. 219, No 7, p. 1138-1145. ISSN 0022-1899. Available from: https://dx.doi.org/10.1093/infdis/jiy604.

LO RE, Oriana, Andrea MAUGERI, Jana HRUŠKOVÁ, Juraj JAKUBÍK, Jan KUČERA, Julie DOBROVOLNÁ, Jude A. OBEN, Lukáš KUBALA, Adéla DVOŘÁKOVÁ, Milan ČÍŽ and Manlio VINCIGUERRA. Obesity-induced nucleosome release predicts poor cardio-metabolic health. CLINICAL EPIGENETICS. LONDON: BMC, 2019, vol. 12, No 1, p. 1-14. ISSN 1868-7075. Available from: https://dx.doi.org/10.1186/s13148-019-0797-8.

BOSÁK, Juraj, Matěj HRALA, Viktória PIRKOVÁ, Lenka MICENKOVÁ, Alois CIZEK, Jiri SMOLA, Dana KUCEROVA, Zdenka VACKOVA, Eva BUDINSKÁ, Ivana KOLÁČKOVÁ and David ŠMAJS. Porcine pathogenic Escherichia coli strains differ from human fecal strains in occurrence of bacteriocin types. Veterinary Microbiology. AMSTERDAM: Elsevier, 2019, vol. 232, MAY 2019, p. 121-127. ISSN 0378-1135. Available from: https://dx.doi.org/10.1016/j.vetmic.2019.04.003.

JEŽ, Jiří, Guido CALUORI, Tomasz JADCZYK, František LEHAR, Martin PEŠL, Tomáš KULÍK, Silvie BĚLAŠKOVÁ, Václav KUBEŠ and Zdeněk STÁREK. Remotely Navigated Ablations in Ventricle Myocardium Result in Acute Lesion Size Comparable to Force-Sensing Manual Navigation. Circulation: Arrhythmia and Electrophysiology. Philadelphia: Lippincott Williams and Wilkins, 2019, vol. 12, No 10, p. 1-3. ISSN 1941-3149. Available from: https://dx.doi.org/10.1161/CIRCEP.119.007644.

CALUORI, Guido, Jan PŘIBYL, Vratislav CMIEL, Martin PEŠL, Tomas POTOCNAK, Ivo PROVAZNÍK, Petr SKLÁDAL and Vladimír ROTREKL. Simultaneous study of mechanobiology and calcium dynamics on hESC-derived cardiomyocytes clusters. Journal of Molecular Recognition. Hoboken: Wiley, 2019, vol. 32, No 2, p. 1-9. ISSN 0952-3499. Available from: https://dx.doi.org/10.1002/jmr.2760.

CHUMA, Idrissa S., Christian ROOS, Anagaw ATICKEM, Torsten BOHM, D. Anthony COLLINS, Linda GRILLOVÁ, Luisa K. HALLMAIER-WACKER, Rudovick R. KAZWALA, Julius D. KEYYU, Simone LUERT, Ulrich MALOUEKI, Jan OPPELT, Klara J. PETRZELKOVA, Alexander PIEL, Fiona A. STEWART, David ŠMAJS and Sascha KNAUF. Strain diversity of Treponema pallidum subsp. pertenue suggests rare interspecies transmission in African nonhuman primates. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, OCT 2 2019, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-50779-9.

RANJHA, Lepakshi, Maryna LEVIKOVA, Veronika ALTMANNOVÁ, Lumír KREJČÍ and Petr CEJKA. Sumoylation regulates the stability and nuclease activity of Saccharomyces cerevisiae Dna2. COMMUNICATIONS BIOLOGY. NEW YORK: NATURE PUBLISHING GROUP, 2019, vol. 2, MAY 8 2019, p. 1-12. ISSN 2399-3642. Available from: https://dx.doi.org/10.1038/s42003-019-0428-0.

FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Eva NĚMCOVÁ, Hana GROMBIŘÍKOVÁ, Juraj BOSÁK, Michaela ČERNOCHOVÁ, Matej LEXA, David ŠMAJS and Tomáš FREIBERGER. The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery. Frontiers in Microbiology. Lausanne: Frontiers Media SA, 2019, vol. 10, No 821, p. 1-11. ISSN 1664-302X. Available from: https://dx.doi.org/10.3389/fmicb.2019.00821.

SINHA, Dhiraj, Vitali BIALEVICH, Katsiaryna SHAMAYEVA, Alena GUZANOVA, Alexandra SISÁKOVÁ, Eva CSEFALVAY, David REHA, Lumír KREJČÍ, Jannette CAREY, Marie WEISEROVA and Rüdiger ETTRICH. A residue of motif III positions the helicase domains of motor subunit HsdR in restriction-modification enzyme EcoR124I. JOURNAL OF MOLECULAR MODELING. New York: Springer, 2018, vol. 24, No 7, p. 1-11. ISSN 1610-2940. Available from: https://dx.doi.org/10.1007/s00894-018-3722-8.

CALUORI, Guido, Jan PŘIBYL, Martin PEŠL, Jorge OLIVER-DE LA CRUZ, Giorgia NARDONE, Petr SKLÁDAL and Giancarlo FORTE. Advanced and Rationalized Atomic Force Microscopy Analysis Unveils Specific Properties of Controlled Cell Mechanics. Frontiers in Physiology. Lausanne: Frontiers Media, 2018, vol. 9, AUG 17 2018, p. 1-11. ISSN 1664-042X. Available from: https://dx.doi.org/10.3389/fphys.2018.01121.

GOLAN, Martin, Šárka JELÍNKOVÁ, Irena KRATOCHVÍLOVÁ, Petr SKLÁDAL, Martin PEŠL, Vladimír ROTREKL and Jan PŘIBYL. AFM Monitoring the Influence o f Selected Cryoprotectants on Regeneration of Cryopreserved Cells Mechanical Properties. Frontiers in Physiology. Lausanne: Frontiers Media, 2018, vol. 9, No 804, p. 1-10. ISSN 1664-042X. Available from: https://dx.doi.org/10.3389/fphys.2018.00804.

NODA, A.A., Linda GRILLOVÁ, R. LIENHARD, O. BLANCO, I. RODRIGUEZ and David ŠMAJS. Bejel in Cuba: molecular identification of Treponema pallidum subsp endemicum in patients diagnosed with venereal syphilis. Clinical Microbiology and Infection. NJ USA: WILEY-BLACKWELL, 2018, vol. 24, No 11, p. 1-5. ISSN 1198-743X. Available from: https://dx.doi.org/10.1016/j.cmi.2018.02.006.

HŘÍBKOVÁ, Hana, Marta GRABIEC, Dobromila KLEMOVÁ, Iva SLANINOVÁ and Yuh-Man WADELEY. Calcium signaling mediates five types of cell morphological changes to form neural rosettes. Journal of Cell Science. Cambridge: Company of Biologists Ltd., 2018, vol. 131, No 3, p. 1-12. ISSN 0021-9533. Available from: https://dx.doi.org/10.1242/jcs.206896.

MARTINO, Fabiana, Ana R. PERESTRELO, Vladimír VINARSKÝ, Stefania PAGLIARI and Giancarlo FORTE. Cellular Mechanotransduction: From Tension to Function. Frontiers in Physiology. Lausanne: FRONTIERS MEDIA SA, 2018, vol. 9, No 824, p. 1-21. ISSN 1664-042X. Available from: https://dx.doi.org/10.3389/fphys.2018.00824.

BOSÁK, Juraj, Lenka MICENKOVÁ, Matěj HRALA, Katarína POMORSKÁ, Michaela BOSÁKOVÁ, Pavel KREJČÍ, Eduard GÖPFERT, Martin FALDYNA and David ŠMAJS. Colicin F-Y inhibits pathogenic Yersinia enterocolitica in mice. Scientific reports. London: NATURE PUBLISHING GROUP, 2018, vol. 8, No 12242, p. 1-12. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-018-30729-7.

STROUHAL, Michal, Lenka PAŠTĚKOVÁ, Jan HAVIERNIK, Sascha KNAUF, Sylvia BRUISTEN, Gerda T. NOORDHOEK, Jan OPPELT, Darina ČEJKOVÁ and David ŠMAJS. Complete genome sequences of two strains of Treponema pallidum subsp pertenue from Indonesia: Modular structure of several treponemal genes. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2018, vol. 12, No 10, p. 0006867-6886. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0006867.

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KNAUF, Sascha, Simone LUERT, David ŠMAJS, Michal STROUHAL, Idrissa S. CHUMA, Sieghard FRISCHMANN and Mohammed BAKHEIT. Gene target selection for loop-mediated isothermal amplification for rapid discrimination of Treponema pallidum subspecies. PLoS neglected tropical diseases. San Francisco: Public Library of Science, 2018, vol. 12, No 4, p. 1-14. ISSN 1935-2735. Available from: https://dx.doi.org/10.1371/journal.pntd.0006396.

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GHOSH, Somadri, Samuel SCOZZARO, Ana Raque RAMOS, Seprimebastien DELCAMBRE, Cleprimement CHEVALIER, Pavel KREJČÍ and Christophe ERNEUX. Inhibition of SHIP2 activity inhibits cell migration and could prevent metastasis in breast cancer cells. Journal of Cell Science. Cambridge: Company of Biologists Ltd., 2018, vol. 131, No 16, p. 1-12. ISSN 0021-9533. Available from: https://dx.doi.org/10.1242/jcs.216408.

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SUSHAMA JOSE, Shyam, Federico TIDU, Petra LÁZNIČKOVÁ, Tomáš KEPÁK, Kamila BENDICKOVA and Jan FRIČ. The Telomerase Complex Directly Controls Hematopoietic Stem Cell Differentiation and Senescence in an Induced Pluripotent Stem Cell Model of Telomeropathy. FRONTIERS IN GENETICS. LAUSANNE: FRONTIERS MEDIA SA, 2018, vol. 9, No 345, p. 1-19. ISSN 1664-8021. Available from: https://dx.doi.org/10.3389/fgene.2018.00345.