Publication Records

ŠÁMALOVÁ, Markéta, Alesia MELNIKAVA, Kareem ELSAYAD, Alexis PEAUCELLE, Evelína GAHUROVÁ, Jaromír GUMULEC, Ioannis SPYROGLOU, Elena V ZEMLYANSKAYA, Elena V UBOGOEVA, Darina BALKOVÁ, Martin DEMKO, Nicolas BLAVET, Panagiotis ALEXIOU, Vladimir BENES, Gregory MOUILLE and Jan HEJÁTKO. Hormone-regulated expansins: Expression, localization, and cell wall biomechanics in Arabidopsis root growth. Plant Physiology. CARY: OXFORD UNIV PRESS INC, 2024, vol. 194, No 1, p. 209-228. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiad228.

HOFERKOVÁ, Eva, Václav ŠEDA, Soňa CESNÁRIKOVÁ, Jan VERNER, Tomáš LOJA, Květoslava MATULOVÁ, Hana SKUHROVÁ FRANCOVÁ, Eva ONDROUŠKOVÁ, Daniel FILIP, Nicolas BLAVET, Miroslav BOUDNÝ, Gabriela MLADONICKÁ PAVLASOVÁ, Josef VEČEŘA, Laura ONDRIŠOVÁ, Petra PAVELKOVÁ, Kryštof HLAVÁČ, Lenka KOŠŤÁLOVÁ, Androniki MICHAELOU, Šárka POSPÍŠILOVÁ, Jana DORAZILOVÁ, Václav CHOCHOLA, Josef JAROŠ, Michael DOUBEK, Marie JAROŠOVÁ, Aleš HAMPL, Lucy VOJTOVÁ, Leoš KŘEN, Jiří MAYER and Marek MRÁZ. Stromal cells engineered to express T cell factors induce robust CLL cell proliferation in vitro and in PDX co-transplantations allowing the identification of RAF inhibitors as anti-proliferative drug. Leukemia. LONDON: SPRINGERNATURE, 2024. ISSN 0887-6924. Available from: https://dx.doi.org/10.1038/s41375-024-02284-w.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Jakub Paweł PORC, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Boris TICHÝ, Nicolas BLAVET, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Clonal competition and disrupted molecular processes in chronic lymphocytic leukemia. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-048-2.

LUKAVSKY, Peter, Dalibor BLAŽEK, Vojtěch BYSTRÝ, Anna HELÁNOVÁ and Barbora TRUKSOVÁ. RNA Summer School 2023. 2023.

HLUCHÝ, Milan, Pavla GAJDUŠKOVÁ, Igor RUIZ DE LOS MOZOS, Michal RÁJECKÝ, Michael KLUGE, Benedict-Tilman BERGER, Zuzana SLABÁ, David POTĚŠIL, Elena WEISS, Jernej ULE, Zbyněk ZDRÁHAL, Stefan KNAPP, Kamil PARUCH, Caroline C. FRIEDEL and Dalibor BLAŽEK. CDK11 regulates pre-mRNA splicing by phosphorylation ofSF3B1. NATURE. ENGLAND: NATURE PORTFOLIO, 2022, vol. 609, No 7928, p. 829-834. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-022-05204-z.

GAJDUŠKOVÁ, Pavla, I.R. DE LOS MOZOS, Michal RÁJECKÝ, Milan HLUCHÝ, J. ULE and Dalibor BLAŽEK. CDK11 is required for transcription of replication-dependent histone genes. NATURE STRUCTURAL & MOLECULAR BIOLOGY. 2020, vol. 27, No 5, p. 500-510, 33 pp. ISSN 1545-9993. Available from: https://dx.doi.org/10.1038/s41594-020-0406-8.

PILAŘOVÁ, Květa, Jan HERUDEK and Dalibor BLAŽEK. CDK12: cellular functions and therapeutic potential of versatile player in cancer. NAR Cancer. 2020, vol. 2, No 1. ISSN 2632-8674. Available from: https://dx.doi.org/10.1093/narcan/zcaa003.

HLUCHÝ, Milan, David POTĚŠIL, Zbyněk ZDRÁHAL and Dalibor BLAŽEK. Identification of CDK11 interactome. In CEITEC PhD Conference. 2020.

CHIRACKAL MANAVALAN, Anil Paul, Květa PILAŘOVÁ, Michael KLUGE, Koen BARTHOLOMEEUSEN, Michal RÁJECKÝ, Jan OPPELT, PrashantKumar KHIRSARIYA, Kamil PARUCH, Lumír KREJČÍ, Caroline C FRIEDEL and Dalibor BLAŽEK. CDK12 controls G1/S progression by regulating RNAPII processivity at core DNA replication genes. EMBO reports. Hoboken: Wiley-Blackwell, 2019, vol. 20, No 9, p. 1-29. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.201847592.

CHIRACKAL MANAVALAN, Anil Paul, Květa PILAŘOVÁ, M. KLUGE, Koen BARTHOLOMEEUSEN, Jan OPPELT, PrashantKumar KHIRSARIYA, Kamil PARUCH, Lumír KREJČÍ, C. FRIEDEL and Dalibor BLAŽEK. CDK12 kinase activity controls G1/S progression by regulating optimal transcription of core DNA replication genes. In 2018 ASCB | EMBO Annual Meeting. 2018.

JAROŠOVÁ, Petra, Petr PAROULEK, Michal RÁJECKÝ, Veronika RÁJECKÁ, Eva TÁBORSKÁ, R. ERITJA, A. AVINO, S. MAZZINI, R. GARGALLO and Petr TÁBORSKÝ. Naturally occurring quaternary benzo[c]phenanthridine alkaloids selectively stabilize G-quadruplexes. Physical Chemistry Chemical Physics. CAMBRIDGE: Royal Society of Chemistry, 2018, vol. 20, No 33, p. 21772-21782. ISSN 1463-9076. Available from: https://dx.doi.org/10.1039/c8cp02681e.

HANÁKOVÁ, Kateřina, David POTĚŠIL, Ondřej BERNATÍK, Igor ČERVENKA, Matěj RÁDSETOULAL, Vítězslav BRYJA and Zbyněk ZDRÁHAL. SEMIQUANTITATIVE ASSESSMENT OF DISHEVELLED-3 PHOSPHORYLATION STATUS BY MASS SPECTROMETRY. HUNGARIAN JOURNAL OF INDUSTRY AND CHEMISTRY. 2018, vol. 46, No 1, p. 3-6. ISSN 0133-0276. Available from: https://dx.doi.org/10.1515/hjic-2018-0002.

GROCHALOVÁ, Martina, Hana KONEČNÁ, Karel STEJSKAL, David POTĚŠIL, Danuše FRIDRICHOVÁ, Eva SRBOVÁ, Kateřina ORNEROVÁ and Zbyněk ZDRÁHAL. Deep coverage of the beer proteome. Journal of Proteomics. Amsterdam: ELSEVIER SCIENCE BV, 2017, vol. 162, JUN, p. 119-124. ISSN 1874-3919. Available from: https://dx.doi.org/10.1016/j.jprot.2017.05.001.

GREIFENBERG, Ann Katrin, Dana HÖNIG, Květa PILAŘOVÁ, Robert DÜSTER, Koen BARTHOLOMEEUSEN, Christian A. BOSKEN, Kanchan ANAND, Dalibor BLAŽEK and Matthias GEYER. Structural and Functional Analysis of the Cdk13/Cyclin K Complex. Cell Reports. CAMBRIDGE: Cell Press, 2016, vol. 14, No 2, p. 320-331. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2015.12.025.

BLAŽEK, Dalibor, Fernando TEQUE, Carl MACKEWICZ, Matija PETERLIN and Jay A. LEVY. The CD8+cell non-cytotoxic antiviral response affects RNA polymerase II-mediated human immunodeficiency virus transcription in infected CD4+cells. Journal of General Virology. Reading: Society of General Microbiology, 2016, vol. 97, January, p. 220-224. ISSN 0022-1317. Available from: https://dx.doi.org/10.1099/jgv.0.000326.

EKUMI, Kingsley M., Hana PACULOVÁ, Tina LENASI, Vendula POSPÍCHALOVÁ, Christian A. BOESKEN, Jana RYBAŘÍKOVÁ, Vítězslav BRYJA, Matthias GEYER, Dalibor BLAŽEK and Matjaz BARBORIC. Ovarian carcinoma CDK12 mutations misregulate expression of DNA repair genes via deficient formation and function of the Cdk12/CycK complex. Nucleic Acids Research. Oxford, UK: Oxford University Press, 2015, vol. 43, No 5, p. 2575-2589. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv101.

JANOUŠKOVÁ, Eliška, Ivona NEČASOVÁ, Michal ZIMMERMANN, Milan HLUCHÝ and Ctirad HOFR. Human Rap1 Induces TRF2 Release from Telomeric DNA. In EMBO Conference Telomeres, Telomerase and disease. 2014.

BÖSKEN, Christian A., Lucas FARNUNG, Corinna HINTERMAIR, Miriam Merzel SCHACHTER, Karin VOGEL- BACHMAYR, Dalibor BLAŽEK, Kanchan ANAND, Robert P. FISHER, Dirk EICK and Matthias GEYER. The structure and substrate specificity of human Cdk12/Cyclin K. NATURE COMMUNICATIONS. London: Nature Publishing Group, 2014, vol. 5, No 3505, p. "nestránkováno", 14 pp. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/ncomms4505.

ŠMERDOVÁ, Lenka, Jana SVOBODOVÁ, Markéta KABÁTKOVÁ, Jiří KOHOUTEK, Dalibor BLAŽEK, Miroslav MACHALA and Jan VONDRÁČEK. Upregulation of CYP1B1 expression by inflammatory cytokines is mediated by the p38 MAP kinase signal transduction pathway. Carcinogenesis. Oxford: Oxford University Press, 2014, vol. 35, No 11, p. 2534-2543. ISSN 0143-3334. Available from: https://dx.doi.org/10.1093/carcin/bgu190.

ANDRYSÍK, Zdeněk, Jiřina PROCHÁZKOVÁ, Markéta KABÁTKOVÁ, Lenka UMANNOVÁ, Pavlína ŠIMEČKOVÁ, Jiří KOHOUTEK, Alois KOZUBÍK, Miroslav MACHALA and Jan VONDRÁČEK. Aryl hydrocarbon receptor-mediated disruption of contact inhibition is associated with connexin43 downregulation and inhibition of gap junctional intercellular communication. ARCHIVES OF TOXICOLOGY. HEIDELBERG: SPRINGER HEIDELBERG, 2013, vol. 87, No 3, p. 491-503. ISSN 0340-5761. Available from: https://dx.doi.org/10.1007/s00204-012-0963-7.

KOHOUTEK, Jiří and Dalibor BLAŽEK. Cyclin K goes with Cdk12 and Cdk13. Cell Division. London: Biomed Central Ltd., 2012, vol. 7, No 12, p. "nestránkováno", 10 pp. ISSN 1747-1028. Available from: https://dx.doi.org/10.1186/1747-1028-7-12.

BLAŽEK, Dalibor. The cyclin K/Cdk12 complex An emerging new player in the maintenance of genome stability. Cell Cycle. AUSTIN: LANDES BIOSCIENCE, USA, 2012, vol. 11, No 6, p. 1049-1050. ISSN 1538-4101. Available from: https://dx.doi.org/10.4161/cc.11.6.19678.

ŠMAJS, David, Barbora ŠTAUDOVÁ, Lenka MICENKOVÁ, Jan ŠMARDA, Martin VRBA, Alena ŠEVČÍKOVÁ, Zuzana VALIŠOVÁ and Vladana WOZNICOVÁ. Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains. In Acta Microbiologica et Immunologica Hungarica, vol. 58, Supplement : 16th International Congress of the Hungarian Society for Microbiology. 2011. ISSN 1217-8950.

ŠMAJS, David, Lenka MICENKOVÁ, Jan ŠMARDA, M VRBA, A. ŠEVČÍKOVÁ, Z. VALIŠOVÁ and Vladana WOZNICOVÁ. Bacteriocinogeny in E. coli phylogroups: commensal E. coli strains produce more often colicins whereas pathogenic strains microcins. In . International Union of Microbiological Societies 2011 Congress. 2011.

BUREŠ, Jan, David ŠMAJS, Jaroslav KVĚTINA, Miroslav FŐRSTL, Jan ŠMARDA, Darina KOHOUTOVÁ, Martin KUNEŠ, Jiří CYRANY, Ilja TACHECÍ, Stanislav REJCHRT, Jiřina LESNÁ, Viktor VOŘÍŠEK and Marcela KOPÁČOVÁ. Bacteriocinogeny in experimental pigs treated with short-term high-dose indomethacin with or without probiotic bacteria Escherichia coli Nissle 1917. Wourld Journal of Gastroenterology. China, 2011, vol. 17, No 5, p. 609-617. ISSN 1007-9327. Available from: https://dx.doi.org/10.3748/wjg.v17.i5.609.

PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Celogenomová sekvence Treponema pallidum ssp. pallidum kmene Mexico A: Důkaz horizontálního přenosu genů u treponemat? In Genetická konference, Lednice, 14.-16.9.2011. 2011.

BOSÁK, Juraj, Petra KOTRSALOVÁ, Jan ŠMARDA and David ŠMAJS. Colicin FY – a novel bacteriocin of Yersinia frederiksenii. In 15th European Workshop on Bacterial Protein Toxins, Oslo. 2011.

ŠMAJS, David, Marie ZOBANÍKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, Shannon DUGAN-ROCHA, Petra POSPÍŠILOVÁ, Steven J. NORRIS, Tom ALBERT, Xiang QIN, Kym HALLSWORTH-PEPIN, Christian BUHAY, Donna M. MUZNY, Lei CHEN, Richard A. GIBBS and George M. WEINSTOCK. Complete Genome Sequence of Treponema paraluiscuniculi, Strain Cuniculi A: The Loss of Infectivity to Humans Is Associated with Genome Decay. Plos One. 2011, vol. 6, No 5, p. "nestrankovano", 10 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0020415.

MUSILOVÁ, Jana, David ŠMAJS, Anna RAUTANNEN and Tara MILLS. Genetická náchylnost člověka k infekčním chorobám. In Genetická konference, Lednice, 14.-16.9.2011. 2011.

POSPÍŠILOVÁ, Petra and David ŠMAJS. Genetické studie původce syfilis a jejich význam v objasnění virulence a evoluce treponem. In Seminář "Aktuality v mikrobiologii“ Společností pro epidemiologii a mikrobiologii (SEM) ČLS JEP ve spolupráci s Československou společností mikrobiologickou (ČSSM). 2011.

ZOBANÍKOVÁ, Marie, Darina ČEJKOVÁ, Michal STROUHAL, Petra POSPÍŠILOVÁ, George M. WEINSTOCK and David ŠMAJS. Genome differences between Treponema pallidum subsp. pallidum and Treponema pallidum subsp. pertenue. In 4th Congress of European Microbiologists FEMS 2011, Geneva, 26.6. – 30.6. 2011. 2011.

MICENKOVÁ, Lenka and David ŠMAJS. Charakterizácia kmeňov Escherichia coli izolovaných od osôb s ochoreniami tráviaceho traktu. In 55. Studentská vědecká konference LF MU, Brno, 18. 5. 2011. 2011.

MUSILOVÁ, Jana and David ŠMAJS. Identification of syphilis susceptibility locus - a pilot study. In XV. Setkání biochemiků a molekulárních biologů, Brno, 1.-2.11.2011. 2011.

MICENKOVÁ, Lenka and David ŠMAJS. Identifikácia nových typov antibakteriálnych proteínov produkovaných baktériou Escherichia coli. In Genetická konference, Lednice, 14.-16.9.2011. 2011.

PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Kompletní genomová sekvence Treponema pallidum subsp. pallidum kmene Mexico A. In Studentská vědecká konference. 2011. ISBN 978-80-210-5483-7.

MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ, H. ZÁKOUCKÁ, I. KUKLOVÁ and David ŠMAJS. Molecular detection and typing of Treponema pallidum ssp. pallidum in clinical samples based on sequencing of TP0136, TP0548 and 23S rRNA genes. In Acta Microbiologica et Immunologica Hungarica, vol. 58, Supplement : 16th International Congress of the Hungarian Society for Microbiology. 2011. ISSN 1217-8950.

MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, Zuzana VALIŠOVÁ, Vladana WOZNICOVÁ, Hana ZÁKOUCKÁ, L KUKLOVÁ and David ŠMAJS. Molecular detection and typing of Treponema pallidum ssp. pallidum in clinical samples based on sequencing of TP0136, TP0548 and 23S rRNA genes. 2011.

MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ, H ZÁKOUCKÁ, Vladana WOZNICOVÁ and David ŠMAJS. Molecular detection of Treponema pallidum ssp. pallidum in clinical samples: sequencing of TP0136, TP0548 and 23S rRNA genes. In International Union of Microbiological Societies 2011 Congress. 2011.

MIKALOVÁ, Lenka, Petra POSPÍŠILOVÁ, Magdalena FLASAROVÁ and David ŠMAJS. Molekulární detekce, kmenová typizace a stanovení makrolidové rezistence původce syfilis – Treponema pallidum subsp. pallidum v klinickém materiálu. In Rutinní analýza nukleových kyselin molekulárně biologickými technikami RANK 2011. 2011.

BOSÁK, Juraj, David ŠMAJS, Petra LAIBLOVÁ, Daniela DĚDIČOVÁ and Jan ŠMARDA. Nový kolicín rodu Yersinia. In Genetická konference, Lednice, 14.-.16.9.2011. 2011.

BLAŽEK, Dalibor, Jiří KOHOUTEK, Koen BARTHOLOMEEUSEN, Eric JOHANSEN, Petra HULINKOVÁ, Zeping P. LUO, Peter CIMERMANCIC, Jernej ULE and Matija B. PETERLIN. The Cyclin K/Cdk12 complex maintains genomic stability via regulation of expression of DNA damage response genes. Genes & Development. Spojené státy americké: Cold Spring Harbor Laboratory Press, 2011, vol. 25, No 20, p. 2158-2172. ISSN 0890-9369. Available from: https://dx.doi.org/10.1101/gad.16962311.

ŠMAJS, David, Lenka MIKALOVÁ, Darina ČEJKOVÁ, Michal STROUHAL, Marie ZOBANÍKOVÁ, Petra POSPÍŠILOVÁ, Steven J. NORRIS and George M. WEINSTOCK. Whole Genome Analyses of Treponemes: New Targets for Strain- and Subspecies- Specific Molecular Diagnostics. In Syphilis - Recognition, Description and Diagnosis. Rijeka (Croatia): InTech, 2011, p. 19-34. Infectious Diseases. ISBN 978-953-307-554-9.

PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Whole genome sequence of treponema pallidum subspecies pallidum strain Mexico A. In XV. Setkání biochemiků a molekulárních biologů, Brno, 1.-2.11.2011. 2011.

PĚTROŠOVÁ, Helena, Petra POSPÍŠILOVÁ, Marie ZOBANÍKOVÁ, Lenka MIKALOVÁ and David ŠMAJS. Whole genome sequence of Treponema pallidum subspecies pallidum strain Mexico A. In XV. Setkání biochemiků a molekulárních biologů. 2011. ISBN 978-80-210-5594-0.

ČEJKOVÁ, Darina, Marie ZOBANÍKOVÁ, Lei CHEN, Petra POSPÍŠILOVÁ, Michal STROUHAL, Xiang QIN, Lenka MIKALOVÁ, David ŠMAJS and George M. WEINSTOCK. Whole genome sequences of yaws spirochetes shed more light on Treponema pallidum genomics. In Cold Spring Harbor Laboratory. 2011.